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Laboratory Mouse

Mus musculus

Welcome to the Mouse Portal within RGD. This portal contains links to data related to the laboratory mouse, Mus musculus, and to tools that mouse researchers can use to find and analyze that data. Please feel free to contact us with suggestions for additional data or tools that would help advance your research.

“The mouse, Mus musculus, is a small mammal of the order Rodentia, characteristically having a pointed snout, small rounded ears, and a long naked or almost hairless tail. It is one of the most abundant species of the genus Mus. Although a wild animal, the mouse mainly lives in association with humans. The mouse has been domesticated as the pet or fancy mouse, and as the laboratory mouse, which is one of the most important model organisms in biology and medicine.”

Source: Ensembl

Mouse Data at RGD

Ontomate: Concept-Based Literature Search

Ontomate: pre-filtered for Mouse literature

Mouse QTLs at RGD

Mouse Genes at RGD

RGD Disease Annotations

RGD’s Pathway Annotations

RGD’s Pathway Diagrams

Gene Ontology Annotations

RGD’s Mouse Download Site

Tools at RGD for Mouse Data Analysis

Mouse JBrowse
Genome Browser

Object List Generator & Analyzer

Multi Ontology Enrichment Tool

GA Tool:
Annotation Search and Export

Gene and Ortholog Location Finder

InterViewer – Protein Interactions

External Resources for Mouse Research

Mouse Genome Informatics

Mouse Phenome Database

International Mouse Phenotyping Consortium

Knockout Mouse Project

Mutant Mouse Resource and Research Center

The Jackson Laboratory

Mouse Genome and Gene Resources

RGD’s Genome Information
Page for Mouse

Mouse Taxonomy Page

Mouse Species Browser

Mouse Genome Page

GRCm39 Assembly Page

Ensembl’s Mouse
Information Page

Mouse Assembly, Gene
Annotation and Statistics
at Ensembl



RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.