Slc7a9 (solute carrier family 7 member 9)

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Gene: Slc7a9 (solute carrier family 7 member 9) Rattus norvegicus

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Symbol:

Slc7a9

Name:

solute carrier family 7 member 9

RGD ID:

619905

Description:

Enables amino acid transmembrane transporter activity. Involved in amino acid transport. Located in plasma membrane. Human ortholog(s) of this gene implicated in cystinuria. Orthologous to human SLC7A9 (solute carrier family 7 member 9); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',4,4',5-pentachlorobiphenyl; 3-chloropropane-1,2-diol.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

B(0,+)-type amino acid transporter 1; b(0,+)AT; glycoprotein-associated amino acid transporter b0,+AT1; MGC114282; solute carrier family 7 (amino acid transporter light chain, bo,+ system), member 9; solute carrier family 7 (cationic amino acid transporter, y+ system), member 9; solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC7A9 (solute carrier family 7 member 9)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Slc7a9 (solute carrier family 7 (cationic amino acid transporter, y+ system), member 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc7a9 (solute carrier family 7 member 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC7A9 (solute carrier family 7 member 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC7A9 (solute carrier family 7 member 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc7a9 (solute carrier family 7 member 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC7A9 (solute carrier family 7 member 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC7A9 (solute carrier family 7 member 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc7a9 (solute carrier family 7 member 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	SLC7A9 (solute carrier family 7 member 9)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc7a9 (solute carrier family 7 (cationic amino acid transporter, y+ system), member 9)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc7a9 (solute carrier family 7 member 9)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	MUP1	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG9413	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	MUP3	Alliance	DIOPT (Ensembl Compara\|InParanoid\|OMA\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc7a9	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Allele / Splice:

Slc7a9^em1Mcwi Slc7a9^em2Mcwi

Genetic Models:

SS-Slc7a9^em1Mcwi SS-Slc7a9^em2Mcwi

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	97,246,253 - 97,269,546 (+)	NCBI		GRCr8
mRatBN7.2	1	88,109,517 - 88,132,653 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	88,110,644 - 88,132,641 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	93,515,663 - 93,538,236 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	101,981,616 - 102,004,191 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	95,273,953 - 95,296,526 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	91,709,034 - 91,738,492 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	91,716,383 - 91,738,494 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	92,836,837 - 92,865,759 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	87,976,440 - 87,999,102 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	88,054,550 - 88,077,212 (+)	NCBI
Celera	1	82,459,876 - 82,482,526 (+)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

cystinuria (ISO,ISS)

genetic disease (ISO)

hereditary spastic paraplegia 75 (ISO)

kidney disease (ISO)

polycystic kidney disease (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,3',4,4',5-pentachlorobiphenyl (EXP)

3-chloropropane-1,2-diol (EXP)

4,4'-sulfonyldiphenol (ISO)

aflatoxin B1 (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

Azoxymethane (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium atom (EXP)

cadmium dichloride (EXP)

chloroprene (EXP)

cisplatin (ISO)

copper atom (EXP)

copper(0) (EXP)

copper(II) sulfate (ISO)

cyclosporin A (ISO)

dextran sulfate (ISO)

dimethylarsinic acid (ISO)

furan (EXP)

genistein (EXP)

gentamycin (EXP)

GW 4064 (ISO)

hydrogen chloride (ISO)

L-cystine (ISO)

mercury dichloride (EXP)

methapyrilene (ISO)

methylarsonic acid (ISO)

mono(2-ethylhexyl) phthalate (ISO)

O-methyleugenol (ISO)

paracetamol (EXP)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

Ptaquiloside (ISO)

quercetin (ISO)

quercitrin (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

tetrachloromethane (EXP)

titanium dioxide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

valproic acid (ISO)

zidovudine (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

amino acid transmembrane transport (IBA)

amino acid transport (IDA)

basic amino acid transmembrane transport (IEA)

L-cystine transport (IBA,ISO,ISS)

neutral amino acid transport (ISO,ISS)

Cellular Component

apical plasma membrane (ISO,ISS)

brush border membrane (ISO,ISS)

plasma membrane (IDA)

Molecular Function

amino acid transmembrane transporter activity (IDA)

antiporter activity (ISO)

broad specificity neutral L-amino acid:basic L-amino acid antiporter activity (ISO,ISS)

