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Gene: Epb41l2 (erythrocyte membrane protein band 4.1-like 2) Rattus norvegicus

Analyze

Symbol:

Epb41l2

Name:

erythrocyte membrane protein band 4.1-like 2

RGD ID:

1563977

Description:

Predicted to enable PH domain binding activity and spectrin binding activity. Predicted to be involved in actomyosin structure organization and positive regulation of protein localization to cell cortex. Predicted to be located in cell cortex; cell junction; and nucleoplasm. Predicted to be part of COP9 signalosome. Predicted to be active in cytoskeleton and plasma membrane. Orthologous to human EPB41L2 (erythrocyte membrane protein band 4.1 like 2); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-diaminodiphenylmethane.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

band 4.1-like protein 2; Epb4.1l2; LOC309557; RGD1563977; similar to protein 4.1G

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	21,682,336 - 21,857,106 (-)	NCBI		GRCr8
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	19,863,009 - 20,037,721 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	19,639,735 - 19,814,553 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	25,632,792 - 25,807,979 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	19,839,607 - 20,014,375 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	20,881,820 - 21,067,713 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	20,893,995 - 20,962,526 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	22,362,883 - 22,548,596 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	20,343,833 - 20,519,742 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	18,137,515 - 18,312,175 (+)	NCBI		Celera
Cytogenetic Map	1	p12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Liver Cirrhosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1-naphthyl isothiocyanate (EXP)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3,4-methylenedioxymethamphetamine (ISO)

4,4'-diaminodiphenylmethane (EXP)

6-propyl-2-thiouracil (EXP)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

Aroclor 1254 (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

azathioprine (ISO)

benzo[a]pyrene (ISO)

beta-lapachone (ISO)

bisphenol A (EXP,ISO)

Bisphenol B (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

CGP 52608 (ISO)

cisplatin (ISO)

clotrimazole (EXP)

copper atom (ISO)

copper(0) (ISO)

coumarin (ISO)

coumestrol (ISO)

cyclophosphamide (ISO)

cyclosporin A (ISO)

deoxynivalenol (ISO)

diarsenic trioxide (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP,ISO)

dicrotophos (ISO)

diethylstilbestrol (ISO)

diquat (ISO)

diuron (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

endosulfan (EXP)

enzyme inhibitor (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

FR900359 (ISO)

genistein (ISO)

glyphosate (ISO)

ivermectin (ISO)

methimazole (EXP)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

methylseleninic acid (ISO)

mitoxantrone (ISO)

N-nitrosodimethylamine (EXP)

oxaliplatin (EXP)

ozone (ISO)

pirinixic acid (ISO)

piroxicam (ISO)

resveratrol (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sodium fluoride (ISO)

Soman (EXP)

succimer (ISO)

sulfadimethoxine (EXP)

T-2 toxin (ISO)

tamoxifen (ISO)

tert-butyl hydroperoxide (ISO)

tetrachloromethane (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

topotecan (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triclosan (ISO)

triphenyl phosphate (ISO)

tungsten (ISO)

valproic acid (ISO)

vinclozolin (EXP)

vitamin E (ISO)

vorinostat (ISO)

zearalenone (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

actomyosin structure organization (IBA)

cortical actin cytoskeleton organization (IEA)

positive regulation of protein localization to cell cortex (ISO)

Cellular Component

cell cortex (ISO)

cell junction (ISO)

COP9 signalosome (ISO)

cytoskeleton (IBA)

nucleoplasm (ISO)

plasma membrane (IBA,ISO)

Molecular Function

actin binding (IEA)

PH domain binding (ISO)

protein binding (ISO)

spectrin binding (ISO)

structural molecule activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:11274145	PMID:12974671	PMID:15372499	PMID:15632090	PMID:18796539	PMID:18850735	PMID:20458337	PMID:21423176	PMID:21898413	PMID:22871113	PMID:23376485	PMID:23870127
PMID:31505169

Genomics

Comparative Map Data

Epb41l2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	21,682,336 - 21,857,106 (-)	NCBI		GRCr8
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	19,863,009 - 20,037,721 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	19,639,735 - 19,814,553 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	25,632,792 - 25,807,979 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	19,839,607 - 20,014,375 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	20,881,820 - 21,067,713 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	20,893,995 - 20,962,526 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	22,362,883 - 22,548,596 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	20,343,833 - 20,519,742 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	18,137,515 - 18,312,175 (+)	NCBI		Celera
Cytogenetic Map	1	p12	NCBI

EPB41L2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	130,839,347 - 131,063,245 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	130,839,347 - 131,063,322 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	131,160,487 - 131,384,385 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	131,202,180 - 131,319,333 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	131,202,182 - 131,426,015	NCBI
Celera	6	131,906,821 - 132,131,081 (-)	NCBI		Celera
Cytogenetic Map	6	q23.1-q23.2	NCBI
HuRef	6	128,741,776 - 128,965,809 (-)	NCBI		HuRef
CHM1_1	6	131,423,545 - 131,647,537 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	132,034,412 - 132,258,670 (-)	NCBI		T2T-CHM13v2.0

Epb41l2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	25,235,680 - 25,399,413 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	25,235,696 - 25,399,417 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	25,359,782 - 25,523,519 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	25,359,798 - 25,523,519 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	25,128,178 - 25,243,320 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	25,131,003 - 25,202,496 (+)	NCBI		MGSCv36	mm8
Celera	10	26,350,009 - 26,458,273 (+)	NCBI		Celera
Cytogenetic Map	10	A4	NCBI
cM Map	10	12.26	NCBI

