Snn (stannin) - Rat Genome Database

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Advanced Search (OLGA)
Gene: Snn (stannin) Rattus norvegicus
Analyze
Symbol: Snn
Name: stannin
RGD ID: 3730
Description: Predicted to enable metal ion binding activity. Predicted to be located in cytoplasm. Predicted to be active in membrane. Orthologous to human SNN (stannin); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 9-cis-retinoic acid.
Type: protein-coding
RefSeq Status: PROVISIONAL
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8105,079,885 - 5,088,565 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl182,440,586 - 82,441,390 (+)EnsemblGRCr8
GRCr8 Ensembl105,079,895 - 5,088,565 (-)EnsemblGRCr8
mRatBN7.2104,572,933 - 4,581,606 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl173,368,397 - 73,369,201 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl104,572,376 - 4,584,021 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx109,269,567 - 9,278,236 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0108,790,670 - 8,799,339 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0104,428,915 - 4,437,584 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0104,635,897 - 4,644,570 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl104,635,898 - 4,644,570 (-)Ensemblrn6Rnor6.0
Rnor_5.0103,465,263 - 3,473,936 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4104,486,038 - 4,494,711 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera103,596,427 - 3,605,100 (-)NCBICelera
RGSC_v3.1104,486,030 - 4,494,681 (-)NCBI
Cytogenetic Map10q11NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
9-cis-retinoic acid  (EXP)
acetamide  (EXP)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
alendronic acid  (EXP)
all-trans-retinoic acid  (ISO)
ammonium chloride  (EXP)
amphetamine  (EXP)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
bexarotene  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP)
bisphenol F  (ISO)
Butylbenzyl phthalate  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
chlorpyrifos  (ISO)
choline  (ISO)
cobalt dichloride  (EXP)
coumestrol  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
dibutyl phthalate  (ISO)
diethyl phthalate  (ISO)
diisobutyl phthalate  (ISO)
diisononyl phthalate  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
Enterolactone  (ISO)
ethanol  (ISO)
folic acid  (ISO)
fulvestrant  (ISO)
L-methionine  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
methylarsonic acid  (ISO)
N-ethyl-N-nitrosourea  (EXP)
nitrates  (ISO)
nitroglycerin  (EXP)
Nutlin-3  (ISO)
oxaliplatin  (EXP)
paracetamol  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
pirinixic acid  (ISO)
raloxifene  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
tert-butyl hydroperoxide  (ISO)
thiram  (ISO)
titanium dioxide  (ISO)
topotecan  (EXP)
Tributyltin oxide  (EXP)
trichostatin A  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (ISO)
valsartan  (ISO)
vinclozolin  (EXP)
vincristine  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. GOA pipeline RGD automated data pipeline
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Molecular neurotoxicology of trimethyltin: identification of stannin, a novel protein expressed in trimethyltin-sensitive cells. Toggas SM, etal., Mol Pharmacol 1992 Jul;42(1):44-56.
Additional References at PubMed
PMID:9413842   PMID:12477932   PMID:15923056   PMID:16246365  