L-cystine transmembrane transporter activity (IBA,ISO,ISS)

neutral L-amino acid transmembrane transporter activity (IBA,ISO,ISS)

peptide antigen binding (ISS)

protein binding (ISO)

protein heterodimerization activity (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

amiloride pharmacodynamics pathway (ISO)

bendroflumethiazide pharmacodynamics pathway (ISO)

bumetanide pharmacodynamics pathway (ISO)

chlorothiazide pharmacodynamics pathway (ISO)

chlorthalidone pharmacodynamics pathway (ISO)

cystinuria pathway (ISO)

eplerenone pharmacodynamics pathway (ISO)

etacrynic acid pharmacodynamics pathway (ISO)

furosemide pharmacodynamics pathway (ISO)

Hartnup disease pathway (ISO)

hydrochlorothiazide pharmacodynamics pathway (ISO)

hydroflumethiazide pharmacodynamics pathway (ISO)

iminoglycinuria pathway (ISO)

lysinuric protein intolerance pathway (ISO)

metolazone pharmacodynamics pathway (ISO)

spironolactone pharmacodynamics pathway (ISO)

torasemide pharmacodynamics pathway (ISO)

triamterene pharmacodynamics pathway (ISO)

trichlormethiazide pharmacodynamics pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Identification of an amino acid transporter associated with the cystinuria-related type II membrane glycoprotein.	Chairoungdua A, etal., J Biol Chem 1999 Oct 8;274(41):28845-8.
2.	Non-type I cystinuria caused by mutations in SLC7A9, encoding a subunit (bo,+AT) of rBAT. International Cystinuria Consortium.	Feliubadalo L, etal., Nat Genet 1999 Sep;23(1):52-7.
3.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
4.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
5.	Co-localization and interaction of b0,+-type amino acid transporter 1 (BAT1) with caveolin-1 in rat kidney.	Kwak JO, etal., J Nephrol. 2005 Nov-Dec;18(6):681-9.
6.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
7.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
8.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
9.	SMPDB Annotation Import Pipeline	Pipeline to import SMPDB annotations from SMPDB into RGD
10.	GOA pipeline	RGD automated data pipeline
11.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
12.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
13.	Comprehensive gene review and curation	RGD comprehensive gene curation

Additional References at PubMed

PMID:12167606	PMID:12477932	PMID:16609684

Genomics

Comparative Map Data

Slc7a9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	97,246,253 - 97,269,546 (+)	NCBI		GRCr8
mRatBN7.2	1	88,109,517 - 88,132,653 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	88,110,644 - 88,132,641 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	93,515,663 - 93,538,236 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	101,981,616 - 102,004,191 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	95,273,953 - 95,296,526 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	91,709,034 - 91,738,492 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	91,716,383 - 91,738,494 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	92,836,837 - 92,865,759 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	87,976,440 - 87,999,102 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	88,054,550 - 88,077,212 (+)	NCBI
Celera	1	82,459,876 - 82,482,526 (+)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

SLC7A9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	32,830,511 - 32,869,767 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	32,830,509 - 32,869,767 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	33,321,417 - 33,360,673 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	38,013,262 - 38,052,512 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	38,013,261 - 38,052,512	NCBI
Celera	19	30,015,026 - 30,054,305 (-)	NCBI		Celera
Cytogenetic Map	19	q13.11	NCBI
HuRef	19	29,823,977 - 29,863,313 (-)	NCBI		HuRef
CHM1_1	19	33,322,523 - 33,361,817 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	35,349,240 - 35,388,495 (-)	NCBI		T2T-CHM13v2.0

Slc7a9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	35,148,152 - 35,165,459 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	35,148,221 - 35,165,461 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	35,448,727 - 35,466,034 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	35,448,796 - 35,466,036 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	36,234,198 - 36,251,018 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	35,157,939 - 35,174,759 (+)	NCBI		MGSCv36	mm8
Celera	7	30,576,815 - 30,593,617 (+)	NCBI		Celera
Cytogenetic Map	7	B2	NCBI
cM Map	7	21.37	NCBI