Epb41l2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955436	11,650,584 - 11,805,822 (-)	NCBI	ChiLan1.0	ChiLan1.0

EPB41L2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	150,848,004 - 151,071,006 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	148,753,557 - 148,977,798 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	128,640,840 - 128,865,043 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	132,747,326 - 132,971,134 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	132,747,326 - 132,878,021 (-)	Ensembl	panpan1.1		panPan2

EPB41L2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	69,120,583 - 69,274,433 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	69,121,139 - 69,286,381 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	69,870,056 - 70,062,791 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	69,349,005 - 69,541,255 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	69,358,773 - 69,451,130 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	69,266,575 - 69,459,216 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	69,039,319 - 69,231,857 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	69,698,102 - 69,891,156 (-)	NCBI		UU_Cfam_GSD_1.0

Epb41l2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	119,371,237 - 119,560,612 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936790	486,037 - 572,973 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936790	401,940 - 590,111 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EPB41L2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	32,418,217 - 32,630,638 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	32,418,210 - 32,630,643 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	35,916,762 - 36,027,418 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EPB41L2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	42,490,435 - 42,721,896 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	42,576,726 - 42,678,386 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	14,631,022 - 14,858,307 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Epb41l2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	5,023,970 - 5,146,595 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624753	5,023,970 - 5,240,063 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Epb41l2
1021 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	1215
Count of miRNA genes:	217
Interacting mature miRNAs:	251
Transcripts:	ENSRNOT00000017322, ENSRNOT00000017412, ENSRNOT00000017417, ENSRNOT00000061332
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631688	Hcas2	Hepatocarcinoma susceptibility QTL 2	3	0.0001	liver integrity trait (VT:0010547)	liver tumorous lesion number (CMO:0001068)	1	5925874	115540829	Rat
1578650	Bmd6	Bone mineral density QTL 6	12.2		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	1	509108	43284926	Rat
1354647	Despr8	Despair related QTL 8		0.0000341	locomotor behavior trait (VT:0001392)	amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)	1	1	24744506	Rat
1578651	Bmd7	Bone mineral density QTL 7	14.2		femur mineral mass (VT:0010011)	compact volumetric bone mineral density (CMO:0001730)	1	509108	43284926	Rat
2313062	Bmd73	Bone mineral density QTL 73	3.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	11481312	82174945	Rat
1554320	Bmd1	Bone mineral density QTL 1	12.2	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	1	509108	86060548	Rat
2313065	Bss67	Bone structure and strength QTL 67	3.1	0.0001	tibia area (VT:1000281)	tibia total energy absorbed before break (CMO:0001736)	1	11481312	82174945	Rat
7421626	Bp360	Blood pressure QTL 360		0.001	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	1	4393289	49393289	Rat
2313070	Bss52	Bone structure and strength QTL 52	4.4	0.0001	body length (VT:0001256)	body length (CMO:0000013)	1	1	32356093	Rat
2313069	Bss68	Bone structure and strength QTL 68	2.9	0.0001	tibia size trait (VT:0100001)	tibia total energy absorbed before break (CMO:0001736)	1	11481312	82174945	Rat
631494	Bp95	Blood pressure QTL 95	40	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	16206210	49268520	Rat
2313075	Bss66	Bone structure and strength QTL 66	3.4	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	11481312	82174945	Rat
5684998	Bss101	Bone structure and strength QTL 101	3.6		tibia strength trait (VT:1000284)	tibia ultimate force (CMO:0001734)	1	15431621	49361612	Rat
2298546	Neuinf4	Neuroinflammation QTL 4	5.1		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	1	1	28736750	Rat
5684999	Bss102	Bone structure and strength QTL 102	5.5	7e-07	tibia strength trait (VT:1000284)	tibia stiffness (CMO:0001735)	1	15431621	49361612	Rat
1300167	Hrtrt2	Heart rate QTL 2	4.35		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	1	11481312	75088344	Rat
2313077	Bss69	Bone structure and strength QTL 69	3.5	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	11481312	82174945	Rat
2317755	Glom22	Glomerulus QTL 22	3.8		urine protein amount (VT:0005160)	urine protein level (CMO:0000591)	1	11481482	32355910	Rat
1578756	Iddm22	Insulin dependent diabetes mellitus QTL 22	2.7		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	11835181	56835181	Rat
631508	Sald1	Serum aldosterone level QTL 1	3.7		blood aldosterone amount (VT:0005346)	serum aldosterone level (CMO:0000487)	1	9856001	54856001	Rat
2313090	Bmd69	Bone mineral density QTL 69	4.4	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	1	32356093	Rat
4889451	Eae29	Experimental allergic encephalomyelitis QTL 29	5.51		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis severity score (CMO:0001419)	1	5925877	24697545	Rat
2313092	Bmd72	Bone mineral density QTL 72	2.5	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	11481312	82174945	Rat
2313097	Bss70	Bone structure and strength QTL 70	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	11481312	82174945	Rat
738020	Pia8	Pristane induced arthritis QTL 8	4.7		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	1	1	65833076	Rat
1600360	Mcs16	Mammary carcinoma susceptibility QTL 16	2.4		mammary gland integrity trait (VT:0010552)	mammary tumor number (CMO:0000343)	1	2244390	43433040	Rat
1578669	Bss9	Bone structure and strength QTL 9	6.3		femur morphology trait (VT:0000559)	bone trabecular cross-sectional area (CMO:0002311)	1	509108	43284926	Rat
2302038	Pia31	Pristane induced arthritis QTL 31	5.5	0.001	blood autoantibody amount (VT:0003725)	serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)	1	10992065	55992065	Rat
634353	Rends2	Renal damage susceptibility QTL 2		0.05	kidney blood vessel morphology trait (VT:0000530)	organ lesion measurement (CMO:0000677)	1	19333571	56983283	Rat
2313053	Bss51	Bone structure and strength QTL 51	3.8	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	1	32356093	Rat

