Colec12 (collectin sub-family member 12) - Rat Genome Database

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Gene: Colec12 (collectin sub-family member 12) Rattus norvegicus
Analyze
Symbol: Colec12
Name: collectin sub-family member 12
RGD ID: 735039
Description: Predicted to enable low-density lipoprotein particle binding activity; pattern recognition receptor activity; and scavenger receptor activity. Predicted to be involved in several processes, including cellular response to exogenous dsRNA; phagocytosis, recognition; and toll-like receptor 3 signaling pathway. Predicted to act upstream of with a positive effect on plasma membrane raft organization. Predicted to act upstream of or within immune response. Predicted to be located in membrane. Predicted to be part of collagen trimer. Orthologous to human COLEC12 (collectin subfamily member 12); PARTICIPATES IN phagocytosis pathway; INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: CL-P1; collectin placenta protein 1; collectin-12; MGC114569; nurse cell scavenger receptor 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8181,005,787 - 1,193,455 (+)NCBIGRCr8
mRatBN7.218732,950 - 920,620 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl18732,950 - 920,618 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx18960,785 - 1,142,019 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0181,748,614 - 1,929,841 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.018962,684 - 1,143,918 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.018867,048 - 1,054,047 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl18867,048 - 1,052,606 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.018910,945 - 1,096,505 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.418996,297 - 1,188,288 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1181,162,605 - 1,163,261 (+)NCBI
Celera18629,852 - 811,837 (+)NCBICelera
Cytogenetic Map18p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1-naphthyl isothiocyanate  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
8-Br-cAMP  (ISO)
all-trans-retinoic acid  (ISO)
allethrin  (EXP)
astemizole  (EXP)
azathioprine  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (ISO)
beta-naphthoflavone  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
butanal  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
ciguatoxin CTX1B  (ISO)
cyhalothrin  (EXP)
cypermethrin  (EXP)
cytarabine  (ISO)
diazinon  (EXP)
dimethylarsinic acid  (EXP)
diquat  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
entinostat  (ISO)
fenvalerate  (EXP)
folic acid  (ISO)
formaldehyde  (ISO)
furan  (EXP)
gentamycin  (EXP)
inulin  (ISO)
L-methionine  (ISO)
lead(0)  (ISO)
lipopolysaccharide  (ISO)
manganese(II) chloride  (EXP)
melatonin  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
N-nitrosodiethylamine  (EXP)
N-nitrosodimethylamine  (EXP)
oxaliplatin  (EXP)
ozone  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenylephrine  (EXP)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
progesterone  (ISO)
propanal  (ISO)
pyrethrins  (EXP)
quercetin  (ISO)
rofecoxib  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenite  (ISO)
sodium aurothiomalate  (ISO)
succimer  (ISO)
sunitinib  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (ISO)
thapsigargin  (ISO)
toluene  (EXP)
topotecan  (EXP)
trichostatin A  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
3. Molecular cloning of a mouse scavenger receptor with C-type lectin (SRCL)(1), a novel member of the scavenger receptor family. Nakamura K, etal., Biochim Biophys Acta 2001 Nov 11;1522(1):53-8.
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11564734   PMID:12477932   PMID:23376485   PMID:25204797   PMID:31344978  


Genomics

Comparative Map Data
Colec12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8181,005,787 - 1,193,455 (+)NCBIGRCr8
mRatBN7.218732,950 - 920,620 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl18732,950 - 920,618 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx18960,785 - 1,142,019 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0181,748,614 - 1,929,841 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.018962,684 - 1,143,918 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.018867,048 - 1,054,047 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl18867,048 - 1,052,606 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.018910,945 - 1,096,505 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.418996,297 - 1,188,288 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1181,162,605 - 1,163,261 (+)NCBI
Celera18629,852 - 811,837 (+)NCBICelera
Cytogenetic Map18p13NCBI
COLEC12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3818316,737 - 500,701 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl18316,737 - 500,722 (-)EnsemblGRCh38hg38GRCh38
GRCh3718316,737 - 500,701 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3618309,356 - 490,685 (-)NCBINCBI36Build 36hg18NCBI36
Build 3418309,355 - 490,685NCBI
Celera18194,506 - 375,871 (-)NCBICelera
Cytogenetic Map18p11.32NCBI
HuRef18279,136 - 440,551 (-)NCBIHuRef
CHM1_118318,475 - 499,849 (-)NCBICHM1_1
T2T-CHM13v2.018470,846 - 654,740 (-)NCBIT2T-CHM13v2.0
Colec12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39189,707,648 - 9,877,995 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl189,707,595 - 9,882,644 (+)EnsemblGRCm39 Ensembl
GRCm38189,707,648 - 9,877,995 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl189,707,595 - 9,882,644 (+)EnsemblGRCm38mm10GRCm38
MGSCv37189,707,646 - 9,877,993 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36189,707,675 - 9,877,990 (+)NCBIMGSCv36mm8
Celera189,737,717 - 9,907,507 (+)NCBICelera
Cytogenetic Map18A1NCBI
cM Map184.91NCBI
Colec12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554029,468,421 - 9,614,286 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554029,445,419 - 9,614,956 (+)NCBIChiLan1.0ChiLan1.0
COLEC12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21737,982,247 - 38,178,247 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11823,674,649 - 23,871,759 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01813,819,575 - 14,001,383 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11817,461,650 - 17,641,404 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1817,461,678 - 17,640,721 (+)Ensemblpanpan1.1panPan2
COLEC12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1767,192,191 - 67,373,524 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl767,193,626 - 67,372,755 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha766,645,862 - 66,826,568 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0767,257,518 - 67,438,465 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl767,258,955 - 67,438,386 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1766,935,179 - 67,115,867 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0766,946,113 - 67,126,853 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0767,248,426 - 67,429,208 (-)NCBIUU_Cfam_GSD_1.0
Colec12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494463,465,877 - 63,646,996 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936550169,084 - 350,501 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936550169,084 - 350,209 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COLEC12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6105,808,221 - 106,007,730 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16105,808,157 - 106,000,197 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
COLEC12
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11859,701,131 - 59,884,445 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1859,699,348 - 59,884,461 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605034,490,498 - 34,675,112 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Colec12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477010,859,205 - 11,013,175 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477010,860,097 - 11,136,478 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Colec12
1256 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:258
Count of miRNA genes:172
Interacting mature miRNAs:184
Transcripts:ENSRNOT00000065494
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125758124Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125758124Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat

Markers in Region
D18Mit12  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218805,014 - 805,250 (+)MAPPERmRatBN7.2
Rnor_6.018938,503 - 938,738NCBIRnor6.0
Rnor_5.018982,400 - 982,635UniSTSRnor5.0
RGSC_v3.4181,069,989 - 1,070,224UniSTSRGSC3.4
RGSC_v3.4181,069,988 - 1,070,224RGDRGSC3.4
RGSC_v3.1181,069,989 - 1,070,224RGD
Celera18695,687 - 695,922UniSTS
RH 3.4 Map1827.7UniSTS
RH 3.4 Map1827.7RGD
RH 2.0 Map18834.3RGD
Cytogenetic Map18p13UniSTS
D18Rat114  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218838,348 - 838,504 (+)MAPPERmRatBN7.2
Rnor_6.018971,826 - 971,979NCBIRnor6.0
Rnor_5.0181,015,723 - 1,015,876UniSTSRnor5.0
RGSC_v3.4181,104,767 - 1,104,921RGDRGSC3.4
RGSC_v3.4181,104,768 - 1,104,921UniSTSRGSC3.4
RGSC_v3.1181,104,768 - 1,104,921RGD
Celera18729,300 - 729,459UniSTS
RH 3.4 Map1831.5UniSTS
RH 3.4 Map1831.5RGD
RH 2.0 Map18840.8RGD
SHRSP x BN Map180.23RGD
Cytogenetic Map18p13UniSTS
D2Rat367  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218893,930 - 894,144 (+)MAPPERmRatBN7.2
mRatBN7.22246,974,238 - 246,974,460 (+)MAPPERmRatBN7.2
Rnor_6.0181,026,832 - 1,027,045NCBIRnor6.0
Rnor_6.02264,265,266 - 264,265,491NCBIRnor6.0
Rnor_5.0181,070,729 - 1,070,942UniSTSRnor5.0
Rnor_5.02282,393,650 - 282,393,875UniSTSRnor5.0
RGSC_v3.42256,054,885 - 256,055,110UniSTSRGSC3.4
RGSC_v3.4181,161,596 - 1,161,809UniSTSRGSC3.4
RGSC_v3.1181,161,167 - 1,161,810RGD
Celera2238,774,849 - 238,775,080UniSTS
Celera18785,146 - 785,359UniSTS
SHRSP x BN Map2112.4598RGD
SHRSP x BN Map2112.4598UniSTS
Cytogenetic Map18p13UniSTS
D18Chm30  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.218838,607 - 838,796 (+)MAPPERmRatBN7.2
Rnor_6.018972,083 - 972,267NCBIRnor6.0
Rnor_6.018971,885 - 972,267NCBIRnor6.0
Rnor_5.0181,015,782 - 1,016,164UniSTSRnor5.0
Rnor_5.0181,015,980 - 1,016,164UniSTSRnor5.0
RGSC_v3.4181,105,025 - 1,105,209UniSTSRGSC3.4
RGSC_v3.4181,104,827 - 1,105,209UniSTSRGSC3.4
Celera18729,563 - 729,747UniSTS
Celera18729,359 - 729,747UniSTS
Cytogenetic Map18p13UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000065494   ⟹   ENSRNOP00000059663
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl18732,950 - 920,618 (+)Ensembl
Rnor_6.0 Ensembl18867,048 - 1,052,606 (+)Ensembl
RefSeq Acc Id: NM_001025721   ⟹   NP_001020892
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8181,005,787 - 1,193,455 (+)NCBI
mRatBN7.218732,950 - 920,620 (+)NCBI
Rnor_6.018867,048 - 1,052,608 (+)NCBI
Rnor_5.018910,945 - 1,096,505 (+)NCBI
RGSC_v3.418996,297 - 1,188,288 (+)RGD
Celera18629,852 - 811,837 (+)RGD
Sequence:
Protein Sequences
Protein RefSeqs NP_001020892 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH97495 (Get FASTA)   NCBI Sequence Viewer  
  BAD06456 (Get FASTA)   NCBI Sequence Viewer  
  EDL86660 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000059663.1
  ENSRNOP00055011460
  ENSRNOP00060010264
  ENSRNOP00065006844
GenBank Protein Q4V885 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001020892   ⟸   NM_001025721
- UniProtKB: Q76LC3 (UniProtKB/Swiss-Prot),   Q4V885 (UniProtKB/Swiss-Prot),   A6KND5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000059663   ⟸   ENSRNOT00000065494
Protein Domains
C-type lectin   Collagen-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q4V885-F1-model_v2 AlphaFold Q4V885 1-742 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13700626
Promoter ID:EPDNEW_R11150
Type:initiation region
Name:Colec12_1
Description:collectin sub-family member 12
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.018867,000 - 867,060EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:735039 AgrOrtholog
BioCyc Gene G2FUF-8426 BioCyc
Ensembl Genes ENSRNOG00000016366 Ensembl, UniProtKB/Swiss-Prot
  ENSRNOG00055008431 UniProtKB/Swiss-Prot
  ENSRNOG00060008149 UniProtKB/Swiss-Prot
  ENSRNOG00065006244 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000065494.2 UniProtKB/Swiss-Prot
  ENSRNOT00055014269 UniProtKB/Swiss-Prot
  ENSRNOT00060013481 UniProtKB/Swiss-Prot
  ENSRNOT00065009534 UniProtKB/Swiss-Prot
Gene3D-CATH 3.10.100.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7461783 IMAGE-MGC_LOAD
InterPro C-type_lectin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C-type_lectin-like/link_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C-type_lectin/snaclec_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C-type_lectin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CD209-like_CTLD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Collagen UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CTDL_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:361289 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:114569 IMAGE-MGC_LOAD
NCBI Gene 361289 ENTREZGENE
PANTHER COLLECTIN-12 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Collagen UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lectin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Colec12 PhenoGen
PROSITE C_TYPE_LECTIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C_TYPE_LECTIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000016366 RatGTEx
  ENSRNOG00055008431 RatGTEx
  ENSRNOG00060008149 RatGTEx
  ENSRNOG00065006244 RatGTEx
SMART CLECT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP C-type lectin-like UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A6KND5 ENTREZGENE, UniProtKB/TrEMBL
  COL12_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q76LC3 ENTREZGENE
UniProt Secondary Q76LC3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-10 Colec12  collectin sub-family member 12      Symbol and Name status set to approved 1299863 APPROVED