Genomics

Comparative Map Data
Snn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8105,079,885 - 5,088,565 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl182,440,586 - 82,441,390 (+)EnsemblGRCr8
GRCr8 Ensembl105,079,895 - 5,088,565 (-)EnsemblGRCr8
mRatBN7.2104,572,933 - 4,581,606 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl173,368,397 - 73,369,201 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl104,572,376 - 4,584,021 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx109,269,567 - 9,278,236 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0108,790,670 - 8,799,339 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0104,428,915 - 4,437,584 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0104,635,897 - 4,644,570 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl104,635,898 - 4,644,570 (-)Ensemblrn6Rnor6.0
Rnor_5.0103,465,263 - 3,473,936 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4104,486,038 - 4,494,711 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera103,596,427 - 3,605,100 (-)NCBICelera
RGSC_v3.1104,486,030 - 4,494,681 (-)NCBI
Cytogenetic Map10q11NCBI
SNN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381611,668,455 - 11,679,152 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1611,668,027 - 11,679,159 (+)Ensemblhg38GRCh38
GRCh371611,762,311 - 11,773,008 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361611,669,802 - 11,680,507 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341611,669,817 - 11,680,508NCBI
Celera1611,936,631 - 11,947,357 (+)NCBICelera
Cytogenetic Map16p13.13NCBI
HuRef1611,678,216 - 11,689,048 (+)NCBIHuRef
CHM1_11611,762,761 - 11,772,943 (+)NCBICHM1_1
T2T-CHM13v2.01611,704,503 - 11,715,200 (+)NCBIT2T-CHM13v2.0
Snn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391610,884,162 - 10,892,849 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1610,878,809 - 10,892,849 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381611,066,298 - 11,074,985 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1611,060,945 - 11,074,985 (+)Ensemblmm10GRCm38
MGSCv371611,066,391 - 11,075,078 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361610,979,939 - 10,988,556 (+)NCBIMGSCv36mm8
Celera1611,696,549 - 11,705,247 (+)NCBICelera
Cytogenetic Map16A1NCBI
cM Map166.32NCBI
Snn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554426,959,325 - 6,969,268 (-)Ensembl
ChiLan1.0NW_0049554426,959,325 - 6,969,268 (-)NCBIChiLan1.0ChiLan1.0
SNN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21812,217,437 - 12,228,183 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11615,988,273 - 15,998,999 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01610,609,810 - 10,620,547 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11611,838,285 - 11,846,749 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1611,843,646 - 11,843,912 (+)EnsemblpanPan2panpan1.1
SNN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1631,137,752 - 31,147,107 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl631,140,375 - 31,140,638 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha632,517,907 - 32,527,806 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0631,316,213 - 31,326,110 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
UMICH_Zoey_3.1631,130,281 - 31,140,169 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0631,004,473 - 31,014,352 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0631,428,849 - 31,438,745 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Snn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344111,644,382 - 111,647,360 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365309,489,909 - 9,490,175 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365309,489,787 - 9,492,731 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SNN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl331,448,340 - 31,448,603 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1331,445,576 - 31,455,427 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2332,439,691 - 32,447,181 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SNN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1511,133,096 - 11,143,727 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl511,140,630 - 11,140,896 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366606819,003,377 - 19,014,047 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Snn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247826,637,704 - 6,647,163 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247826,637,711 - 6,647,900 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Snn
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1911,251,215 - 11,259,897 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Snn
19 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:53
Count of miRNA genes:51
Interacting mature miRNAs:53
Transcripts:ENSRNOT00000003333
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135730538Rat
7387235Uae41Urinary albumin excretion QTL 415.260.1874urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)10130004247Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1092219745922197Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)10210370847103708Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10125055464349221Rat
1549898Neuinf3Neuroinflammation QTL 326.4nervous system integrity trait (VT:0010566)MHC Class II RT1A-positive spinal cord ventral horn area to total spinal cord ventral horn area ratio (CMO:0001980)1015893911Rat
631828Alc5Alcohol consumption QTL 52.4consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)10117749933Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138832698Rat

Markers in Region
D10Bda4  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2104,573,069 - 4,573,243 (+)MAPPERmRatBN7.2
Rnor_6.0104,636,034 - 4,636,207NCBIRnor6.0
Rnor_5.0103,465,400 - 3,465,573UniSTSRnor5.0
RGSC_v3.4104,486,175 - 4,486,348UniSTSRGSC3.4
Celera103,596,564 - 3,596,737UniSTS
Cytogenetic Map10q11UniSTS
RH136895  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2104,573,035 - 4,573,226 (+)MAPPERmRatBN7.2
Rnor_6.0104,636,000 - 4,636,190NCBIRnor6.0
Rnor_5.0103,465,366 - 3,465,556UniSTSRnor5.0
RGSC_v3.4104,486,141 - 4,486,331UniSTSRGSC3.4
Celera103,596,530 - 3,596,720UniSTS
Cytogenetic Map10q11UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 163 91 90 59 92 59 6 356 192 11 142 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000088279   ⟹   ENSRNOP00000074283
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl105,079,895 - 5,088,565 (-)Ensembl
mRatBN7.2 Ensembl104,572,926 - 4,581,177 (-)Ensembl
Rnor_6.0 Ensembl104,635,898 - 4,644,570 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000111418   ⟹   ENSRNOP00000077483
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl182,440,586 - 82,441,390 (+)Ensembl
mRatBN7.2 Ensembl173,368,397 - 73,369,201 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000116003   ⟹   ENSRNOP00000080199
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl104,572,376 - 4,584,021 (-)Ensembl
RefSeq Acc Id: NM_001034083   ⟹   NP_001029255
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8105,079,892 - 5,088,565 (-)NCBI
mRatBN7.2104,572,933 - 4,581,606 (-)NCBI
Rnor_6.0104,635,897 - 4,644,570 (-)NCBI
Rnor_5.0103,465,263 - 3,473,936 (-)NCBI
RGSC_v3.4104,486,038 - 4,494,711 (-)RGD
Celera103,596,427 - 3,605,100 (-)RGD
Sequence:
RefSeq Acc Id: XM_063268793   ⟹   XP_063124863
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8105,079,885 - 5,088,471 (-)NCBI
RefSeq Acc Id: XM_063268794   ⟹   XP_063124864
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8105,079,885 - 5,088,320 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001029255 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124863 (Get FASTA)   NCBI Sequence Viewer  
  XP_063124864 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI00112 (Get FASTA)   NCBI Sequence Viewer  
  EDL96203 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000074283
  ENSRNOP00000074283.1
  ENSRNOP00000080199.1
GenBank Protein P61808 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001029255   ⟸   NM_001034083
- UniProtKB: Q498Q9 (UniProtKB/Swiss-Prot),   P61808 (UniProtKB/Swiss-Prot),   A6K4I1 (UniProtKB/TrEMBL),   A0A8I5XW66 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000074283   ⟸   ENSRNOT00000088279
Ensembl Acc Id: ENSRNOP00000080199   ⟸   ENSRNOT00000116003
RefSeq Acc Id: XP_063124863   ⟸   XM_063268793
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063124864   ⟸   XM_063268794
- Peptide Label: isoform X2
- UniProtKB: Q498Q9 (UniProtKB/Swiss-Prot),   P61808 (UniProtKB/Swiss-Prot),   A6K4I1 (UniProtKB/TrEMBL),   A0A8I5XW66 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000077483   ⟸   ENSRNOT00000111418
Protein Domains
Stannin cytoplasmic   Stannin transmembrane   Stannin unstructured linker

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P61808-F1-model_v2 AlphaFold P61808 1-88 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13696937
Promoter ID:EPDNEW_R7461
Type:multiple initiation site
Name:Snn_1
Description:stannin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0104,644,595 - 4,644,655EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:3730 AgrOrtholog
BioCyc Gene G2FUF-26158 BioCyc
Ensembl Genes ENSRNOG00000058739 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00000068712 Ensembl
Ensembl Transcript ENSRNOT00000088279 ENTREZGENE
  ENSRNOT00000088279.2 UniProtKB/Swiss-Prot
  ENSRNOT00000116003.1 UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.280.20 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7380565 IMAGE-MGC_LOAD
InterPro SNN_cytoplasm UniProtKB/Swiss-Prot
  SNN_linker UniProtKB/Swiss-Prot
  SNN_transmemb UniProtKB/Swiss-Prot
  Stannin UniProtKB/Swiss-Prot
  Stannin_sf UniProtKB/Swiss-Prot
KEGG Report rno:29140 UniProtKB/Swiss-Prot
MGC_CLONE MGC:112928 IMAGE-MGC_LOAD
NCBI Gene 29140 ENTREZGENE
PANTHER PTHR28564 UniProtKB/Swiss-Prot
  STANNIN UniProtKB/Swiss-Prot
Pfam SNN_cytoplasm UniProtKB/Swiss-Prot
  SNN_linker UniProtKB/Swiss-Prot
  SNN_transmemb UniProtKB/Swiss-Prot
PhenoGen Snn PhenoGen
RatGTEx ENSRNOG00000058739 RatGTEx
  ENSRNOG00000068712 RatGTEx
UniProt A0A8I5XW66 ENTREZGENE, UniProtKB/TrEMBL
  A6K4I1 ENTREZGENE, UniProtKB/TrEMBL
  P61808 ENTREZGENE
  Q498Q9 ENTREZGENE
  SNN_RAT UniProtKB/Swiss-Prot
UniProt Secondary O88369 UniProtKB/Swiss-Prot
  Q498Q9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-06-10 Snn  stannin       Name updated 70584 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression protein exressed in neurons in the hippocampus and entorhinal cortex, mRNA also expressed in pyramidal and dentate gyrus neurons 70016
gene_protein predicted protein consists of 88 aa residues and masses 10 kDa 70016