Markers in Region

RH142843

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	19,943,995 - 19,944,103 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	20,962,634 - 20,962,741	NCBI	Rnor6.0
Rnor_5.0	1	22,443,683 - 22,443,790	UniSTS	Rnor5.0
RGSC_v3.4	1	20,424,399 - 20,424,506	UniSTS	RGSC3.4
Celera	1	18,231,188 - 18,231,295	UniSTS
RH 3.4 Map	1	191.9	UniSTS
Cytogenetic Map	1	p12	UniSTS

RH129243

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	19,863,080 - 19,863,272 (+)	MAPPER	mRatBN7.2
Rnor_6.0	1	20,881,891 - 20,882,082	NCBI	Rnor6.0
Rnor_5.0	1	22,362,954 - 22,363,145	UniSTS	Rnor5.0
RGSC_v3.4	1	20,343,340 - 20,343,531	UniSTS	RGSC3.4
Celera	1	18,311,913 - 18,312,104	UniSTS
RH 3.4 Map	1	188.0	UniSTS
Cytogenetic Map	1	p12	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001400827	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587773	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587774	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587779	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587780	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587781	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587793	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587794	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017587795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589840	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589851	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589857	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589861	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589862	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589863	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589864	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099094	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099143	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265422	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265461	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265477	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265495	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265510	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265514	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265540	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063265551	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH474124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ212032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ226348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000017322 ⟹ ENSRNOP00000017322

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	19,863,016 - 20,037,712 (-)	Ensembl
Rnor_6.0 Ensembl	1	20,893,995 - 20,962,526 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000017412 ⟹ ENSRNOP00000017412

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	19,863,009 - 20,037,721 (-)	Ensembl
Rnor_6.0 Ensembl	1	20,893,995 - 20,962,526 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000017417 ⟹ ENSRNOP00000017417

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	19,863,009 - 20,037,721 (-)	Ensembl
Rnor_6.0 Ensembl	1	20,893,995 - 20,962,526 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000061332 ⟹ ENSRNOP00000058049

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	19,863,016 - 20,037,712 (-)	Ensembl
Rnor_6.0 Ensembl	1	20,893,995 - 20,962,526 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000079688 ⟹ ENSRNOP00000071713

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	19,863,016 - 20,037,712 (-)	Ensembl
Rnor_6.0 Ensembl	1	20,893,995 - 20,962,526 (-)	Ensembl

RefSeq Acc Id:

NM_001400827 ⟹ NP_001387756

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,105 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,793 (-)	NCBI

RefSeq Acc Id:

XM_017589862 ⟹ XP_017445351

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,073 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,759 (-)	NCBI
Rnor_6.0	1	20,881,820 - 21,067,667 (-)	NCBI

Sequence:

show sequence

TCTCTGACGGCCCCAGCCAGGGAATTTCAATTTGAAACCCGGTGGAGGGTGGAGGCGGCGGGAG
CGGAGGACTGCGTCCGGGGCTGGAGCGGGACGCGTCCCCGGGACGAGCAAGCTCGTGAGGGGCG
GGTCCGGATCTGTGTGGAGGGCAGCGACTGCCATTTCTGCACCCCCAATCCTCTGGCTCGTCCA
GCACTCCTCCTACACTCACGGCTTCCTTCACGCCGGCCAGTGTTTTCCAGTGTGTGGCGTGTCT
GCTAGCTCCTCAGTTGAGCTTACTCCTCTCATTTTATTCTTTTTGAAGTGTAAGCTGTAACCAT
GACTACTGAAGTTGCCTCTGCATCTGAAGTGAAGAAGGGCTCTGACCCATCGGGAGCAGATGCC
CACAAGGAGAAAGCTAAAGAAGTAGTAGAGAATGAGCAGACTGCAGCGTCTGAGCTGGACGAAG
GGAAAGCCTCCCAGCCAGGCCCTACAGCTGAAAGCCAAAGCAGTCCCCACCGGCGGAAGCGAGG
GAAGGATCCATCTGAGAACAGGGGCATCTCTCGCTTCATACCCCCATGGCTTAAGAAGCAGAAG
TCTTACAGCCTTGTAGTAGCCAAAGATGGCGGAGATAAAAAAGAGCCTACTCAAGCTGATGGGG
AAGACCAGATCCTAGACAAAGAGGATACCCTTCCCGAAGAAGAGAGTCGGGCCAAGGGGGATGC
AGAAGAAATGGCTCAGAGGAAGCACCTGGAGGTTAAGGTGGAGGTCAGGGAAGAAAAATCAGCC
TTGAAAAGCAGTGCTGAGATCCAGCCTGCTGAACAAGTGAGGAAGGACAAGGAGGAGGAAGTGA
TACAGGATATACAGGAAGAGAAACTGGAAGGAGGTGCAGCCAAAAGAGAGACAAAGGAAGTTCA
GACAAGTGAGCTGAAGGCAGAGGTGGCCTCTCAGAAAGCCGCCAAGAAGACCAAGACTGTCCTG
GCCAAAGTGACCCTCCTAGATGGCACAGAATTCAGCTGTGACCTTGAGAAACGCGCTAAGGGAC
AAGCGTTGTTTGACAGAGTGTGTGAGCACCTGAACCTCTTGGAGAAGGACTACTTTGGACTTAT
ATTTCAGGAGCATCCCGAGCAGAAAAACTGGCTAGATCCTGCAAAGGAAATAAAGAGACAGCTG
AGAAGTCTTCCCTGGCTGTTCACTTTCAATGTGAAATTTTACCCTCCGGATCCTTCTCAGCTGA
CTGAAGACATCACCAGATACTTCCTATGCCTTCAGCTGAGGCAGGACATCTCCTCTGGCCGCCT
GCCCTGCTCCTTTGTGACTCACGCCCTCTTGGGGTCCTACACCCTGCAGGCTGAGCATGGGGAC
TATGACCCAGAAGAGTATGACAGTATTGATCTTGGTGACTTCCAGTTTGCCCCAACCCACAACA
AGGAGCTGGAGGAAAAGGTGGCAGAACTGCATAAAACTCACAGGGGCTTATCTCCAGCCCAGGC
TGATTCTCAGTTCTTAGAAAATGCGAAGAGGCTTTCCATGTACGGCGTTGACCTGCACCATGCC
AAGGACTCTGAAGGTGTGGACATCAAGCTGGGTGTGTGCGCTAATGGCCTTCTCATTTACAAAG
ACAGACTGAGAATCAATCGCTTTGCTTGGCCGAAGATTTTGAAGATTTCCTATAAGCGAAGTAA
TTTCTACATTAAAGTTAGACCAGGAGAGCTGGAACAGTTTGAGAGCACCATTGGATTCAAACTA
CCAAACCACCGGGCAGCTAAAAGGCTATGGAAAGTCTGTGTGGAGCATCACACTTTCTACAGAC
TCGTGTCTCCAGAGCAGCCACCAAAGACCAAGTTCTTGACCCTGGGGTCCAAATTCCGCTACAG
TGGCCGCACGCAGGCGCAGACACGAGAAGCAAGCACCCTCATAGACAGGCCGGCGCCACAGTTT
GAGCGCGCCTCTAGTAAGCGCGTCTCGAGGAGCCTAGATGGAGCCCCGATTGGTGTTGTGGACC
AAAGTCTTATGAAGGATTTTCCGGGCCCTCCTGGAGAGGGATCAGTGCCTGGCCCTGGAGTTGT
CAGCTATACTACAGTCCAGGATGGCCGGAGGGACGGCAAGAGCCCAACTAAAGTCACACCCCTG
CTCGCTGAGGGAAAGAGTTCACATGAGACTCTGAATGTAGTGGAGGAGAAGAAGCGGGCAGAGG
TTGGGAAAGGCGAAAGCGTAATCACAGAAGAAATGAATGGTAAAGAGCTGTCACCGGGGAGTGG
TCCTGGGGAGACTCGTAAGGTGGAGCCTATGGCACACAAAGACTCCACCTCCCTGTCTTCTGAG
AGCAGCAGCAGCAGCAGTGAGAGTGAGGAGGACGTGGGCGAGTACCAGCCCCACCACCGAGTGA
CCGAGGGCACCATAAGGGAAGAGCAGGAGTATGAAGAAGAGCTGGAGGAAGAACCCGGCCAAGG
CGCCAAGATTGACGGCGGGGCTGGTGGTGATTCGGGCGTGTTACTGACCGCACAAACCATCACA
TCTGAGTCCGCGTCAACAACGACCACCACACACATCACCAAGACTGTGAAAGGTGGGATCTCAG
AAACACGGATTGAGAAACGCATTGTGATCACAGGAGACGCGGCTCTGGATCATGATCAGGCGCT
GGCTCAGGCCATACGGGAGGCCAGAGAGCAACACCCTGATATGTCGGTCACAAGGGTGGTAGTG
CACAAAGAGACAGAGTTGGCGGAGGAAGGAGAAGACTAAGAAAGTCTTTTTTTAAACAACATTT
AACTTCATGAGTCTGAAGAACTTTGACCATTCCAAGTCTTAACGCCACACCACTACTCCAGCAG
CAAAATTGTACTCCGGCAATGACCAGAAGCCTGAAGAATTAAAAGCCAACAGCAAACTGTACCT
TAACAGCTCTGGTCTCTACTCTCCCATACATATCTAATATATTATTGTTTTATAACCACTTCTA
GACACCCTTGCTCCCCTATTTTTCTTTCTTTCCCTGCTGTCCTTTTTTTCTTTTTTTTTTTTTA
AGTCTTTGTTTTTTATTAGGGATTTGTATTTGTTTCCTGTCCCTACCTGCTTTTTTTGACTCGT
TTGATCAAATGACAGTGAACAAAGCCAGCCGGGCTGGTAAGGTGCCGTTCACTTGAACAGGTGC
TGTTATGTGGAAAGGAAACTCTGTAACTAATTTAGATAGCAATTTTCATTCTTCAAGATTGTTT
CCATTCAACTCTTACAGCGAATATTTAGTTTTCAGACTGCAGTAGTTATACTGCGTGAGAACAT
ATTAATACCGATTAAAAGCATTTCTTACATCTTAAAATTTTTCTAATATTAGGAAGTTTCATTA
TGGATGATTTTTACATTGACCATTGACCTTCCAGTCCTATGTCTTTGTACTTTATTAGAGTCCG
AGACTCTCTGGACTGGAGAATTACGAAGCTCACTGACCGGGTCTGTGTGAGAGACCGTCGGTCC
GCAGTGCAGTGCTTCTCAGACATGCGCTTTGCCACAGCATTCCAGAGCAGGAGAACCGCTCCAT
GTGCCCTTCCTGTTACTAAAAGAAATCCAGGCAGCTTCGAGCCTTAGAGCTTCCTTTCTTAACC
TTCCCTATCCCAGTTCTTCCCATTATCGGAACACTTGAGTAGAACACTCGCTTTGTACGAAACT
CCTCTGTCTCCATGTAAACTGACCCTCTGCCACTGGGCAGGTATTTCTGAGATAGTTTGAGGAC
TCGCAGCTTTGTGGATGCTGGGGAGACCAGGTTGGGGGACAGTGGGGATTTGGTTGTAAGAAAG
CTGTACCATGTAAAGCTAACACCAGAGCTGATAGGGATTTATTAACTGTATTGAACATTTTCTC
ATTTGCTTTTGACTATGTATAGTTATGACGCCTGATTAGATTTATTGCAGCTTCAAGTTGTGTT
AAATGATATTTTGCTTTATGTAATACTGTTAAAAAATAAAAGTTTGTTTATTCTA

hide sequence

RefSeq Acc Id:

XM_039099066 ⟹ XP_038954994

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,106 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099076 ⟹ XP_038955004

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099083 ⟹ XP_038955011

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099094 ⟹ XP_038955022

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099103 ⟹ XP_038955031

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099113 ⟹ XP_038955041

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099119 ⟹ XP_038955047

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099123 ⟹ XP_038955051

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099128 ⟹ XP_038955056

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099134 ⟹ XP_038955062

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_039099143 ⟹ XP_038955071

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI
mRatBN7.2	1	19,863,010 - 20,037,795 (-)	NCBI

RefSeq Acc Id:

XM_063265376 ⟹ XP_063121446

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,803,775 (-)	NCBI

RefSeq Acc Id:

XM_063265386 ⟹ XP_063121456

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,074 (-)	NCBI

RefSeq Acc Id:

XM_063265395 ⟹ XP_063121465

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,803,776 (-)	NCBI

RefSeq Acc Id:

XM_063265403 ⟹ XP_063121473

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,778,713 (-)	NCBI

RefSeq Acc Id:

XM_063265410 ⟹ XP_063121480

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,776,751 (-)	NCBI

RefSeq Acc Id:

XM_063265418 ⟹ XP_063121488

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,778,713 (-)	NCBI

RefSeq Acc Id:

XM_063265422 ⟹ XP_063121492

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265430 ⟹ XP_063121500

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,074 (-)	NCBI

RefSeq Acc Id:

XM_063265431 ⟹ XP_063121501

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265433 ⟹ XP_063121503

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265440 ⟹ XP_063121510

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265444 ⟹ XP_063121514

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,073 (-)	NCBI

RefSeq Acc Id:

XM_063265449 ⟹ XP_063121519

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,776,737 (-)	NCBI

RefSeq Acc Id:

XM_063265451 ⟹ XP_063121521

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,781,861 (-)	NCBI

RefSeq Acc Id:

XM_063265452 ⟹ XP_063121522

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265458 ⟹ XP_063121528

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265461 ⟹ XP_063121531

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265468 ⟹ XP_063121538

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265470 ⟹ XP_063121540

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265473 ⟹ XP_063121543

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265475 ⟹ XP_063121545

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,803,738 (-)	NCBI

RefSeq Acc Id:

XM_063265477 ⟹ XP_063121547

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,080 (-)	NCBI

RefSeq Acc Id:

XM_063265480 ⟹ XP_063121550

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,803,740 (-)	NCBI

RefSeq Acc Id:

XM_063265483 ⟹ XP_063121553

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,781,846 (-)	NCBI

RefSeq Acc Id:

XM_063265490 ⟹ XP_063121560

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,839,687 (-)	NCBI

RefSeq Acc Id:

XM_063265492 ⟹ XP_063121562

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,034 (-)	NCBI

RefSeq Acc Id:

XM_063265495 ⟹ XP_063121565

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,781,846 (-)	NCBI

RefSeq Acc Id:

XM_063265501 ⟹ XP_063121571

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,778,699 (-)	NCBI

RefSeq Acc Id:

XM_063265508 ⟹ XP_063121578

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265510 ⟹ XP_063121580

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,776,730 (-)	NCBI

RefSeq Acc Id:

XM_063265513 ⟹ XP_063121583

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265514 ⟹ XP_063121584

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265521 ⟹ XP_063121591

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,096 (-)	NCBI

RefSeq Acc Id:

XM_063265540 ⟹ XP_063121610

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,839,687 (-)	NCBI

RefSeq Acc Id:

XM_063265545 ⟹ XP_063121615

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,803,757 (-)	NCBI

RefSeq Acc Id:

XM_063265547 ⟹ XP_063121617

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,839,687 (-)	NCBI

RefSeq Acc Id:

XM_063265551 ⟹ XP_063121621

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	21,682,336 - 21,857,073 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001387756	(Get FASTA)	NCBI Sequence Viewer
	XP_017445351	(Get FASTA)	NCBI Sequence Viewer
	XP_038954994	(Get FASTA)	NCBI Sequence Viewer
	XP_038955004	(Get FASTA)	NCBI Sequence Viewer
	XP_038955011	(Get FASTA)	NCBI Sequence Viewer
	XP_038955022	(Get FASTA)	NCBI Sequence Viewer
	XP_038955031	(Get FASTA)	NCBI Sequence Viewer
	XP_038955041	(Get FASTA)	NCBI Sequence Viewer
	XP_038955047	(Get FASTA)	NCBI Sequence Viewer
	XP_038955051	(Get FASTA)	NCBI Sequence Viewer
	XP_038955056	(Get FASTA)	NCBI Sequence Viewer
	XP_038955062	(Get FASTA)	NCBI Sequence Viewer
	XP_038955071	(Get FASTA)	NCBI Sequence Viewer
	XP_063121446	(Get FASTA)	NCBI Sequence Viewer
	XP_063121456	(Get FASTA)	NCBI Sequence Viewer
	XP_063121465	(Get FASTA)	NCBI Sequence Viewer
	XP_063121473	(Get FASTA)	NCBI Sequence Viewer
	XP_063121480	(Get FASTA)	NCBI Sequence Viewer
	XP_063121488	(Get FASTA)	NCBI Sequence Viewer
	XP_063121492	(Get FASTA)	NCBI Sequence Viewer
	XP_063121500	(Get FASTA)	NCBI Sequence Viewer
	XP_063121501	(Get FASTA)	NCBI Sequence Viewer
	XP_063121503	(Get FASTA)	NCBI Sequence Viewer
	XP_063121510	(Get FASTA)	NCBI Sequence Viewer
	XP_063121514	(Get FASTA)	NCBI Sequence Viewer
	XP_063121519	(Get FASTA)	NCBI Sequence Viewer
	XP_063121521	(Get FASTA)	NCBI Sequence Viewer
	XP_063121522	(Get FASTA)	NCBI Sequence Viewer
	XP_063121528	(Get FASTA)	NCBI Sequence Viewer
	XP_063121531	(Get FASTA)	NCBI Sequence Viewer
	XP_063121538	(Get FASTA)	NCBI Sequence Viewer
	XP_063121540	(Get FASTA)	NCBI Sequence Viewer
	XP_063121543	(Get FASTA)	NCBI Sequence Viewer
	XP_063121545	(Get FASTA)	NCBI Sequence Viewer
	XP_063121547	(Get FASTA)	NCBI Sequence Viewer
	XP_063121550	(Get FASTA)	NCBI Sequence Viewer
	XP_063121553	(Get FASTA)	NCBI Sequence Viewer
	XP_063121560	(Get FASTA)	NCBI Sequence Viewer
	XP_063121562	(Get FASTA)	NCBI Sequence Viewer
	XP_063121565	(Get FASTA)	NCBI Sequence Viewer
	XP_063121571	(Get FASTA)	NCBI Sequence Viewer
	XP_063121578	(Get FASTA)	NCBI Sequence Viewer
	XP_063121580	(Get FASTA)	NCBI Sequence Viewer
	XP_063121583	(Get FASTA)	NCBI Sequence Viewer
	XP_063121584	(Get FASTA)	NCBI Sequence Viewer
	XP_063121591	(Get FASTA)	NCBI Sequence Viewer
	XP_063121610	(Get FASTA)	NCBI Sequence Viewer
	XP_063121615	(Get FASTA)	NCBI Sequence Viewer
	XP_063121617	(Get FASTA)	NCBI Sequence Viewer
	XP_063121621	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL82921	(Get FASTA)	NCBI Sequence Viewer
	EDL82922	(Get FASTA)	NCBI Sequence Viewer
	EDL82923	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000017322.5
	ENSRNOP00000017412.5
	ENSRNOP00000017417.5
	ENSRNOP00000058049.3
	ENSRNOP00000071713.2

RefSeq Acc Id:	XP_017445351 ⟸ XM_017589862
- Peptide Label:	isoform X25
- UniProtKB:	D3ZAY7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTTEVASASEVKKGSDPSGADAHKEKAKEVVENEQTAASELDEGKASQPGPTAESQSSPHRRKR GKDPSENRGISRFIPPWLKKQKSYSLVVAKDGGDKKEPTQADGEDQILDKEDTLPEEESRAKGD AEEMAQRKHLEVKVEVREEKSALKSSAEIQPAEQVRKDKEEEVIQDIQEEKLEGGAAKRETKEV QTSELKAEVASQKAAKKTKTVLAKVTLLDGTEFSCDLEKRAKGQALFDRVCEHLNLLEKDYFGL IFQEHPEQKNWLDPAKEIKRQLRSLPWLFTFNVKFYPPDPSQLTEDITRYFLCLQLRQDISSGR LPCSFVTHALLGSYTLQAEHGDYDPEEYDSIDLGDFQFAPTHNKELEEKVAELHKTHRGLSPAQ ADSQFLENAKRLSMYGVDLHHAKDSEGVDIKLGVCANGLLIYKDRLRINRFAWPKILKISYKRS NFYIKVRPGELEQFESTIGFKLPNHRAAKRLWKVCVEHHTFYRLVSPEQPPKTKFLTLGSKFRY SGRTQAQTREASTLIDRPAPQFERASSKRVSRSLDGAPIGVVDQSLMKDFPGPPGEGSVPGPGV VSYTTVQDGRRDGKSPTKVTPLLAEGKSSHETLNVVEEKKRAEVGKGESVITEEMNGKELSPGS GPGETRKVEPMAHKDSTSLSSESSSSSSESEEDVGEYQPHHRVTEGTIREEQEYEEELEEEPGQ GAKIDGGAGGDSGVLLTAQTITSESASTTTTTHITKTVKGGISETRIEKRIVITGDAALDHDQA LAQAIREAREQHPDMSVTRVVVHKETELAEEGED hide sequence

Ensembl Acc Id:

ENSRNOP00000071713 ⟸ ENSRNOT00000079688

Ensembl Acc Id:

ENSRNOP00000058049 ⟸ ENSRNOT00000061332

Ensembl Acc Id:

ENSRNOP00000017412 ⟸ ENSRNOT00000017412

Ensembl Acc Id:

ENSRNOP00000017417 ⟸ ENSRNOT00000017417

Ensembl Acc Id:

ENSRNOP00000017322 ⟸ ENSRNOT00000017322

RefSeq Acc Id:	XP_038955071 ⟸ XM_039099143
- Peptide Label:	isoform X27
- UniProtKB:	D3ZAY2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955062 ⟸ XM_039099134
- Peptide Label:	isoform X25
- UniProtKB:	D3ZAY7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955056 ⟸ XM_039099128
- Peptide Label:	isoform X24

RefSeq Acc Id:	XP_038955051 ⟸ XM_039099123
- Peptide Label:	isoform X16

RefSeq Acc Id:	XP_038955047 ⟸ XM_039099119
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_038955041 ⟸ XM_039099113
- Peptide Label:	isoform X10
- UniProtKB:	D3ZM69 (UniProtKB/TrEMBL), A6KU04 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955031 ⟸ XM_039099103
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038954994 ⟸ XM_039099066
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038955022 ⟸ XM_039099094
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038955011 ⟸ XM_039099083
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K162 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955004 ⟸ XM_039099076
- Peptide Label:	isoform X3

RefSeq Acc Id:	NP_001387756 ⟸ NM_001400827
- UniProtKB:	D3ZDT1 (UniProtKB/TrEMBL), A6KU05 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121583 ⟸ XM_063265513
- Peptide Label:	isoform X21

RefSeq Acc Id:	XP_063121578 ⟸ XM_063265508
- Peptide Label:	isoform X20

RefSeq Acc Id:	XP_063121528 ⟸ XM_063265458
- Peptide Label:	isoform X12

RefSeq Acc Id:	XP_063121591 ⟸ XM_063265521
- Peptide Label:	isoform X23

RefSeq Acc Id:	XP_063121543 ⟸ XM_063265473
- Peptide Label:	isoform X18

RefSeq Acc Id:	XP_063121531 ⟸ XM_063265461
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_063121584 ⟸ XM_063265514
- Peptide Label:	isoform X22

RefSeq Acc Id:	XP_063121492 ⟸ XM_063265422
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063121538 ⟸ XM_063265468
- Peptide Label:	isoform X15

RefSeq Acc Id:	XP_063121540 ⟸ XM_063265470
- Peptide Label:	isoform X17

RefSeq Acc Id:	XP_063121522 ⟸ XM_063265452
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063121503 ⟸ XM_063265433
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063121501 ⟸ XM_063265431
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_063121510 ⟸ XM_063265440
- Peptide Label:	isoform X9

RefSeq Acc Id:	XP_063121547 ⟸ XM_063265477
- Peptide Label:	isoform X19
- UniProtKB:	A6KU05 (UniProtKB/TrEMBL), D3ZDT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121456 ⟸ XM_063265386
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063121500 ⟸ XM_063265430
- Peptide Label:	isoform X4
- UniProtKB:	A0A0G2K162 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121621 ⟸ XM_063265551
- Peptide Label:	isoform X27
- UniProtKB:	D3ZAY2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121514 ⟸ XM_063265444
- Peptide Label:	isoform X10
- UniProtKB:	A6KU04 (UniProtKB/TrEMBL), D3ZM69 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121562 ⟸ XM_063265492
- Peptide Label:	isoform X19
- UniProtKB:	A6KU05 (UniProtKB/TrEMBL), D3ZDT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121617 ⟸ XM_063265547
- Peptide Label:	isoform X27
- UniProtKB:	D3ZAY2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121610 ⟸ XM_063265540
- Peptide Label:	isoform X26

RefSeq Acc Id:	XP_063121560 ⟸ XM_063265490
- Peptide Label:	isoform X19
- UniProtKB:	A6KU05 (UniProtKB/TrEMBL), D3ZDT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121465 ⟸ XM_063265395
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063121446 ⟸ XM_063265376
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063121615 ⟸ XM_063265545
- Peptide Label:	isoform X27
- UniProtKB:	D3ZAY2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121550 ⟸ XM_063265480
- Peptide Label:	isoform X19
- UniProtKB:	A6KU05 (UniProtKB/TrEMBL), D3ZDT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121545 ⟸ XM_063265475
- Peptide Label:	isoform X19
- UniProtKB:	A6KU05 (UniProtKB/TrEMBL), D3ZDT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121521 ⟸ XM_063265451
- Peptide Label:	isoform X10
- UniProtKB:	A6KU04 (UniProtKB/TrEMBL), D3ZM69 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121565 ⟸ XM_063265495
- Peptide Label:	isoform X19
- UniProtKB:	A6KU05 (UniProtKB/TrEMBL), D3ZDT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121553 ⟸ XM_063265483
- Peptide Label:	isoform X19
- UniProtKB:	A6KU05 (UniProtKB/TrEMBL), D3ZDT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121473 ⟸ XM_063265403
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063121488 ⟸ XM_063265418
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063121571 ⟸ XM_063265501
- Peptide Label:	isoform X19
- UniProtKB:	A6KU05 (UniProtKB/TrEMBL), D3ZDT1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121480 ⟸ XM_063265410
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063121519 ⟸ XM_063265449
- Peptide Label:	isoform X10
- UniProtKB:	A6KU04 (UniProtKB/TrEMBL), D3ZM69 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063121580 ⟸ XM_063265510
- Peptide Label:	isoform X20

Protein Domains

FERM

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZM69-F1-model_v2	AlphaFold	D3ZM69	1-996	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1563977	AgrOrtholog
BioCyc Gene	G2FUF-62137	BioCyc
Ensembl Genes	ENSRNOG00000012346	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000017322.7	UniProtKB/TrEMBL
	ENSRNOT00000017412.7	UniProtKB/TrEMBL
	ENSRNOT00000017417.6	UniProtKB/TrEMBL
	ENSRNOT00000061332.6	UniProtKB/TrEMBL
	ENSRNOT00000079688.2	UniProtKB/TrEMBL
Gene3D-CATH	1.20.80.10	UniProtKB/TrEMBL
	2.30.29.30	UniProtKB/TrEMBL
InterPro	Band_4.1_C	UniProtKB/TrEMBL
	Band_41_domain	UniProtKB/TrEMBL
	Ez/rad/moesin	UniProtKB/TrEMBL
	FERM-adjacent	UniProtKB/TrEMBL
	FERM/acyl-CoA-bd_prot_3-hlx	UniProtKB/TrEMBL
	FERM_2	UniProtKB/TrEMBL
	FERM_central	UniProtKB/TrEMBL
	FERM_CS	UniProtKB/TrEMBL
	FERM_domain	UniProtKB/TrEMBL
	FERM_N	UniProtKB/TrEMBL
	FERM_PH-like_C	UniProtKB/TrEMBL
	PH_type	UniProtKB/TrEMBL
	SAB	UniProtKB/TrEMBL
	Ubiquitin-rel_dom	UniProtKB/TrEMBL
NCBI Gene	309557	ENTREZGENE
PANTHER	4.1 G PROTEIN	UniProtKB/TrEMBL
	PTHR23280:SF17	UniProtKB/TrEMBL
Pfam	4_1_CTD	UniProtKB/TrEMBL
	FERM_C	UniProtKB/TrEMBL
	FERM_M	UniProtKB/TrEMBL
	FERM_N	UniProtKB/TrEMBL
	PF08736	UniProtKB/TrEMBL
	SAB	UniProtKB/TrEMBL
PhenoGen	Epb41l2	PhenoGen
PIRSF	Membrane_skeletal_4_1	UniProtKB/TrEMBL
PRINTS	BAND41	UniProtKB/TrEMBL
	ERMFAMILY	UniProtKB/TrEMBL
PROSITE	FERM_1	UniProtKB/TrEMBL
	FERM_2	UniProtKB/TrEMBL
	FERM_3	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000012346	RatGTEx
SMART	B41	UniProtKB/TrEMBL
	FERM_C	UniProtKB/TrEMBL
	SM01195	UniProtKB/TrEMBL
Superfamily-SCOP	FERM_3-hlx	UniProtKB/TrEMBL
	PH domain-like	UniProtKB/TrEMBL
	SSF54236	UniProtKB/TrEMBL
UniProt	A0A0G2K162	ENTREZGENE, UniProtKB/TrEMBL
	A6KU04	ENTREZGENE, UniProtKB/TrEMBL
	A6KU05	ENTREZGENE, UniProtKB/TrEMBL
	A6KU06_RAT	UniProtKB/TrEMBL
	D3ZAY2	ENTREZGENE, UniProtKB/TrEMBL
	D3ZAY7	ENTREZGENE, UniProtKB/TrEMBL
	D3ZDT1	ENTREZGENE, UniProtKB/TrEMBL
	D3ZM69	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2013-01-14	Epb41l2	erythrocyte membrane protein band 4.1-like 2	Epb4.1l2	erythrocyte membrane protein band 4.1-like 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Epb4.1l2	erythrocyte membrane protein band 4.1-like 2	RGD1563977_predicted	similar to protein 4.1G (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1563977_predicted	similar to protein 4.1G (predicted)	LOC309557	similar to protein 4.1G	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC309557	similar to protein 4.1G			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD