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Gene: Agpat4 (1-acylglycerol-3-phosphate O-acyltransferase 4) Rattus norvegicus

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Symbol:

Agpat4

Name:

1-acylglycerol-3-phosphate O-acyltransferase 4

RGD ID:

619916

Description:

Predicted to enable 1-acylglycerol-3-phosphate O-acyltransferase activity. Predicted to be involved in phospholipid metabolic process. Predicted to be located in endoplasmic reticulum. Predicted to be active in endomembrane system and mitochondrial outer membrane. Orthologous to human AGPAT4 (1-acylglycerol-3-phosphate O-acyltransferase 4); PARTICIPATES IN glycerolipid metabolic pathway; glycerophospholipid metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; acetamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

1-acyl-sn-glycerol-3-phosphate acyltransferase delta; 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase delta); 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, delta); 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta); 1-AGP acyltransferase 4; 1-AGPAT 4; LPAAT-delta; lysophosphatidic acid acyltransferase delta; MGC93227

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AGPAT4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Agpat4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Agpat4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AGPAT4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AGPAT4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Agpat4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AGPAT4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AGPAT4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Agpat4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Agpat4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	PRSS38 (serine protease 38)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Agpat4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	AGPAT4 (1-acylglycerol-3-phosphate O-acyltransferase 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	agpat4 (1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta))	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Agpat3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Agpat4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YDR018C	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	YDR018C	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoInspector\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	CST26	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	CST26	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoInspector\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	agpat4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	agpat4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	51,075,081 - 51,181,548 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	51,075,081 - 51,180,976 (-)	Ensembl				GRCr8
mRatBN7.2	1	48,525,131 - 48,633,798 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	48,527,323 - 48,633,345 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	49,218,910 - 49,324,839 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	55,203,981 - 55,309,606 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	49,294,411 - 49,400,333 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	48,716,094 - 48,826,292 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	48,719,633 - 48,825,364 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	50,929,133 - 51,035,499 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	42,986,809 - 43,096,390 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	44,317,112 - 44,422,634 (-)	NCBI		Celera
RGSC_v3.1	1	42,989,754 - 43,099,335 (-)	NCBI
Cytogenetic Map	1	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

2-methylcholine (ISO)

4,4'-sulfonyldiphenol (EXP,ISO)

4-\{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino\}benzoic acid (ISO)

4-hydroxyphenyl retinamide (ISO)

acetamide (EXP)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

benzo[a]pyrene diol epoxide I (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

bisphenol F (EXP)

Butylbenzyl phthalate (EXP)

cadmium dichloride (ISO)

CGP 52608 (ISO)

choline (ISO)

cisplatin (EXP,ISO)

copper(II) chloride (ISO)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

Cuprizon (EXP)

dexamethasone (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

folic acid (ISO)

fulvestrant (ISO)

furan (EXP)

gentamycin (EXP)

GSK-J4 (ISO)

indometacin (EXP)

irinotecan (EXP)

L-methionine (ISO)

methylmercury chloride (ISO)

okadaic acid (ISO)

oxaliplatin (EXP)

paracetamol (ISO)

potassium chromate (ISO)

progesterone (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

tetracycline (ISO)

thioacetamide (EXP)

topotecan (EXP)

triptonide (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

CDP-diacylglycerol biosynthetic process (IEA)

lipid metabolic process (IEA)

phospholipid biosynthetic process (IEA)

phospholipid metabolic process (IEA,ISO)

Cellular Component

endomembrane system (IBA)

endoplasmic reticulum (IEA,ISO,ISS)

endoplasmic reticulum membrane (IEA)

mitochondrial outer membrane (IBA,IEA,ISO)

Molecular Function

1-acylglycerol-3-phosphate O-acyltransferase activity (IBA,IEA,ISO,ISS)

acyltransferase activity (IEA)

lysophosphatidic acid acyltransferase activity (IEA,ISO)

protein binding (ISO)

transferase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

glycerolipid metabolic pathway (IEA)

glycerophospholipid metabolic pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
4.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
5.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
6.	GOA pipeline	RGD automated data pipeline
7.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
9.	Information Derived from GenBank Report	RGD, Sept. 2003

Additional References at PubMed

PMID:12477932	PMID:15489334	PMID:24333445	PMID:26417903

Genomics

Comparative Map Data

Agpat4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	51,075,081 - 51,181,548 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	1	51,075,081 - 51,180,976 (-)	Ensembl				GRCr8
mRatBN7.2	1	48,525,131 - 48,633,798 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	48,527,323 - 48,633,345 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	1	49,218,910 - 49,324,839 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	55,203,981 - 55,309,606 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	49,294,411 - 49,400,333 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	48,716,094 - 48,826,292 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	48,719,633 - 48,825,364 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	1	50,929,133 - 51,035,499 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	1	42,986,809 - 43,096,390 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	1	44,317,112 - 44,422,634 (-)	NCBI		Celera
RGSC_v3.1	1	42,989,754 - 43,099,335 (-)	NCBI
Cytogenetic Map	1	q11	NCBI

AGPAT4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	161,129,967 - 161,274,061 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	161,129,967 - 161,274,095 (-)	Ensembl			hg38	GRCh38
GRCh37	6	161,550,999 - 161,695,093 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	161,471,047 - 161,615,097 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	6	161,527,517 - 161,665,448	NCBI
Celera	6	162,280,457 - 162,424,409 (-)	NCBI		Celera
Cytogenetic Map	6	q26	NCBI
HuRef	6	159,006,418 - 159,150,408 (-)	NCBI		HuRef
CHM1_1	6	161,813,702 - 161,957,597 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	162,488,365 - 162,632,384 (-)	NCBI		T2T-CHM13v2.0

Agpat4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	12,337,372 - 12,438,536 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	12,337,591 - 12,438,532 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	17	12,118,485 - 12,219,649 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	12,118,704 - 12,219,645 (+)	Ensembl			mm10	GRCm38
MGSCv37	17	12,312,150 - 12,412,506 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	17	11,962,642 - 12,062,998 (+)	NCBI		MGSCv36	mm8
Celera	17	12,147,922 - 12,252,652 (+)	NCBI		Celera
Cytogenetic Map	17	A1	NCBI
cM Map	17	8.33	NCBI

Agpat4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955439	20,050,619 - 20,132,893 (+)	Ensembl
ChiLan1.0	NW_004955439	20,050,619 - 20,132,893 (+)	NCBI	ChiLan1.0	ChiLan1.0

AGPAT4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	181,305,186 - 181,450,074 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	179,210,769 - 179,355,480 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	159,075,360 - 159,219,887 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	164,085,970 - 164,229,696 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	164,092,522 - 164,229,696 (-)	Ensembl			panPan2	panpan1.1

AGPAT4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	49,709,437 - 49,837,848 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	49,709,741 - 49,837,091 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	50,552,643 - 50,680,914 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	49,894,606 - 50,022,389 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	49,894,612 - 50,023,044 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	49,776,903 - 49,904,869 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	49,647,989 - 49,776,147 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	50,264,213 - 50,392,536 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Agpat4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	144,730,179 - 144,826,056 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936489	11,981,969 - 12,042,447 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936489	11,982,488 - 12,078,132 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AGPAT4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	6,772,417 - 6,883,551 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	1	6,761,734 - 6,883,555 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	8,330,534 - 8,440,346 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AGPAT4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	88,634,100 - 88,782,371 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	88,640,548 - 88,781,702 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	60,965,050 - 61,111,779 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Agpat4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624855	2,046,014 - 2,161,398 (+)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624855	2,046,000 - 2,185,729 (+)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Agpat4
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	2	190,859,010 - 190,962,236 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Agpat4
816 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	66
Count of miRNA genes:	55
Interacting mature miRNAs:	63
Transcripts:	ENSRNOT00000024213
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331732	Srn4	Serum renin concentration QTL 4	4.467		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	1	43457837	87558729	Rat
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	7746118	52746118	Rat
1357397	Bw41	Body weight QTL 41	4.19	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	1	29409279	74409279	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
4889929	Bss87	Bone structure and strength QTL 87	6.7		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	46302615	91302615	Rat
1331792	Rf29	Renal function QTL 29	4.589		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	1	43457837	87558729	Rat
2313062	Bmd73	Bone mineral density QTL 73	3.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	46302615	91302615	Rat
8552900	Pigfal1	Plasma insulin-like growth factor 1 level QTL 1	7.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	43509952	88509952	Rat
1354643	Foco2	Food consumption QTL 2	7.17	0.0001	eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	1	42122968	87122968	Rat
2313065	Bss67	Bone structure and strength QTL 67	3.1	0.0001	tibia area (VT:1000281)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
7421626	Bp360	Blood pressure QTL 360		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	6941022	51941022	Rat
1357401	Bw43	Body weight QTL 43	3.75		body mass (VT:0001259)	body weight (CMO:0000012)	1	6909353	51909353	Rat
2313069	Bss68	Bone structure and strength QTL 68	2.9	0.0001	tibia size trait (VT:0100001)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
631494	Bp95	Blood pressure QTL 95	40	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	17315378	51816258	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
2313075	Bss66	Bone structure and strength QTL 66	3.4	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	46302615	91302615	Rat
5684998	Bss101	Bone structure and strength QTL 101	3.6		tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	1	6909353	51909353	Rat
5684999	Bss102	Bone structure and strength QTL 102	5.5	7e-07	tibia strength trait (VT:1000284)	tibia stiffness (CMO:0001735)	1	6909353	51909353	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
1331778	Rf28	Renal function QTL 28	4.66		urine potassium amount (VT:0010539)	urine potassium excretion rate (CMO:0000761)	1	43457837	87558729	Rat
2313077	Bss69	Bone structure and strength QTL 69	3.5	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	46302615	91302615	Rat
1578756	Iddm22	Insulin dependent diabetes mellitus QTL 22	2.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	20508326	65508326	Rat
1331785	Rf27	Renal function QTL 27	4.643		urine sodium amount (VT:0006274)	urine sodium level (CMO:0000129)	1	30708375	87558729	Rat
631508	Sald1	Serum aldosterone level QTL 1	3.7		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	1	11684464	56684464	Rat
1300172	Bp172	Blood pressure QTL 172	3.56		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	34565726	79565726	Rat
4889451	Eae29	Experimental allergic encephalomyelitis QTL 29	5.51		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	1	7746121	52746121	Rat
1558642	Prcr2	Prostate cancer resistance QTL 2	4.3		prostate integrity trait (VT:0010571)	area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)	1	10379492	55379492	Rat
2313092	Bmd72	Bone mineral density QTL 72	2.5	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	46302615	91302615	Rat
2313097	Bss70	Bone structure and strength QTL 70	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
9589820	Insglur3	Insulin/glucose ratio QTL 3	10.75	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	1	43509952	88509952	Rat
1354599	Bw29	Body weight QTL 29	3.46	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	42122968	87122968	Rat
2302038	Pia31	Pristane induced arthritis QTL 31	5.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	1	12820494	57820494	Rat
4889919	Bss86	Bone structure and strength QTL 86	4.1		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	1	46302615	91302615	Rat
8552948	Pigfal11	Plasma insulin-like growth factor 1 level QTL 11	4.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	43509952	88509952	Rat
634353	Rends2	Renal damage susceptibility QTL 2		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	1	20656420	65656420	Rat

Markers in Region

RH135066

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	48,527,410 - 48,527,604 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	48,719,721 - 48,719,914	NCBI	Rnor6.0
Rnor_5.0	1	51,035,217 - 51,035,410	UniSTS	Rnor5.0
RGSC_v3.4	1	42,986,898 - 42,987,091	UniSTS	RGSC3.4
Celera	1	44,317,201 - 44,317,394	UniSTS
RH 3.4 Map	1	572.9	UniSTS
Cytogenetic Map	1	q11	UniSTS

BF415643

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	48,584,748 - 48,584,917 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	48,776,921 - 48,777,089	NCBI	Rnor6.0
Rnor_5.0	1	50,978,455 - 50,978,623	UniSTS	Rnor5.0
RGSC_v3.4	1	43,045,145 - 43,045,313	UniSTS	RGSC3.4
Celera	1	44,374,346 - 44,374,514	UniSTS
RH 3.4 Map	1	586.7	UniSTS
Cytogenetic Map	1	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	164	91	90	59	92	59	6	356	192	11	143	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_133406	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006227857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272836	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB067572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC135026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC086992	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474059	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000024213 ⟹ ENSRNOP00000024213

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	51,075,082 - 51,180,971 (-)	Ensembl
mRatBN7.2 Ensembl	1	48,527,325 - 48,633,238 (-)	Ensembl
Rnor_6.0 Ensembl	1	48,719,633 - 48,825,364 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000082958 ⟹ ENSRNOP00000069883

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	51,075,081 - 51,180,976 (-)	Ensembl
mRatBN7.2 Ensembl	1	48,527,323 - 48,633,345 (-)	Ensembl
Rnor_6.0 Ensembl	1	48,719,942 - 48,797,631 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000117069 ⟹ ENSRNOP00000094231

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	1	51,075,082 - 51,180,971 (-)	Ensembl
mRatBN7.2 Ensembl	1	48,527,325 - 48,633,238 (-)	Ensembl

RefSeq Acc Id:

NM_133406 ⟹ NP_596897

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	51,075,081 - 51,180,971 (-)	NCBI
mRatBN7.2	1	48,527,322 - 48,633,223 (-)	NCBI
Rnor_6.0	1	48,719,632 - 48,825,378 (-)	NCBI
Rnor_5.0	1	50,929,133 - 51,035,499 (+)	NCBI
RGSC_v3.4	1	42,986,809 - 43,096,390 (-)	RGD
Celera	1	44,317,112 - 44,422,634 (-)	RGD

Sequence:

show sequence

CTCGCTTTTTCTTTCCAGTGTTGGCTGACTTACAGCTTCTCTAAAGTAGAGGCAGTTTCTGAAC
CCTAGGTTCCTGCCTCGCAGTTCTGGCTAGTGAGCACCAATGCAAAGAGCTGCCCGGAGCGAGA
CGGTTTCCTGAGCCCCGGATCTTTCTCCCTTCTGGAACTATTCCGCCATGCGTACTTGTCTCTT
GAGAATCCCCGCATCATGGACCTCATCGGGCTGCTGAAGTCCCAGTTTCTGTGTCACCTGGTCT
TCTGCTACGTGTTCATCGCCTCCGGGCTCATTGTCAACGCCATCCAGCTGTGCACGCTGGTCAT
CTGGCCCATCAACAAGCAGCTGTTCCGAAAGATAAACGCCAGACTCTGCTACTGCGTCTCCAGC
CAGTTGGTGATGCTTCTGGAGTGGTGGTCAGGTACGGAGTGTACCATCTACACCGACCCGAAGG
CCTCCCCCCACTACGGGAAGGAAAACGCCATCGTGGTTCTCAATCACAAGTTTGAGATTGACTT
TCTCTGTGGCTGGAGCCTGGCTGAGCGCCTAGGGATCCTGGGGAACTCCAAAGTCCTGGCCAAG
AAAGAACTGGCTTATGTCCCCATCATTGGCTGGATGTGGTACTTTGTGGAAATGATCTTCTGCA
CACGCAAGTGGGAGCAAGATCGGCAGACGGTTGCCAAGAGCCTGCTGCACCTCCGGGACTACCC
AGAGAAGTATCTGTTTCTGATCCACTGTGAGGGCACACGGTTCACAGAGAAGAAACACCAAATC
AGCATGCAGGTGGCCCAAGCCAAGGGGCTGCCCAGCCTCAAGCATCACCTGCTGCCACGCACCA
AGGGCTTTGCTATCACTGTGAAGTGCTTGCGAGATGTTGTCCCAGCCGTATATGACTGTACACT
CAATTTCAGAAACAATGAAAACCCAACACTGCTGGGAGTCTTAAATGGAAAGAAATATCACGCT
GACTGCTACGTTAGGAGGATCCCCATGGAAGACATCCCTGAGGATGAGGACAAGTGCTCAGCCT
GGCTACACAAGCTCTACCAGGAGAAGGATGCCTTTCAGGAGGAATACTACAGGACAGGGGTCTT
CCCAGAGACTCCCTGGGTTCCCCCACGGCGGCCCTGGTCTCTGGTCAACTGGTTGTTCTGGGCG
TCGTTGCTGCTCTATCCTTTCTTCCAGTTCCTTGTTAGCATGGTCAGCAGCGGTTCCTCGGTGA
CGCTGGCCAGCTTGGTCCTCATCTTCTGCATGGCCTCCATGGGAGTTCGATGGATGATTGGTGT
GACAGAAATCGACAAGGGCTCTGCCTATGGCAACATCGACAACAAACGGAAACAAACTGACTGA
TGTGGAAAATGTCACCTCCAAAGGGAACCGTGGGGGACAGTTGGCCTCTGCTTAGCCTTTATAG
CAGGGTTCAGTGATGGAGACTGGAGGGCCTTGCTGGGGCAAACAGAAACCACAGCCCCTCCAGT
CATGGAGTTTGCCTTGGCGCTGGATGGGAAAGGAAGATGGTTTTATACCTTTCCCCTCCCCCAT
CCCCCGTGTGAATTACTGGGTTTGGTTAACGTTTCTTTTCAGTTGCAACACGTGTTTGTGTGTA
TGTGTGTGTGAGAGAGATGGGGGTGAGGAGAATGAGTGTGTGGTTGCGTGTGCACTTGTGACCC
TGTGACAGTAGGGTCTGTGAGGCTGCAGGGAAGGGCAGGGCTGGGGTGGAAGAGAAGGTGTGTG
TCCCTGTCATCCCGTGGTGCTGCGTCTTCTCTAACCATCGATCGCTGGAGACGGAGTGAAGTGT
TTGGGTAAGACAACTAAATTATGCCTCCAAATAAGAAAAAGAATTAAAGTGTTTGTCTGGGTCA
AAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006227856 ⟹ XP_006227918

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	51,075,081 - 51,154,717 (-)	NCBI
mRatBN7.2	1	48,525,131 - 48,605,505 (-)	NCBI
Rnor_6.0	1	48,716,094 - 48,798,471 (-)	NCBI
Rnor_5.0	1	50,929,133 - 51,035,499 (+)	NCBI

Sequence:

show sequence

CATGCGCACACAGCGCCCACAGATGCCAGAACACAGCATCAGAACCCCTAGCATGGGAGTTACA
GATGCTTGTGAGTCACAGTACGTGTGCTTGGAATTGAACCAGGTCTTCTGTGGGAACAGAAAGT
GCTATCTCACCAGCCCGGTCATTTCAGTTTCTGAGGTGCATCTTGTCCCATCCCAAATTCCTAC
CAGGAAGCACAGATGAGATTGAAAGTGTGGGGGATGGGTGCCAGGCCTTGCTTCGAGTCACACT
GAGGAGCTGCTAGCATCTAAAGAAACACGAAGGAGGAAGACAGTCCATCCACAGCCCACAGCTT
CCTCAGAAACACCATACCTCTGTCTCTCAGGCGCTCCCTCCTTGTTTGCGTATGTGCTTGGGAG
TGAGAGACCCTCCTTCTTGTAGGCCTCGTGTATCTCAGCTGCGTTATTACCTTCAGCCCTCACA
AGTGCCGGGGTCAGACGGTTCCATTCTGATTTTACAGAGAGGAGTGACTGAGCCTGGGCTTCTG
TCTGAGCTTCCAGGCTCAGATATTGGTCTATGGTGCCCTGAATGCTCACCATTGTGCCACAGTG
TCCGAAGCACACTGTGGGACTTGAGTTCTCAATGGCCCCAGCTCCTTCCCATTTCAGCATTTTC
CATGTTACTGATTGCTGGATGACCCCCCCTCCTTCTTTCTTTTCAGTGAGCAGCATGCTTTCCT
TCCCTCATAGACAGGCAGACCTCTCCCCTTCACCCTACACCCTTGCCACTGGCCACATCAACCT
CTAAGAGCTGGGACAGGGTTCAACCAAGTTCCATTTCCACGAGACAGGTCTCATTCTCTTGGCA
GACAAAACCAGCAAAATACAGGTCTAAGCCATGACTCTTCCACCCGTCAAGCCACCCTTAATGG
ATGGATGGCTGTGATGAACCATAGAGGCAGAGACGGTTTCCTGAGCCCCGGATCTTTCTCCCTT
CTGGAACTATTCCGCCATACGTACTTGTCTCTTGAGAATCCCCGCATCATGGACCTCATCGGGC
TGCTGAAGTCCCAGTTTCTGTGTCACCTGGTCTTCTGCTACGTGTTCATCGCCTCCGGGCTCAT
TGTCAACGCCATCCAGCTGTGCACGCTGGTCATCTGGCCCATCAACAAGCAGCTGTTCCGAAAG
ATAAACGCCAGACTCTGCTACTGCGTCTCCAGCCAGTTGGTGATGCTTCTGGAGTGGTGGTCAG
GTACGGAGTGTACCATCTACACCGACCCGAAGGCCTCCCCCCACTACGGGAAGGAAAACGCCAT
CGTGGTTCTCAATCACAAGTTTGAGATTGACTTTCTCTGTGGCTGGAGCCTGGCTGAGCGCCTA
GGGATCCTGGGGAACTCCAAAGTCCTGGCCAAGAAAGAACTGGCTTATGTCCCCATCATTGGCT
GGATGTGGTACTTTGTGGAAATGATCTTCTGCACACGCAAGTGGGAGCAAGATCGGCAGACGGT
TGCCAAGAGCCTGCTGCACCTCCGGGACTACCCAGAGAAGTATCTGTTTCTGATCCACTGTGAG
GGCACACGGTTCACAGAGAAGAAACACCAAATCAGCATGCAGGTAGCCCAAGCCAAGGGGCTGC
CCAGCCTCAAGCATCACCTGCTGCCACGCACCAAGGGCTTTGCTATCACTGTGAAGTGCTTGCG
AGATGTTGTCCCAGCCGTATATGACTGTACACTCAATTTCAGAAACAATGAAAACCCAACACTG
CTGGGAGTCTTAAATGGAAAGAAATATCACGCTGACTGCTACGTTAGGAGGATCCCCATGGAAG
ACATCCCTGAGGATGAGGACAAGTGCTCAGCCTGGCTACACAAGCTCTACCAGGAGAAGGATGC
CTTTCAGGAGGAATACTACAGGACAGGGGTCTTCCCAGAGACTCCCTGGGTTCCCCCACGGCGG
CCCTGGTCTCTGGTCAACTGGTTGTTCTGGGCGTCGCTGCTGCTCTATCCTTTCTTCCAGTTCC
TTGTTAGCATGGTCAGCAGCGGTTCCTCGGTGACGCTGGCCAGCTTGGTCCTCATCTTCTGCAT
GGCCTCCATGGGAGTTCGATGGATGATTGGTGTGACAGAAATCGACAAGGGCTCTGCCTATGGC
AACATCGACAACAAACGGAAACAAACTGACTGATGTGGAAAATGTCACCTCCAAAGGGAACCGT
GGGGGACAGTTGGCCTCTGCTTAGCCTTTATAGCAGGGTTCAGTGATGGAGACTGGAGGGCCTT
GCTGGGACAAACAGAAACCACAGCCCCTCCAGTCATGGAGTTTGCCTTGGCGCTGGATGGGAAA
GGAAGATGGTTTTATACCTTTCCCCTCCCCCATCCCCGTGTGAATTACTGGGTTTGGTTACGTT
TCTTTTCAGTTGCACACGTGTTTGTGTGTATGTGTGTGTGAGAGAGATGGGGGTGAGGAGAATG
AGTGTGTGGTTGCGTGTGCACTTGTGACCCTGTGACAGTAGGGTCTGTGAGGCTGCAGGGAAGG
GCAGGGCTGGGGTGGAAGAGAAGGTGTGTGTCCCTGTCATCCCGTGGTGCTGCGTCTTCTCTAA
CCATCGATCGCTGGAGACGGAGTGAAGTGTTTGGGTAAGACAACTAAATTATGCCTCCAAATAA
GAAAAAGAATTAAAGTGTTTGTCTGGGTCATCTGTGGCAAGTATTTACACAAATCTGCTACCCC
CCACCCCCACTCTTCCCTGGCTTTGGGTATTGCATATGGCAGCTTCTCACCAGCTTTGCTCCCA
GTGGGGGCTGCTGAGAGCTTGAGTGAGGTGCACACACTGACAGGTCACTTGAGGGTGCGCGCGC
GCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTAGTCACTTG
TCAATGTCAGGAAGGGTTTGTTTTGGTTCACAGTTCAAGGGTACAGTCCATCATGGTGGGGGGT
CATGGCAGTAGGAACGGGAAGAATCCTGTCGGTCAGAGAGAAGAGACGGATGCTGGTGCTTACC
TCTCTTTCGCTCAGTTCGGAGCCCCAGCACACAGAATAGTGAAGCTATGATAGGTCCGCCCCTA
TCCATCACTCTATTAGTTTAATCTAGAATCCCTTGGATTACCTGTACAGGCACAACCGGAGACT
CGCCTCCTAGGTGACTCTGCATCCTGTCAACTTGACAGGCAGCATGAACCAGCACAGGATGCCA
ATGCAGAGACGTGGGCGTCGGAGCCCCTCTGAGCAAGAGCCAGGACGAGGGTGCTGGGAGGCCA
GCTGAGAGCTTGCTTCCAACGAGGCAGAGAGGACAGTCTGATGAGGCGGCATCCACTAGTCTTG
AAGGTCTTAAGCTTTGAAACGGAATGTTATGACAACCTCAGAAACTGTCACAGGAGTGGGGAAG
CTCTTAAAGCAAGGTCAGGAGCATTTTACAAAATGGAACCACGCCCCTTTTCAGCTGTCCTGTG
GTACCCACTAAGGAGCCGGGTGCTACTTAAAAACACAAATGAGCCCATCTGGGGGGCTCTGCTC
TCCCCCACACTGAGCTCCTGTTAGAACATGAAAGGGTGGCTGCTCTCCTCTGCAGTCTTTGGAG
AATGGCCCATGGCAGACATTTGCAGACTGAGGGCAGTCAGCAGAGGCTGGATACAAACAAAACA
AGAAGAAAAAGGTTAGCGTTTTAAGACGGTACCTGAAAGGTATTCGTTATAAGACGGAGAAGCT
GGCAGTGCTTGGACTGATGCCCTCCTCCCTGTGTGCAGCTATGCACCACCTGGTACAACCACAC
ACCCCCACTAGAAAAGCTGCCCATGGGGCCCACAAAGGCACATCCTGTCCAGTGTCACTGCAGA
CTTAAATGTCTGTGCACCGAGTCATCAAATGGCAGCCACACAGTCAAGTGTGACTCTGACCTTG
AAGAGCCAAGGGGTGACCCGGGTTCTAGAGCCCTCTGTTTAAGGGACAACGTATTATAAACACA
AATAAATCTGGGCTTGCAGAAATCAGAACACCACATTCTGGGTTTTTTGTGTACCAGAGTAGAC
AGTGCAGGGGAGGCTGAGTTCCCACAAGGTGCTAAGCCGGGCACATCTGCCCTGCCATGCGGGC
CAGAAATCACACAGAGAAAACTGGACGCTACTCTTCAGGGGACCCTGTGTTGTAGAGGCCCTGT
AGGCCTCCCTTGGATCCTAAGGCCACTTTATCTGGGACCTGAGCTTGCCTTCACTGAATTCTGT
GGCTTGGCCAAGTAAATATTCAATCCAGGCCATCCAGCCTCCTGACCTCCAGGGGGCCATCTGC
TCAATTGTAAAATAGGAATGACACTCACCCACCCCCTGGGTTGCTGTGAGAGTGGGAAGAGGCT
AACCTTGGGAAGGTAGGATCACAGAACAAATCGGGTGGAGGAATGGCAGGCGGCTTCTAAGCTG
TGACTTCTCAAAGTACTTGGCAAGAACCAGACCGTGGTACAAGGCTTAGTCTCTTTGGTTTTGA
CCTGTCTTTGGTGGCAGGGCAGAGACATTTTAGGTAAACTGAATGGGGAGTGGTATCTGAATGG
CCTTAGAACACAAAAGGGAACAGGAGTTTGAGGGGAACCCCAGCAGCGTGCCTCAGCTGGCTGG
CCTGACCTGACTCTCTCCCTAGCCCGTTTCCTTAATTCAGAGTCAGGGATTCACAGGATCCTTT
GAAAAGATCTTGGCATGATGGCTACAGAACGGAGGCTCACTGAAAACCTCCACTAGGTTTTCAG
AAAATCAATTGTTTTTCTATGTGCTAACAGAGACCTGGAATACATCTTAACGCCTTAATTTCTA
AAGTGTGCAAAACCTTGGAAAAGTAACAGGATGTTCAAAACGTTAGAACATCTGCATCTTTCTT
TATGCTCAGTGGGTGGCGGGGGGTCGGTCTGAAAGATTGATCACATTGTGGTAACTGGTTGTAG
GCAGCTAAGAGTGGTGTGGCCAGTGCCAGGAAGAGCAGGACAGAGTGGGCTCAACACTGGTTTC
TGAGCTTGTCCATACAGATGACAGCAATGGACAGAGCTGGCCACTGGGTTCTTCGGTCCAGGTG
CCCCAAAGCACTGTGTATGTTACGGACACCTGTCAGTATGAAAGTTAAGCGAAAAATGGTGGCC
CCTGGGCTCAGCAAGCCCCCGGCAGGACCAGGACAGTCTGGAGGAGTGCAGAGTGCTGTCGGGA
CGTGTATGGGAGTTGGAGTTTGAAAGGGGAAAGATGGACGGCATACAGCTAAGGCTGCCTTATG
GCCACCTGTTCTCCCGGGGCACTGCGGAAAGCACTCCCCAAGTTTAATGTCGTAAGTGGTTTGA
AGCCTGGAGAGTGAAGTAGGGCAGATGCAAACATGGCGCTTGTCTCCCTCTGACACTTCAGGGG
GCTGAGCCGTGTCACAGGGACTGCCAGTCAAGGCCTCAGGACCAACTCACGTGGCAGTTTTAGT
AACCGTCTGGATGCAGAGGTTCCAGTGTCTACACCGCCGTGAGCCTGCTGCCCCTTTCCAGGTC
TGTATGATTTGCTGTCCCTGCAGACCCGCTGTGTTCAAAAGGGATGGTCAGCAGTGACAACCAC
GGTCTCTCGGACTTGTCTTCGCCTCTTCCAAGCCTCGGACAGTTGCTTACATGTTTGTTGTTGG
GATTCTTCCTCACATACATAAACATCGAGTGTTTGAAGATATCAGAAATTGTTTCCCCATAATT
GGGCAACTTTCTGAAAATGTTTTCCCAGACTTCCTTGGAGACTGTTTCTTCTTTTATTAGAATG
AACGAAGCTGACCCTCGGAGTGCAAGCTGGGGCAGAAGGGTTTAGCTAGGTCCCTCTGTCCACA
GACAAGTCAGGAAGGCAAGGGGCTCCATCAGCACAGAACCCCAGGCCTGCCTGCTGACCAACAC
CTCATATGCACTGCATAACCACGCCAGCCCCACCTAATCGCATCCCCAGAGCCGTGCGTACATG
GACTCTGGCTCAAGTGCTTCTTGACTTAAAATTTCACCGAAAGCCGAACCGTGCTTTGATCTAC
CCTGCACCCGACATGACAAGAGGAGCCAAAGGCCTGAGGGAGTGACTGGATTATTGCTGGGCCC
CAGACACCCAACATTACTCAAGGCACCGGATACCAACCTGCAAAAGACCTGTTTCGTGATATCT
GACTGTTCAGAACTATTGTTTTGGTCAAGAACACAGCATATAAAATGC

hide sequence

RefSeq Acc Id:

XM_006227857 ⟹ XP_006227919

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	51,075,081 - 51,181,548 (-)	NCBI
mRatBN7.2	1	48,525,131 - 48,633,798 (-)	NCBI
Rnor_6.0	1	48,716,094 - 48,826,292 (-)	NCBI
Rnor_5.0	1	50,929,133 - 51,035,499 (+)	NCBI

Sequence:

show sequence

GAAAGCTGTTTGCCGCGTTTCTGCAGCCCTGAGAAATTCACCAGTACTGCTTACGCATGGAGAG
AGTACAGTGACCACCGGGGCATTCTTTTTTGTAAATACGTAAACATCTGCGGACGGTGTCTTGA
ACAACGTGTATTTGAAGGGCACTTTAAGGCACCCAGCGATTGAAGCCACCTTCCCAGGAATGTC
ACAGACCTGGCCTTGGCGTACTTCCAACAATCACCCTCCTTAAAGTTTCGTGACTCTATTCGGT
TAAGAAGGTCTGCTCAGACCCTAGCTAATTTAACCGGAGTGTGAATGCCATGTGCACGTGCGTG
TTGCCTGCTTGTGCGCACTCGCAGCGGTAGCCAGCTCTGGCAACCGGCTGGCACCTAGCTTTGG
AGGGAGAGCATCTATACACAGGAGCTCCAGGCATCCCAGGTCTGCCGGTCTCAGTCTCGGGAGC
GCTGGGCTTCCGGGCTGGTGGAGTGGTGGCCAGGAGAGACGGTTTCCTGAGCCCCGGATCTTTC
TCCCTTCTGGAACTATTCCGCCATACGTACTTGTCTCTTGAGAATCCCCGCATCATGGACCTCA
TCGGGCTGCTGAAGTCCCAGTTTCTGTGTCACCTGGTCTTCTGCTACGTGTTCATCGCCTCCGG
GCTCATTGTCAACGCCATCCAGCTGTGCACGCTGGTCATCTGGCCCATCAACAAGCAGCTGTTC
CGAAAGATAAACGCCAGACTCTGCTACTGCGTCTCCAGCCAGTTGGTGATGCTTCTGGAGTGGT
GGTCAGGTACGGAGTGTACCATCTACACCGACCCGAAGGCCTCCCCCCACTACGGGAAGGAAAA
CGCCATCGTGGTTCTCAATCACAAGTTTGAGATTGACTTTCTCTGTGGCTGGAGCCTGGCTGAG
CGCCTAGGGATCCTGGGGAACTCCAAAGTCCTGGCCAAGAAAGAACTGGCTTATGTCCCCATCA
TTGGCTGGATGTGGTACTTTGTGGAAATGATCTTCTGCACACGCAAGTGGGAGCAAGATCGGCA
GACGGTTGCCAAGAGCCTGCTGCACCTCCGGGACTACCCAGAGAAGTATCTGTTTCTGATCCAC
TGTGAGGGCACACGGTTCACAGAGAAGAAACACCAAATCAGCATGCAGGTAGCCCAAGCCAAGG
GGCTGCCCAGCCTCAAGCATCACCTGCTGCCACGCACCAAGGGCTTTGCTATCACTGTGAAGTG
CTTGCGAGATGTTGTCCCAGCCGTATATGACTGTACACTCAATTTCAGAAACAATGAAAACCCA
ACACTGCTGGGAGTCTTAAATGGAAAGAAATATCACGCTGACTGCTACGTTAGGAGGATCCCCA
TGGAAGACATCCCTGAGGATGAGGACAAGTGCTCAGCCTGGCTACACAAGCTCTACCAGGAGAA
GGATGCCTTTCAGGAGGAATACTACAGGACAGGGGTCTTCCCAGAGACTCCCTGGGTTCCCCCA
CGGCGGCCCTGGTCTCTGGTCAACTGGTTGTTCTGGGCGTCGCTGCTGCTCTATCCTTTCTTCC
AGTTCCTTGTTAGCATGGTCAGCAGCGGTTCCTCGGTGACGCTGGCCAGCTTGGTCCTCATCTT
CTGCATGGCCTCCATGGGAGTTCGATGGATGATTGGTGTGACAGAAATCGACAAGGGCTCTGCC
TATGGCAACATCGACAACAAACGGAAACAAACTGACTGATGTGGAAAATGTCACCTCCAAAGGG
AACCGTGGGGGACAGTTGGCCTCTGCTTAGCCTTTATAGCAGGGTTCAGTGATGGAGACTGGAG
GGCCTTGCTGGGACAAACAGAAACCACAGCCCCTCCAGTCATGGAGTTTGCCTTGGCGCTGGAT
GGGAAAGGAAGATGGTTTTATACCTTTCCCCTCCCCCATCCCCGTGTGAATTACTGGGTTTGGT
TACGTTTCTTTTCAGTTGCACACGTGTTTGTGTGTATGTGTGTGTGAGAGAGATGGGGGTGAGG
AGAATGAGTGTGTGGTTGCGTGTGCACTTGTGACCCTGTGACAGTAGGGTCTGTGAGGCTGCAG
GGAAGGGCAGGGCTGGGGTGGAAGAGAAGGTGTGTGTCCCTGTCATCCCGTGGTGCTGCGTCTT
CTCTAACCATCGATCGCTGGAGACGGAGTGAAGTGTTTGGGTAAGACAACTAAATTATGCCTCC
AAATAAGAAAAAGAATTAAAGTGTTTGTCTGGGTCATCTGTGGCAAGTATTTACACAAATCTGC
TACCCCCCACCCCCACTCTTCCCTGGCTTTGGGTATTGCATATGGCAGCTTCTCACCAGCTTTG
CTCCCAGTGGGGGCTGCTGAGAGCTTGAGTGAGGTGCACACACTGACAGGTCACTTGAGGGTGC
GCGCGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTAGT
CACTTGTCAATGTCAGGAAGGGTTTGTTTTGGTTCACAGTTCAAGGGTACAGTCCATCATGGTG
GGGGGTCATGGCAGTAGGAACGGGAAGAATCCTGTCGGTCAGAGAGAAGAGACGGATGCTGGTG
CTTACCTCTCTTTCGCTCAGTTCGGAGCCCCAGCACACAGAATAGTGAAGCTATGATAGGTCCG
CCCCTATCCATCACTCTATTAGTTTAATCTAGAATCCCTTGGATTACCTGTACAGGCACAACCG
GAGACTCGCCTCCTAGGTGACTCTGCATCCTGTCAACTTGACAGGCAGCATGAACCAGCACAGG
ATGCCAATGCAGAGACGTGGGCGTCGGAGCCCCTCTGAGCAAGAGCCAGGACGAGGGTGCTGGG
AGGCCAGCTGAGAGCTTGCTTCCAACGAGGCAGAGAGGACAGTCTGATGAGGCGGCATCCACTA
GTCTTGAAGGTCTTAAGCTTTGAAACGGAATGTTATGACAACCTCAGAAACTGTCACAGGAGTG
GGGAAGCTCTTAAAGCAAGGTCAGGAGCATTTTACAAAATGGAACCACGCCCCTTTTCAGCTGT
CCTGTGGTACCCACTAAGGAGCCGGGTGCTACTTAAAAACACAAATGAGCCCATCTGGGGGGCT
CTGCTCTCCCCCACACTGAGCTCCTGTTAGAACATGAAAGGGTGGCTGCTCTCCTCTGCAGTCT
TTGGAGAATGGCCCATGGCAGACATTTGCAGACTGAGGGCAGTCAGCAGAGGCTGGATACAAAC
AAAACAAGAAGAAAAAGGTTAGCGTTTTAAGACGGTACCTGAAAGGTATTCGTTATAAGACGGA
GAAGCTGGCAGTGCTTGGACTGATGCCCTCCTCCCTGTGTGCAGCTATGCACCACCTGGTACAA
CCACACACCCCCACTAGAAAAGCTGCCCATGGGGCCCACAAAGGCACATCCTGTCCAGTGTCAC
TGCAGACTTAAATGTCTGTGCACCGAGTCATCAAATGGCAGCCACACAGTCAAGTGTGACTCTG
ACCTTGAAGAGCCAAGGGGTGACCCGGGTTCTAGAGCCCTCTGTTTAAGGGACAACGTATTATA
AACACAAATAAATCTGGGCTTGCAGAAATCAGAACACCACATTCTGGGTTTTTTGTGTACCAGA
GTAGACAGTGCAGGGGAGGCTGAGTTCCCACAAGGTGCTAAGCCGGGCACATCTGCCCTGCCAT
GCGGGCCAGAAATCACACAGAGAAAACTGGACGCTACTCTTCAGGGGACCCTGTGTTGTAGAGG
CCCTGTAGGCCTCCCTTGGATCCTAAGGCCACTTTATCTGGGACCTGAGCTTGCCTTCACTGAA
TTCTGTGGCTTGGCCAAGTAAATATTCAATCCAGGCCATCCAGCCTCCTGACCTCCAGGGGGCC
ATCTGCTCAATTGTAAAATAGGAATGACACTCACCCACCCCCTGGGTTGCTGTGAGAGTGGGAA
GAGGCTAACCTTGGGAAGGTAGGATCACAGAACAAATCGGGTGGAGGAATGGCAGGCGGCTTCT
AAGCTGTGACTTCTCAAAGTACTTGGCAAGAACCAGACCGTGGTACAAGGCTTAGTCTCTTTGG
TTTTGACCTGTCTTTGGTGGCAGGGCAGAGACATTTTAGGTAAACTGAATGGGGAGTGGTATCT
GAATGGCCTTAGAACACAAAAGGGAACAGGAGTTTGAGGGGAACCCCAGCAGCGTGCCTCAGCT
GGCTGGCCTGACCTGACTCTCTCCCTAGCCCGTTTCCTTAATTCAGAGTCAGGGATTCACAGGA
TCCTTTGAAAAGATCTTGGCATGATGGCTACAGAACGGAGGCTCACTGAAAACCTCCACTAGGT
TTTCAGAAAATCAATTGTTTTTCTATGTGCTAACAGAGACCTGGAATACATCTTAACGCCTTAA
TTTCTAAAGTGTGCAAAACCTTGGAAAAGTAACAGGATGTTCAAAACGTTAGAACATCTGCATC
TTTCTTTATGCTCAGTGGGTGGCGGGGGGTCGGTCTGAAAGATTGATCACATTGTGGTAACTGG
TTGTAGGCAGCTAAGAGTGGTGTGGCCAGTGCCAGGAAGAGCAGGACAGAGTGGGCTCAACACT
GGTTTCTGAGCTTGTCCATACAGATGACAGCAATGGACAGAGCTGGCCACTGGGTTCTTCGGTC
CAGGTGCCCCAAAGCACTGTGTATGTTACGGACACCTGTCAGTATGAAAGTTAAGCGAAAAATG
GTGGCCCCTGGGCTCAGCAAGCCCCCGGCAGGACCAGGACAGTCTGGAGGAGTGCAGAGTGCTG
TCGGGACGTGTATGGGAGTTGGAGTTTGAAAGGGGAAAGATGGACGGCATACAGCTAAGGCTGC
CTTATGGCCACCTGTTCTCCCGGGGCACTGCGGAAAGCACTCCCCAAGTTTAATGTCGTAAGTG
GTTTGAAGCCTGGAGAGTGAAGTAGGGCAGATGCAAACATGGCGCTTGTCTCCCTCTGACACTT
CAGGGGGCTGAGCCGTGTCACAGGGACTGCCAGTCAAGGCCTCAGGACCAACTCACGTGGCAGT
TTTAGTAACCGTCTGGATGCAGAGGTTCCAGTGTCTACACCGCCGTGAGCCTGCTGCCCCTTTC
CAGGTCTGTATGATTTGCTGTCCCTGCAGACCCGCTGTGTTCAAAAGGGATGGTCAGCAGTGAC
AACCACGGTCTCTCGGACTTGTCTTCGCCTCTTCCAAGCCTCGGACAGTTGCTTACATGTTTGT
TGTTGGGATTCTTCCTCACATACATAAACATCGAGTGTTTGAAGATATCAGAAATTGTTTCCCC
ATAATTGGGCAACTTTCTGAAAATGTTTTCCCAGACTTCCTTGGAGACTGTTTCTTCTTTTATT
AGAATGAACGAAGCTGACCCTCGGAGTGCAAGCTGGGGCAGAAGGGTTTAGCTAGGTCCCTCTG
TCCACAGACAAGTCAGGAAGGCAAGGGGCTCCATCAGCACAGAACCCCAGGCCTGCCTGCTGAC
CAACACCTCATATGCACTGCATAACCACGCCAGCCCCACCTAATCGCATCCCCAGAGCCGTGCG
TACATGGACTCTGGCTCAAGTGCTTCTTGACTTAAAATTTCACCGAAAGCCGAACCGTGCTTTG
ATCTACCCTGCACCCGACATGACAAGAGGAGCCAAAGGCCTGAGGGAGTGACTGGATTATTGCT
GGGCCCCAGACACCCAACATTACTCAAGGCACCGGATACCAACCTGCAAAAGACCTGTTTCGTG
ATATCTGACTGTTCAGAACTATTGTTTTGGTCAAGAACACAGCATATAAAATGC

hide sequence

RefSeq Acc Id:

XM_063272836 ⟹ XP_063128906

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	51,075,081 - 51,148,291 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_596897	(Get FASTA)	NCBI Sequence Viewer
	XP_006227918	(Get FASTA)	NCBI Sequence Viewer
	XP_006227919	(Get FASTA)	NCBI Sequence Viewer
	XP_063128906	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH86992	(Get FASTA)	NCBI Sequence Viewer
	BAB62290	(Get FASTA)	NCBI Sequence Viewer
	EDL83076	(Get FASTA)	NCBI Sequence Viewer
	EDL83077	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000024213
	ENSRNOP00000024213.2
	ENSRNOP00000069883
GenBank Protein	Q924S1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_596897 ⟸ NM_133406

- UniProtKB:

Q924S1 (UniProtKB/Swiss-Prot), A6KJY8 (UniProtKB/TrEMBL), A0A8I6ALQ9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDLIGLLKSQFLCHLVFCYVFIASGLIVNAIQLCTLVIWPINKQLFRKINARLCYCVSSQLVML
LEWWSGTECTIYTDPKASPHYGKENAIVVLNHKFEIDFLCGWSLAERLGILGNSKVLAKKELAY
VPIIGWMWYFVEMIFCTRKWEQDRQTVAKSLLHLRDYPEKYLFLIHCEGTRFTEKKHQISMQVA
QAKGLPSLKHHLLPRTKGFAITVKCLRDVVPAVYDCTLNFRNNENPTLLGVLNGKKYHADCYVR
RIPMEDIPEDEDKCSAWLHKLYQEKDAFQEEYYRTGVFPETPWVPPRRPWSLVNWLFWASLLLY
PFFQFLVSMVSSGSSVTLASLVLIFCMASMGVRWMIGVTEIDKGSAYGNIDNKRKQTD

hide sequence

RefSeq Acc Id:	XP_006227919 ⟸ XM_006227857
- Peptide Label:	isoform X2
- UniProtKB:	Q924S1 (UniProtKB/Swiss-Prot), A6KJY8 (UniProtKB/TrEMBL), A0A8I6ALQ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDLIGLLKSQFLCHLVFCYVFIASGLIVNAIQLCTLVIWPINKQLFRKINARLCYCVSSQLVML LEWWSGTECTIYTDPKASPHYGKENAIVVLNHKFEIDFLCGWSLAERLGILGNSKVLAKKELAY VPIIGWMWYFVEMIFCTRKWEQDRQTVAKSLLHLRDYPEKYLFLIHCEGTRFTEKKHQISMQVA QAKGLPSLKHHLLPRTKGFAITVKCLRDVVPAVYDCTLNFRNNENPTLLGVLNGKKYHADCYVR RIPMEDIPEDEDKCSAWLHKLYQEKDAFQEEYYRTGVFPETPWVPPRRPWSLVNWLFWASLLLY PFFQFLVSMVSSGSSVTLASLVLIFCMASMGVRWMIGVTEIDKGSAYGNIDNKRKQTD hide sequence

RefSeq Acc Id:	XP_006227918 ⟸ XM_006227856
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JWH4 (UniProtKB/TrEMBL), A0A8I6ALQ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAVMNHRGRDGFLSPGSFSLLELFRHTYLSLENPRIMDLIGLLKSQFLCHLVFCYVFIASGLIV NAIQLCTLVIWPINKQLFRKINARLCYCVSSQLVMLLEWWSGTECTIYTDPKASPHYGKENAIV VLNHKFEIDFLCGWSLAERLGILGNSKVLAKKELAYVPIIGWMWYFVEMIFCTRKWEQDRQTVA KSLLHLRDYPEKYLFLIHCEGTRFTEKKHQISMQVAQAKGLPSLKHHLLPRTKGFAITVKCLRD VVPAVYDCTLNFRNNENPTLLGVLNGKKYHADCYVRRIPMEDIPEDEDKCSAWLHKLYQEKDAF QEEYYRTGVFPETPWVPPRRPWSLVNWLFWASLLLYPFFQFLVSMVSSGSSVTLASLVLIFCMA SMGVRWMIGVTEIDKGSAYGNIDNKRKQTD hide sequence

Ensembl Acc Id:

ENSRNOP00000069883 ⟸ ENSRNOT00000082958

Ensembl Acc Id:

ENSRNOP00000024213 ⟸ ENSRNOT00000024213

Ensembl Acc Id:

ENSRNOP00000094231 ⟸ ENSRNOT00000117069

RefSeq Acc Id:	XP_063128906 ⟸ XM_063272836
- Peptide Label:	isoform X3

Protein Domains

Phospholipid/glycerol acyltransferase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q924S1-F1-model_v2	AlphaFold	Q924S1	1-378	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13689623

Promoter ID:

EPDNEW_R148

Type:

initiation region

Name:

Agpat4_1

Description:

1-acylglycerol-3-phosphate O-acyltransferase 4

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	1	48,825,331 - 48,825,391	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:619916	AgrOrtholog
BioCyc Gene	G2FUF-61557	BioCyc
BioCyc Pathway	PWY-5667 [CDP-diacylglycerol biosynthesis I]	BioCyc
	PWY-7411 [phosphatidate biosynthesis (yeast)]	BioCyc
	PWY-7417 [phospholipid remodeling (phosphatidate, yeast)]	BioCyc
	PWY-7782 [plasmalogen biosynthesis]	BioCyc
	PWY-8053 [anandamide biosynthesis II]	BioCyc
	TRIGLSYN-PWY [diacylglycerol and triacylglycerol biosynthesis]	BioCyc
BioCyc Pathway Image	PWY-5667	BioCyc
	PWY-7411	BioCyc
	PWY-7417	BioCyc
	PWY-7782	BioCyc
	PWY-8053	BioCyc
	TRIGLSYN-PWY	BioCyc
Ensembl Genes	ENSRNOG00000017731	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000024213	ENTREZGENE
	ENSRNOT00000024213.5	UniProtKB/Swiss-Prot
	ENSRNOT00000082958	ENTREZGENE
IMAGE_CLONE	IMAGE:7191675	IMAGE-MGC_LOAD
InterPro	Acyltransf_C	UniProtKB/Swiss-Prot
	Plipid/glycerol_acylTrfase	UniProtKB/Swiss-Prot
KEGG Report	rno:170919	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:93227	IMAGE-MGC_LOAD
NCBI Gene	170919	ENTREZGENE
PANTHER	1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE DELTA	UniProtKB/Swiss-Prot
	1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED	UniProtKB/Swiss-Prot
Pfam	Acyltransf_C	UniProtKB/Swiss-Prot
	Acyltransferase	UniProtKB/Swiss-Prot
PhenoGen	Agpat4	PhenoGen
RatGTEx	ENSRNOG00000017731	RatGTEx
SMART	PlsC	UniProtKB/Swiss-Prot
Superfamily-SCOP	Glycerol-3-phosphate (1)-acyltransferase	UniProtKB/Swiss-Prot
UniProt	A0A0G2JWH4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6ALQ9	ENTREZGENE, UniProtKB/TrEMBL
	A6KJY8	ENTREZGENE, UniProtKB/TrEMBL
	PLCD_RAT	UniProtKB/Swiss-Prot, ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-02-13	Agpat4	1-acylglycerol-3-phosphate O-acyltransferase 4	Agpat4	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-11-17	Agpat4	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)		1-acylglycerol-3-phosphate O-acyltransferase 4	Name updated	1299863	APPROVED
2004-12-14	Agpat4	1-acylglycerol-3-phosphate O-acyltransferase 4		1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, delta)	Name updated	1299863	APPROVED
2002-08-07	Agpat4	1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, delta)			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_function	converts lysophosphatidic acid (lpa) into phosphatidic acid by incorporating acyl moiety at the 2 position	724707

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Annotations - KEGG (archival)

BioCyc Pathways

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Imported Annotations - KEGG (archival)

BioCyc Pathways