Slc7a9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955468	5,112,161 - 5,200,266 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955468	5,112,057 - 5,201,272 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC7A9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	38,803,634 - 38,841,120 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	40,802,790 - 40,840,197 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	29,753,265 - 29,793,871 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	38,499,106 - 38,538,750 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	38,499,106 - 38,538,750 (-)	Ensembl	panpan1.1		panPan2

SLC7A9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	119,205,833 - 119,229,054 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	119,205,833 - 119,229,054 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	118,605,982 - 118,629,205 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	119,806,922 - 119,830,085 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	119,806,922 - 119,830,085 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	119,370,036 - 119,393,192 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	118,990,490 - 119,013,672 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	120,050,385 - 120,073,608 (+)	NCBI		UU_Cfam_GSD_1.0

Slc7a9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	8,701,341 - 8,730,010 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936570	2,917,709 - 2,944,158 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936570	2,917,389 - 2,944,452 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC7A9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	42,669,093 - 42,714,267 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	42,664,795 - 42,706,113 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	38,108,038 - 38,212,965 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC7A9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	27,877,089 - 27,919,268 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	27,876,364 - 27,908,098 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	5,462,017 - 5,493,104 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc7a9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624794	7,761,511 - 7,792,473 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Slc7a9
129 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	20
Count of miRNA genes:	19
Interacting mature miRNAs:	20
Transcripts:	ENSRNOT00000016919
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2313059	Bss55	Bone structure and strength QTL 55	3.2	0.0001	tibia size trait (VT:0100001)	tibia midshaft cross-sectional area (CMO:0001717)	1	43284731	118944897	Rat
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	5925874	115540829	Rat
1578649	Bmd8	Bone mineral density QTL 8	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	49393172	94393172	Rat
1582234	Gluco18	Glucose level QTL 18	3.4	0.0003	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	78479925	123479925	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	30882023	123479925	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	49393289	199050459	Rat
1578780	Cm52	Cardiac mass QTL 52	3.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	1	81591954	219808434	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	49393172	159356837	Rat
2300324	Fetw1	Fetal weight QTL 1	12.1	0.005	fetal growth trait (VT:0004201)	fetal body weight (CMO:0002080)	1	85424647	100358001	Rat
2302059	Pia36	Pristane induced arthritis QTL 36	3.8	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	1	43333002	88333002	Rat
1300121	Hrtrt1	Heart rate QTL 1	3.7		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	65789093	115540829	Rat
7421628	Bp361	Blood pressure QTL 361		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	66023617	118608521	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	22340647	102268831	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	32356093	162846471	Rat
631512	Scl6	Serum cholesterol level QTL 6	9.6		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	1	72197680	90508767	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	57336763	151090257	Rat
2313072	Bss53	Bone structure and strength QTL 53	4.3	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	43284731	118944897	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	32737458	199368955	Rat
2313078	Bss54	Bone structure and strength QTL 54	3.5	0.0001	tibia area (VT:1000281)	tibia midshaft cross-sectional area (CMO:0001717)	1	43284731	118944897	Rat
1549903	Bp267	Blood pressure QTL 267			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	77876254	106047988	Rat
2313083	Bmd74	Bone mineral density QTL 74	4	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	82174743	118944897	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	48963584	144267916	Rat
4889494	Scort2	Serum corticosterone level QTL 2	4.2		blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	1	80592172	125592172	Rat
61342	Bp27	Blood pressure QTL 27	3.4	0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	56732668	98773277	Rat
1300172	Bp172	Blood pressure QTL 172	3.56		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	32737273	90665040	Rat
61344	Bp29	Blood pressure QTL 29	7.5		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	78350581	123350581	Rat
1358192	Ept13	Estrogen-induced pituitary tumorigenesis QTL 13	3.4		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	1	77494165	122494165	Rat
2313094	Bss58	Bone structure and strength QTL 58	3.7	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	43284731	118944897	Rat
6903308	Scl36	Serum cholesterol QTL 36	2	0.0125	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	53863041	90532583	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	56949932	101949932	Rat
2313099	Bss56	Bone structure and strength QTL 56	2.4	0.0001	tibia size trait (VT:0100001)	tibia midshaft endosteal cross-sectional area (CMO:0001716)	1	43284731	118944897	Rat
2313098	Bmd70	Bone mineral density QTL 70	3.6	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	43284731	118944897	Rat
738022	Anxrr13	Anxiety related response QTL 13	4.6	0.00039	locomotor behavior trait (VT:0001392)	number of 20 x 20 cm floor squares crossed into, out of or within a discrete space in an experimental apparatus (CMO:0001514)	1	83547917	128547917	Rat
152025249	Scl82	Serum cholesterol level QTL 82	4.77		blood cholesterol amount (VT:0000180)		1	50343510	99980958	Rat
10054135	Gmadr2	Adrenal mass QTL 2	1.97	0.0129	adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	77857876	122857876	Rat
7411712	Strs4	Sensitivity to stroke QTL 4	8.7		cerebrum integrity trait (VT:0010549)	percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)	1	78430536	123430536	Rat
2313051	Bss57	Bone structure and strength QTL 57	3.7	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	43284731	118944897	Rat
61433	Cia2	Collagen induced arthritis QTL 2	5		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	78430754	91209302	Rat
724529	Cm16	Cardiac mass QTL 16	2.7		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	1	87580395	150700247	Rat

Genetic Models

This gene Slc7a9 is modified in the following models/strains:

SS-Slc7a9^em1Mcwi SS-Slc7a9^em2Mcwi

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	5	40	78	85	85	57	25	57	3	193	78	63	44	54	28

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_053929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228878	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008759104	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063266018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB029559	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC136661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC081750	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC098909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000016919 ⟹ ENSRNOP00000016919

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	88,110,644 - 88,132,641 (+)	Ensembl
Rnor_6.0 Ensembl	1	91,716,383 - 91,738,494 (+)	Ensembl

RefSeq Acc Id:

NM_053929 ⟹ NP_446381

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	97,246,882 - 97,269,544 (+)	NCBI
mRatBN7.2	1	88,109,979 - 88,132,642 (+)	NCBI
Rnor_6.0	1	91,715,825 - 91,738,490 (+)	NCBI
Rnor_5.0	1	92,836,837 - 92,865,759 (+)	NCBI
RGSC_v3.4	1	87,976,440 - 87,999,102 (+)	RGD
Celera	1	82,459,876 - 82,482,526 (+)	RGD

Sequence:

show sequence

AGGGATCTAGACACAGGGTACCACCATCACCTCTCTACAAGAGTCTTTCTACGTATCCCAGGTT
GGCTTGACTTGCTGAATAGCCCAGGCTGGCCCTGAATTTATCATTTTTCTACCTCAACTACCTC
AGTGCTGGGAGTTCAGCCCCTGGAACTCACAGTGAGCAAGGATGGAGGAGACAAGCCCGAGGAG
ACGGAGAGAGGATGAGAAGTCCGTCCACAGTACAGAGCCCAAGACCACAAGTCTCCAGAAAGAG
GTGGGTCTTCTCAGTGGTATCTGTATCATTGTGGGCACCATCATCGGCTCCGGGATCTTCATCT
CCCCCAAGTCTGTGCTGGCCAACACAGAATCCGTGGGGCCCTGTCTCATCATATGGGCAGCCTG
TGGAGTCCTGGCTACACTGGGCGCCCTGTGCTTTGCAGAGCTTGGCACAATGATCACCAAGTCA
GGGGGTGAGTACCCCTATCTGATGGAGGCCTTCGGCCCCATCCCTGCCTACCTCTTCTCCTGGA
CCAGCCTGATTGTCATGAAGCCCTCATCCTTCGCCATCATCTGCCTCAGCTTTTCAGAGTATGT
GTGTGCGGCCTTTTACTTAGGCTGCAGGCCTCCTGCTGTGGTAGTGAAACTCCTGGCTGCTGCT
GCCATCTTGCTTATCACTACAGTGAATGCGCTGAGCGTGCGGCTTGGCAGCTATGTGCAGAATG
TCTTCACGGCAGCCAAGCTGGTGATCGTCGCCATCATCATCATCAGCGGACTGGTCCTCCTGGC
GCAAGGAAATGTTAAGAACTTTCAGAATTCTTTTGAGGGTTCACAGACCTCTGTGGGCTCCATC
AGCCTGGCATTTTACAACGGACTCTGGGCCTACGATGGGTGGAACCAACTTAACTACATCACTG
AAGAGCTTAGAAACCCTTACAGAAACCTGCCCATGGCCATTGTCATTGGGATCCCTCTGGTGAC
AGTATGCTACATCCTCATGAATATTGCTTACTTCACAGTGATGACCCCAACGGAGCTCTTGCAG
TCCCAGGCTGTGGCTGTGACCTTCGGAGACCGTGTTCTCTATCCGGCATCTTGGGTAGTCCCAC
TTTTTGTGGCATTTTCAACCATTGGTGCTGCGAATGGGACCTGCTTTACGGCGGGCAGGCTCAT
CTATGTGGCGGGCCGGGAAGGCCACATGCTTAAAGTGCTATCCTACATCAGTGTCAAGCGCCTC
ACTCCGGCCCCTGCCCTCGTATTCTATGGCATAATAGCCATCATTTACATCATCCCCGGGGACA
TCAACTCCTTAGTCAATTATTTCAGTTTTGCTGCATGGCTCTTTTATGGCATGACAATCCTAGG
ACTCGTTGTGATGAGATTCACAAGGAAAGACCTAGAGAGGCCCATCAAGGTGCCCATCTTCATC
CCTATCATTGTGATTCTCGTATCTGTTTTCTTGATCCTGGCCCCCATCATCAGTTCGCCAGCCT
GGGAATATCTCTACTGCGTGTTGTTCATACTGAGTGGACTTATATTTTACTTCCTTTTTGTCCA
CTACAAGTTCAGATGGGCCCAGAAAATCTCCAGGCCGATCACCAAGCACCTGCAGATGCTGATG
GAAGTTGTCCCACCAGAGAAGGACCCAGAGTAAAAGGCCCATCACTCGTAGCCCAAAGCTGTGA
TCAATTTATTTTTGTAAGCAATTATTTGTGGTTATTTCTTCCTGGTGTTTTTCTTAATGAAAAC
ATGTATTCAGAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008759103 ⟹ XP_008757325

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	97,246,253 - 97,269,546 (+)	NCBI
mRatBN7.2	1	88,109,517 - 88,132,653 (+)	NCBI
Rnor_6.0	1	91,715,360 - 91,738,492 (+)	NCBI

Sequence:

show sequence

TTTGTCGGGGGATCAAGTCTCCAGAGCCAGCCCGGGGAGATAGTAAAGGGCTGGTTCCAAAGTT
TATTGCTGCGATTCCTCAGTTGATGAGCGGTTTCCATTGCTGCTCTGAAGAGATTTCTCCTCAC
AGGAAGTAGCCGATCTGGAGGAATCCGTTTTACTGCAGAAATGATCTAGATAAACAAAACCAAA
ATGGGGGAAGCTGGACTTGTCTGACCCCCTTATTTTTTGTCTGGTGGTGTCTATCAAGGCTTTG
TTGCTTAGAAGGAAGAAAAAGGGGGAGATGGGTGTTTAATAATTACCTCTGTTGACCTCTGTAC
CTTCTGGCTTCCTCCACGCCTAGGCACAAGACATGGCCCTTCCTGGGGCCTGGCCCTGAGTTGC
GGGCTGGGTGGTGGTCAGCAAGGCAAGCATCATCGGCAAAGACAAGAGTCTTTCTACGTATCCC
AGGTTGGCTTGACTTGCTGAATAGCCCAGGCTGGCCCTGAATTTATCATTTTTCTACCTCAACT
ACCTCAGTGCTGGGAGTTCAGCCCTTGGAACTCACAGTGAGCAAGGATGGAGGAGACAAGCCCG
AGGAGACGGAGAGAGGATGAGAAGTCCGTCCACAGTACAGAGCCCAAGACCACAAGTCTCCAGA
AAGAGGTGGGTCTTCTCAGTGGTATCTGTATCATTGTGGGCACCATCATCGGCTCCGGGATCTT
CATCTCCCCCAAGTCTGTGCTGGCCAACACAGAATCCGTGGGGCCCTGTCTCATCATATGGGCA
GCCTGTGGAGTCCTGGCTACACTGGGCGCCCTGTGCTTTGCAGAGCTTGGCACAATGATCACCA
AGTCAGGGGGTGAGTACCCCTATCTGATGGAGGCCTTCGGCCCCATCCCTGCCTACCTCTTCTC
CTGGACCAGCCTGATTGTCATGAAGCCCTCATCCTTCGCCATCATCTGCCTCAGCTTTTCAGAG
TATGTGTGTGCGGCCTTTTACTTAGGCTGCAGGCCTCCTGCTGTGGTAGTGAAACTCCTGGCTG
CTGCTGCCATCTTGCTTATCACTACAGTGAATGCGCTGAGCGTGCGGCTTGGCAGCTATGTGCA
GAATGTCTTCACGGCAGCCAAGCTGGTGATCGTCGCCATCATCATCATCAGCGGACTGGTCCTC
CTGGCGCAAGGAAATGTTAAGAACTTTCAGAATTCTTTTGAGGGTTCACAGACCTCTGTGGGCT
CCATCAGCCTGGCATTTTACAACGGACTCTGGGCCTACGATGGGTGGAACCAACTTAACTACAT
CACTGAAGAGCTTAGAAACCCTTACAGAAACCTGCCCATGGCCATTGTCATTGGGATCCCTCTG
GTGACAGTATGCTACATCCTCATGAATATTGCTTACTTCACAGTGATGACCCCAACGGAGCTCT
TGCAGTCCCAGGCTGTGGCTGTGACCTTCGGAGACCGTGTTCTCTATCCGGCATCTTGGGTAGT
CCCACTTTTTGTGGCATTTTCAACCATTGGTGCTGCGAATGGGACCTGCTTTACGGCGGGCAGG
CTCATCTATGTGGCGGGCCGGGAAGGCCACATGCTTAAAGTGCTATCCTACATCAGTGTCAAGC
GCCTCACTCCGGCCCCTGCCCTCGTATTCTATGGCATAATAGCCATCATTTACATCATCCCCGG
GGACATCAACTCCTTAGTCAATTATTTCAGTTTTGCTGCATGGCTCTTTTATGGCATGACAATC
CTAGGACTCGTTGTGATGAGATTCACAAGGAAAGACCTAGAGAGGCCCATCAAGGTGCCCATCT
TCATCCCTATCATTGTGATTCTCGTATCTGTTTTCTTGATCCTGGCCCCCATCATCAGTTCGCC
AGCCTGGGAATATCTCTACTGCGTGTTGTTCATACTGAGTGGACTTATATTTTACTTCCTTTTT
GTCCACTACAAGTTCAGATGGGCCCAGAAAATCTCCAGGCCGATCACCAAGCACCTGCAGATGC
TGATGGAAGTTGTCCCACCAGAGAAGGACCCAGAGTAAAAGGCCCATCACTCGTAGCCCAAAGC
TGTGATCAATTTATTTTTGTAAGCAATTATTTGTGGTTATTTCTTCCTGGTGTTTTTCTTAATG
AAAACATGTATTCAGATA

hide sequence

RefSeq Acc Id:

XM_063266018 ⟹ XP_063122088

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	97,246,455 - 97,269,546 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_446381	(Get FASTA)	NCBI Sequence Viewer
	XP_008757325	(Get FASTA)	NCBI Sequence Viewer
	XP_063122088	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH98909	(Get FASTA)	NCBI Sequence Viewer
	BAA85186	(Get FASTA)	NCBI Sequence Viewer
	EDM07620	(Get FASTA)	NCBI Sequence Viewer
	EDM07621	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000016919.2
	ENSRNOP00055006805
	ENSRNOP00060043312
	ENSRNOP00065045457
GenBank Protein	P82252	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_446381 ⟸ NM_053929

- UniProtKB:

Q4KM04 (UniProtKB/Swiss-Prot), P82252 (UniProtKB/Swiss-Prot), A6JAB3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEETSPRRRREDEKSVHSTEPKTTSLQKEVGLLSGICIIVGTIIGSGIFISPKSVLANTESVGP
CLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAFGPIPAYLFSWTSLIVMKPSSFAII
CLSFSEYVCAAFYLGCRPPAVVVKLLAAAAILLITTVNALSVRLGSYVQNVFTAAKLVIVAIII
ISGLVLLAQGNVKNFQNSFEGSQTSVGSISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPMAI
VIGIPLVTVCYILMNIAYFTVMTPTELLQSQAVAVTFGDRVLYPASWVVPLFVAFSTIGAANGT
CFTAGRLIYVAGREGHMLKVLSYISVKRLTPAPALVFYGIIAIIYIIPGDINSLVNYFSFAAWL
FYGMTILGLVVMRFTRKDLERPIKVPIFIPIIVILVSVFLILAPIISSPAWEYLYCVLFILSGL
IFYFLFVHYKFRWAQKISRPITKHLQMLMEVVPPEKDPE

hide sequence

RefSeq Acc Id:	XP_008757325 ⟸ XM_008759103
- Peptide Label:	isoform X1
- UniProtKB:	Q4KM04 (UniProtKB/Swiss-Prot), P82252 (UniProtKB/Swiss-Prot), A6JAB3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEETSPRRRREDEKSVHSTEPKTTSLQKEVGLLSGICIIVGTIIGSGIFISPKSVLANTESVGP CLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAFGPIPAYLFSWTSLIVMKPSSFAII CLSFSEYVCAAFYLGCRPPAVVVKLLAAAAILLITTVNALSVRLGSYVQNVFTAAKLVIVAIII ISGLVLLAQGNVKNFQNSFEGSQTSVGSISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPMAI VIGIPLVTVCYILMNIAYFTVMTPTELLQSQAVAVTFGDRVLYPASWVVPLFVAFSTIGAANGT CFTAGRLIYVAGREGHMLKVLSYISVKRLTPAPALVFYGIIAIIYIIPGDINSLVNYFSFAAWL FYGMTILGLVVMRFTRKDLERPIKVPIFIPIIVILVSVFLILAPIISSPAWEYLYCVLFILSGL IFYFLFVHYKFRWAQKISRPITKHLQMLMEVVPPEKDPE hide sequence

Ensembl Acc Id:

ENSRNOP00000016919 ⟸ ENSRNOT00000016919

RefSeq Acc Id:	XP_063122088 ⟸ XM_063266018
- Peptide Label:	isoform X1
- UniProtKB:	Q4KM04 (UniProtKB/Swiss-Prot), P82252 (UniProtKB/Swiss-Prot), A6JAB3 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P82252-F1-model_v2	AlphaFold	P82252	1-487	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:619905	AgrOrtholog
BioCyc Gene	G2FUF-59972	BioCyc
Ensembl Genes	ENSRNOG00000012344	Ensembl, UniProtKB/Swiss-Prot
	ENSRNOG00055005563	UniProtKB/Swiss-Prot
	ENSRNOG00060029980	UniProtKB/Swiss-Prot
	ENSRNOG00065032084	UniProtKB/Swiss-Prot
Ensembl Transcript	ENSRNOT00000016919.5	UniProtKB/Swiss-Prot
	ENSRNOT00055008939	UniProtKB/Swiss-Prot
	ENSRNOT00060052077	UniProtKB/Swiss-Prot
	ENSRNOT00065055266	UniProtKB/Swiss-Prot
Gene3D-CATH	Amino acid/polyamine transporter I	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7106998	IMAGE-MGC_LOAD
	IMAGE:7109606	IMAGE-MGC_LOAD
InterPro	AA/rel_permease1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	AminoAcid_Transporter	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:116726	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE	MGC:114282	IMAGE-MGC_LOAD
	MGC:93271	IMAGE-MGC_LOAD
NCBI Gene	116726	ENTREZGENE
PANTHER	AMINO ACID TRANSPORTER	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	B(0,+)-TYPE AMINO ACID TRANSPORTER 1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	AA_permease_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Slc7a9	PhenoGen
PIRSF	AA_transporter	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012344	RatGTEx
	ENSRNOG00055005563	RatGTEx
	ENSRNOG00060029980	RatGTEx
	ENSRNOG00065032084	RatGTEx
UniProt	A6JAB3	ENTREZGENE, UniProtKB/TrEMBL
	BAT1_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q4KM04	ENTREZGENE
UniProt Secondary	Q4KM04	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2011-08-01	Slc7a9	solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	Slc7a9	solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-09-10	Slc7a9	solute carrier family 7 (cationic amino acid transporter, y+ system), member 9			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Slc7a9	solute carrier family 7 (cationic amino acid transporter, y+ system), member 9			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	protein localized to apical membranes of the renal proximal tubules in the kidney	727281
gene_protein	protein masses 41 kDa	727281

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

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Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB