Tent5d (terminal nucleotidyltransferase 5D)

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Gene: Tent5d (terminal nucleotidyltransferase 5D) Rattus norvegicus

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Symbol:

Tent5d

Name:

terminal nucleotidyltransferase 5D

RGD ID:

1559589

Description:

Predicted to enable poly(A) RNA polymerase activity. Predicted to be involved in mRNA stabilization. Orthologous to human TENT5D (terminal nucleotidyltransferase 5D); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; atrazine; bisphenol A.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Fam46d; family with sequence similarity 46, member D; hypothetical protein LOC302368; LOC302368; RGD1559589; similar to family with sequence similarity 46, member D; uncharacterized protein LOC302368

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TENT5D (terminal nucleotidyltransferase 5D)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Tent5d (terminal nucleotidyltransferase 5D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tent5d (terminal nucleotidyltransferase 5D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TENT5D (terminal nucleotidyltransferase 5D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TENT5D (terminal nucleotidyltransferase 5D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tent5d (terminal nucleotidyltransferase 5D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TENT5D (terminal nucleotidyltransferase 5D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TENT5D (terminal nucleotidyltransferase 5D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tent5d (terminal nucleotidyltransferase 5D)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	TENT5D (terminal nucleotidyltransferase 5D)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Tent5d (terminal nucleotidyltransferase 5D)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	pqn-44	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG46385	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	76,974,069 - 77,042,306 (+)	NCBI		GRCr8
mRatBN7.2	X	72,901,287 - 72,974,562 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	72,901,241 - 72,970,573 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	74,456,975 - 74,458,468 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	77,977,000 - 77,978,493 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	75,543,916 - 75,545,409 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	78,911,641 - 78,994,467 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	78,991,223 - 78,992,735 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	79,166,276 - 79,180,914 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	96,118,535 - 96,120,028 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	74,247,438 - 74,248,931 (+)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

autosomal hemophilia A (ISO)

factor VIII deficiency (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (EXP)

2-palmitoylglycerol (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

atrazine (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP)

cadmium dichloride (ISO)

Ethylenethiourea (EXP)

gentamycin (EXP)

mono(2-ethylhexyl) phthalate (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA stabilization (IBA)

Molecular Function

poly(A) RNA polymerase activity (IBA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:28931820

Genomics

Comparative Map Data

Tent5d
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	76,974,069 - 77,042,306 (+)	NCBI		GRCr8
mRatBN7.2	X	72,901,287 - 72,974,562 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	72,901,241 - 72,970,573 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	74,456,975 - 74,458,468 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	77,977,000 - 77,978,493 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	75,543,916 - 75,545,409 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	78,911,641 - 78,994,467 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	78,991,223 - 78,992,735 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	79,166,276 - 79,180,914 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	96,118,535 - 96,120,028 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	74,247,438 - 74,248,931 (+)	NCBI		Celera
Cytogenetic Map	X	q22	NCBI

TENT5D
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	80,335,504 - 80,445,309 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	80,335,504 - 80,445,311 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	79,591,003 - 79,700,808 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	79,562,621 - 79,587,466 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	79,482,109 - 79,506,955	NCBI
Celera	X	79,831,129 - 79,940,938 (+)	NCBI		Celera
Cytogenetic Map	X	q21.1	NCBI
HuRef	X	73,172,395 - 73,281,895 (+)	NCBI		HuRef
CHM1_1	X	79,484,511 - 79,594,231 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	78,768,214 - 78,878,855 (+)	NCBI		T2T-CHM13v2.0

Tent5d
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	106,836,196 - 106,916,517 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	106,836,196 - 106,916,515 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	107,792,590 - 107,872,911 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	107,792,590 - 107,872,909 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	105,011,911 - 105,068,248 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
Celera	X	94,653,373 - 94,709,739 (+)	NCBI		Celera
Cytogenetic Map	X	D	NCBI
cM Map	X	47.62	NCBI

Tent5d
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955529	720,659 - 784,609 (+)	NCBI	ChiLan1.0	ChiLan1.0

TENT5D
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	79,785,400 - 79,896,981 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	79,789,011 - 79,900,592 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	69,387,182 - 69,495,639 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	79,494,755 - 79,602,814 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

TENT5D
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	61,832,733 - 61,855,517 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	61,852,894 - 61,854,066 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	52,572,841 - 52,580,077 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	63,083,528 - 63,090,691 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	63,084,975 - 63,086,147 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	60,769,158 - 60,791,941 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	62,388,032 - 62,410,857 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	61,985,015 - 62,007,780 (+)	NCBI		UU_Cfam_GSD_1.0

Tent5d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	55,518,076 - 55,588,213 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936547	1,905,266 - 1,906,438 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936547	1,905,253 - 1,906,568 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TENT5D
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	64,120,248 - 64,121,420 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	64,120,229 - 64,122,912 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	73,812,642 - 73,815,454 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TENT5D
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	69,323,260 - 69,414,882 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	69,412,113 - 69,413,282 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666067	11,854,194 - 11,860,879 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tent5d
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624836	711,234 - 712,406 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624836	711,182 - 723,998 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Tent5d
270 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	43
Count of miRNA genes:	42
Interacting mature miRNAs:	42
Transcripts:	ENSRNOT00000031200
Prediction methods:	Miranda, Pita
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61430	Cia18	Collagen induced arthritis QTL 18	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	14843113	120568734	Rat
61431	Cia19	Collagen induced arthritis QTL 19	4.4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	65612192	120568734	Rat
738035	Stresp1	Stress response QTL 1	4.96	0.000011	stress-related behavior trait (VT:0010451)	defensive burying - coping	X	41304447	112935181	Rat
1598837	Memor13	Memory QTL 13	3.2		exploratory behavior trait (VT:0010471)	difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	X	41052407	146860749	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
6	30	42	33	29	14	9	14	5	77	51	30	6	55	15

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001106936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001433958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006257181	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008773338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601960	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601961	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601964	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	CH473969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000031200 ⟹ ENSRNOP00000035000

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	72,954,111 - 72,970,573 (+)	Ensembl
Rnor_6.0 Ensembl	X	78,991,223 - 78,992,735 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000096507 ⟹ ENSRNOP00000082477

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	72,901,241 - 72,970,573 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108845 ⟹ ENSRNOP00000089113

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	72,954,111 - 72,970,573 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000109528 ⟹ ENSRNOP00000093247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	72,905,107 - 72,970,573 (+)	Ensembl

RefSeq Acc Id:

NM_001106936 ⟹ NP_001100406

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	77,039,705 - 77,041,198 (+)	NCBI
mRatBN7.2	X	72,966,930 - 72,968,423 (+)	NCBI
Rnor_6.0	X	78,991,362 - 78,992,855 (+)	NCBI
Rnor_5.0	X	79,166,276 - 79,180,914 (+)	NCBI
RGSC_v3.4	X	96,118,535 - 96,120,028 (+)	RGD
Celera	X	74,247,438 - 74,248,931 (+)	RGD

Sequence:

show sequence

TTCACAATGTCGGAGATCAGATTCAGCAATCTCACTTGGGATCACATTGTAACACTGGACCGTG
TGTTAGATGAAGTAATCCCAATTCATGGAAGGGGCAATTTCCCCACGCTGGAGGTAAAACCAAA
AGATATTGTTCATGTTGTAAAAGATCAACTCATAAAGCAGGGCATTATTGTTAAAGATACAAGA
TTGAATGGCTCTACAGCAAGTTACATACTCGCAAGCCATAATGGAATCAGCTATAAAGATTTGG
ACATTATTTTTGGTGTTGATCTTCCAAGCGATCAAGAATTTCAGGTAGTTAAGGATGCAGTTTT
AGGCTGTCTACTTGACTTTTTACCAAAAGGTGTTAAGAAAGAAAAGATTACCCTAAAAACCATG
AAAGAAGCATATGTGCAGAAAATGGTAAAAATTTGCAGTAACAACGATCGTTGGAGTCTCATCT
CCCTTTCAAATAACACTGGGAAGAATGTAGAACTAAAATTTGTGAACTCACTCAGACGACAATT
TGAATTTAGTGTAGATTCTTTCCAAATTCTTTTGGATTCCATGTTAGATTTTTATAGTGTCCCA
AATGCCAAGCTCACCAAAGAATCCTGTCCTGTTGTGGTGGCTGAAAGTATGTATGGCGACTTCC
AAGAAGCAATGGTCCATTTGAAATACAAGCTAATATCTACCCGAAAGCCTGAAGAGATCAGAGG
TGGTGGCCTTTTGAAGTATAGCAATTTGTTGGTTCGTGACTTCAAGCCAGCCTGCCAAACAGAA
ATTAAGACTCTGGAACGTTATATGTGTTCTAGATTTTTCATTGACTTTCCTGATGTAGCAGAAC
AGCAAAAGAAAATTGAATCGTACCTCCGCAACCATTTCATAGGTGAAGAAAAGAGCAAGTATGA
GTACCTTATGACCTTGCATGGAGTTGTGAACCAAAGCACTGTCTGCCTCATGGGATATGAAAGA
AGGCAGACCCTTAACATGATCACCCTTTTGGCTTTGAAAGTACTTGGAGAACAGAATATTTTAC
CTAGTACAGACAACGTAACTTGCTTTTATCAACCTGCTCCATATCTAGTTCTTGAGGGAGGATA
CCCTAGTTATTATGTAGCATCTGGGCCACCACTGGTTTATTTCCAGCCATGTCATACAGTGCAG
TTCCCTGTGCAAAATGGTATGATGTAAGAAATGCACGTACCAGGAGTTTTGCTTAAGCACCAAT
GAAAGGCAGTTTTCCAAGTTCTGTAAAAAGTTAAGATCTATTTTTGTGTAGTTGCCAACTATTT
TTCAACAGTTGAAGCGTCAAAAATCATAGTAGATAAGGTATCATCTCTAAACTGACATTTGAAC
GTGATCATTGAATGTTGTAACTGTAAAATATTTCAAATGTAGTAGAATACTTGAAATGATTCTT
CAAGTCTTACTGACGCAGATTTACTGTGACCAGGATAAGATGAGTACCTATTTGGCTAACATCT
GAAAGAACACTTCTAATGTTTT

hide sequence

RefSeq Acc Id:

XM_006257181 ⟹ XP_006257243

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	77,025,703 - 77,041,795 (+)	NCBI
mRatBN7.2	X	72,953,381 - 72,974,561 (+)	NCBI
Rnor_6.0	X	78,978,489 - 78,994,467 (+)	NCBI
Rnor_5.0	X	79,166,276 - 79,180,914 (+)	NCBI

Sequence:

show sequence

TCTGGCAACCTGTGAATATCTGTATGATTTATTCACCCATATTATTTTTAATTCTAAGAAAAAA
CAAGGCCTACCGGCATAACAGTAAGGTGGAGACTTGGTGAGAGGAGAGTTGCTGAGAGAGGAAG
GGAGTAAGAATGGGTGTATGAAGTTATTAAAAACATAAAGTTTAAATAATATTTACTATAGCCT
ACTACATGTCTCACTTTAAACCATGGTCCTAGATATGAGCATTATTGATGCAATAGTATATCCT
TTATCTCCTAGCAACAGTAGCCATAGTGTTGTGAAAAGTAAGGTACAGAAACTGTGGGGATATA
AGTCAATGGGGAACTCTATAGAGAAGGAAGTTAGTTTTAGTTCTGTAGGTTGTTAAGTCCAAAT
TCAACAAAGTATGTTGTCAAAACTGTGGTGGTTACCAATCTTGAAGTTTTCTAAAGTAGGAGAC
ACCTACCTCTCTCTATAAGCATTTACTACTGGTTGCCTCATGACTTTACTCCATGATAAGATGA
AAATTCATATGTTGTCCGAAACATTCACAGAAGCATCATATTGAATATAGAGAGTTCTCAAACG
TTATCTTTACAGTTTGTTCTATTGACTTCACAATGTCGGAGATCAGATTCAGCAATCTCACTTG
GGATCACATTGTAACACTGGACCGTGTGTTAGATGAAGTAATCCCAATTCATGGAAGGGGCAAT
TTCCCCACGCTGGAGGTAAAACCAAAAGATATTGTTCATGTTGTAAAAGATCAACTCATAAAGC
AGGGCATTATTGTTAAAGATACAAGATTGAATGGCTCTACAGCAAGTTACATACTCGCAAGCCA
TAATGGAATCAGCTATAAAGATTTGGACATTATTTTTGGTGTTGATCTTCCAAGCGATCAAGAA
TTTCAGGTAGTTAAGGATGCAGTTTTAGGCTGTCTACTTGACTTTTTACCAAAAGGTGTTAAGA
AAGAAAAGATTACCCTAAAAACCATGAAAGAAGCATATGTGCAGAAAATGGTAAAAATTTGCAG
TAACAACGATCGTTGGAGTCTCATCTCCCTTTCAAATAACACTGGGAAGAATGTAGAACTAAAA
TTTGTGAACTCACTCAGACGACAATTTGAATTTAGTGTAGATTCTTTCCAAATTCTTTTGGATT
CCATGTTAGATTTTTATAGTGTCCCAAATGCCAAGCTCACCAAAGAATCCTGTCCTGTTGTGGT
GGCTGAAAGTATGTATGGCGACTTCCAAGAAGCAATGGTCCATTTGAAATACAAGCTAATATCT
ACCCGAAAGCCTGAAGAGATCAGAGGTGGTGGCCTTTTGAAGTATAGCAATTTGTTGGTTCGTG
ACTTCAAGCCAGCCTGCCAAACAGAAATTAAGACTCTGGAACGTTATATGTGTTCTAGATTTTT
CATTGACTTTCCTGATGTAGCAGAACAGCAAAAGAAAATTGAATCGTACCTCCGCAACCATTTC
ATAGGTGAAGAAAAGAGCAAGTATGAGTACCTTATGACCTTGCATGGAGTTGTGAACCAAAGCA
CTGTCTGCCTCATGGGATATGAAAGAAGGCAGACCCTTAACATGATCACCCTTTTGGCTTTGAA
AGTACTTGGAGAACAGAATATTTTACCTAGTACAGACAACGTAACTTGCTTTTATCAACCTGCT
CCATATCTAGTTCTTGAGGGAGGATACCCTAGTTATTATGTAGCATCTGGGCCACCACTGGTTT
ATTTCCAGCCATGTCATACAGTGCAGTTCCCTGTGCAAAATGGTATGATGTAAGAAATGCACGT
ACCAGGAGTTTTGCTTAAGCACCAATGAAAGGCAGTTTTCCAAGTTCTGTAAAAAGTTAAGATC
TATTTTTGTGTAGTTGCCAACTATTTTTCAACAGTTGAAGCGTCAAAAATCATAGTAGATAAGG
TATCATCTCTAAACTGACATTTGAACGTGATCATTGAATGTTGTAACTGTAAAATATTTCAAAT
GTAGTAGAATACTTGAAATGATTCTTCAAGTCTTACTGACGCAGATTTACTGTGACCAGGATAA
GATGAGTACCTATTTGGCTAACATCTGAAAGAACACTTCTAATGTTTTCAAAAGAAGTGTAGTG
AAGATATATTAACAACATTTTTATGTACAATTAGTTCCTTGTTATACTGTTTTTTCCTTAGCAA
ATAATAACAGGAAATTTTTGTTCATAAATTGAAAGTATCTGATTTCAAAGATAATTTTAAATGA
TGTTAAAACAATGGATTGTAAGCCCGTGTTTCCCAGTACAACTTATTGGCTTGAAAACACTACT
AAAATTTAAAGAACCACTTGGAAAAGTATTCTGGAAAACAGGAATGTTTCCCTTATCTTGTAAG
AATTCAGCTAATCTGTGGATCAAAAAGTACCTTTCAGAACAACCAAGAACATAACTTACTATGC
AGGGATTTTTGGAATGTAATTAAGTTGAAATGAAGAAAAAGACCAATTCTGAACATGAAACTAT
TCTATCATCATCTCTTAAGATAAAACTAAATAGAAGACAAAAAGAAAAATACCACCACCAATGA
CAAAAAATTAGAGATTTAGCCATGACGTTTAAGATCTCTTTTACCTATTTCGTCAGGATCCTAA
TACATCTGGAAATGTTCATCATTAGATATTGAAAGCACTTCTCACTAAATGAAAGATTTTTCCA
ACACCAAAGATTTGTTTCTAGTATCTTCTTCAATGTTAGATTTTAGTTAATACTACACTTTTCC
AGTATTGCATATATTCGCCATTATTCTGAATATCTTCTCATTACATCAGATATCCACTAGCAAA
TCTATGTTTTGTGGTTTAAAATGAATTTTCATACATGTTTAAAAGAGCTGTTATATGGGATGAT
ATATAACAAACTATTCTGAATGAATGTCAATCAGGCCATCGAAAAATTTAAGTATTTTCCTATC
ACACAAGAACCAGCAAAATCTTGAAATGTGCTACCTATAGACTCTATGTAAAGTCATTTTTCAG
TATTGTAGTATTGAATAGAATAGTACGATTTCTATGGAATTTTTCAAGTAGCCAGTATTTCTGA
TGTTTTCTACACATACATCACTGGGCATTGGTGTGTTTAAATAATTATATGTGTAATACAAAAT
CCCAAGACTTTAAAATATTTGGATTTACCTTTTCAAGTGGAGTTAAAATAAAAATTATTAAATA
ATAAATTAAGAAAATGTATCACTGTATCTATCTACATCTTATATTAGCTAAAACATAATGATCA
TTCTTTGTGTCTCTAACATAAAAATTTTACTTTTTAGAAAGTGGAAATGCATATACATAAAACT
GAAGTTACTCATCAGTAACAAAAAATAATTCTAAAAGAGACAGGGGGTTATTTGAGAATAAGAG
GATTAAGTTAGTGGTATGGTTGCTAAAGGTTCAGTATTTCCCAAGGTTCTTCAATAATAGAAAT
GTGAAGGTGTCTGGGAGCGTCTTATCATATCTGCCATCCCATTGCTTCTTACTGGTATTTGCTC
CGATCTCTTTATTTCCTAAGAAGCTATTTTTTCATGTCATTTTCCTAAAGCTTTAAGTTGTAAT
GGAGGGAAAATAACCCAAAAGGTACATGTTTTCTTCTAACATTTTAAGTGTCTTGATTTCTTTG
GAAAAAGTTCAACATACACATATACATATATGTATATATTTTCTCAGGTTAGAGAATGCA

hide sequence

RefSeq Acc Id:

XM_008773335 ⟹ XP_008771557

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	76,974,069 - 77,041,795 (+)	NCBI
mRatBN7.2	X	72,901,287 - 72,974,561 (+)	NCBI
Rnor_6.0	X	78,911,681 - 78,994,467 (+)	NCBI

Sequence:

show sequence

TATGGTTAGGAAGGCTCTGGTCGCTTGGGGGCGGTGGAGTCCGAGAACTGAAGCTTAGGTCCCT
CCCCCTCAGATGCTTCACGTGCGCTCAGGATAACTGCGCTCAACCTGGTCCGGCATCCCACCAG
ACTTCTAGTTCTTTCTTTTGTCAACCCGGACGCCGCTTAGCCTTCCGCCCCACCTCGTCCCTCA
GATTTCACACTGTCCTGGGCGTCCCTCATCCCTTTCTCTCAGAGCTTAAGTCTTAAAGGATGAA
GACAAAGGCACTGTTTGAAGAAAATTGTTAAGTGGAGAAGTAAAAAGAGATTTTTTTTGAGAAG
TGTGGACGAAGACAAAGTGGTTACCAATCTTGAAGTTTTCTAAAGTAGGAGACACCTACCTCTC
TCTATAAGCATTTACTACTGGTTGCCTCATGACTTTACTCCATGATAAGATGAAAATTCATATG
TTGTCCGAAACATTCACAGAAGCATCATATTGAATATAGAGAGTTCTCAAACGTTATCTTTACA
GTTTGTTCTATTGACTTCACAATGTCGGAGATCAGATTCAGCAATCTCACTTGGGATCACATTG
TAACACTGGACCGTGTGTTAGATGAAGTAATCCCAATTCATGGAAGGGGCAATTTCCCCACGCT
GGAGGTAAAACCAAAAGATATTGTTCATGTTGTAAAAGATCAACTCATAAAGCAGGGCATTATT
GTTAAAGATACAAGATTGAATGGCTCTACAGCAAGTTACATACTCGCAAGCCATAATGGAATCA
GCTATAAAGATTTGGACATTATTTTTGGTGTTGATCTTCCAAGCGATCAAGAATTTCAGGTAGT
TAAGGATGCAGTTTTAGGCTGTCTACTTGACTTTTTACCAAAAGGTGTTAAGAAAGAAAAGATT
ACCCTAAAAACCATGAAAGAAGCATATGTGCAGAAAATGGTAAAAATTTGCAGTAACAACGATC
GTTGGAGTCTCATCTCCCTTTCAAATAACACTGGGAAGAATGTAGAACTAAAATTTGTGAACTC
ACTCAGACGACAATTTGAATTTAGTGTAGATTCTTTCCAAATTCTTTTGGATTCCATGTTAGAT
TTTTATAGTGTCCCAAATGCCAAGCTCACCAAAGAATCCTGTCCTGTTGTGGTGGCTGAAAGTA
TGTATGGCGACTTCCAAGAAGCAATGGTCCATTTGAAATACAAGCTAATATCTACCCGAAAGCC
TGAAGAGATCAGAGGTGGTGGCCTTTTGAAGTATAGCAATTTGTTGGTTCGTGACTTCAAGCCA
GCCTGCCAAACAGAAATTAAGACTCTGGAACGTTATATGTGTTCTAGATTTTTCATTGACTTTC
CTGATGTAGCAGAACAGCAAAAGAAAATTGAATCGTACCTCCGCAACCATTTCATAGGTGAAGA
AAAGAGCAAGTATGAGTACCTTATGACCTTGCATGGAGTTGTGAACCAAAGCACTGTCTGCCTC
ATGGGATATGAAAGAAGGCAGACCCTTAACATGATCACCCTTTTGGCTTTGAAAGTACTTGGAG
AACAGAATATTTTACCTAGTACAGACAACGTAACTTGCTTTTATCAACCTGCTCCATATCTAGT
TCTTGAGGGAGGATACCCTAGTTATTATGTAGCATCTGGGCCACCACTGGTTTATTTCCAGCCA
TGTCATACAGTGCAGTTCCCTGTGCAAAATGGTATGATGTAAGAAATGCACGTACCAGGAGTTT
TGCTTAAGCACCAATGAAAGGCAGTTTTCCAAGTTCTGTAAAAAGTTAAGATCTATTTTTGTGT
AGTTGCCAACTATTTTTCAACAGTTGAAGCGTCAAAAATCATAGTAGATAAGGTATCATCTCTA
AACTGACATTTGAACGTGATCATTGAATGTTGTAACTGTAAAATATTTCAAATGTAGTAGAATA
CTTGAAATGATTCTTCAAGTCTTACTGACGCAGATTTACTGTGACCAGGATAAGATGAGTACCT
ATTTGGCTAACATCTGAAAGAACACTTCTAATGTTTTCAAAAGAAGTGTAGTGAAGATATATTA
ACAACATTTTTATGTACAATTAGTTCCTTGTTATACTGTTTTTTCCTTAGCAAATAATAACAGG
AAATTTTTGTTCATAAATTGAAAGTATCTGATTTCAAAGATAATTTTAAATGATGTTAAAACAA
TGGATTGTAAGCCCGTGTTTCCCAGTACAACTTATTGGCTTGAAAACACTACTAAAATTTAAAG
AACCACTTGGAAAAGTATTCTGGAAAACAGGAATGTTTCCCTTATCTTGTAAGAATTCAGCTAA
TCTGTGGATCAAAAAGTACCTTTCAGAACAACCAAGAACATAACTTACTATGCAGGGATTTTTG
GAATGTAATTAAGTTGAAATGAAGAAAAAGACCAATTCTGAACATGAAACTATTCTATCATCAT
CTCTTAAGATAAAACTAAATAGAAGACAAAAAGAAAAATACCACCACCAATGACAAAAAATTAG
AGATTTAGCCATGACGTTTAAGATCTCTTTTACCTATTTCGTCAGGATCCTAATACATCTGGAA
ATGTTCATCATTAGATATTGAAAGCACTTCTCACTAAATGAAAGATTTTTCCAACACCAAAGAT
TTGTTTCTAGTATCTTCTTCAATGTTAGATTTTAGTTAATACTACACTTTTCCAGTATTGCATA
TATTCGCCATTATTCTGAATATCTTCTCATTACATCAGATATCCACTAGCAAATCTATGTTTTG
TGGTTTAAAATGAATTTTCATACATGTTTAAAAGAGCTGTTATATGGGATGATATATAACAAAC
TATTCTGAATGAATGTCAATCAGGCCATCGAAAAATTTAAGTATTTTCCTATCACACAAGAACC
AGCAAAATCTTGAAATGTGCTACCTATAGACTCTATGTAAAGTCATTTTTCAGTATTGTAGTAT
TGAATAGAATAGTACGATTTCTATGGAATTTTTCAAGTAGCCAGTATTTCTGATGTTTTCTACA
CATACATCACTGGGCATTGGTGTGTTTAAATAATTATATGTGTAATACAAAATCCCAAGACTTT
AAAATATTTGGATTTACCTTTTCAAGTGGAGTTAAAATAAAAATTATTAAATAATAAATTAAGA
AAATGTATCACTGTATCTATCTACATCTTATATTAGCTAAAACATAATGATCATTCTTTGTGTC
TCTAACATAAAAATTTTACTTTTTAGAAAGTGGAAATGCATATACATAAAACTGAAGTTACTCA
TCAGTAACAAAAAATAATTCTAAAAGAGACAGGGGGTTATTTGAGAATAAGAGGATTAAGTTAG
TGGTATGGTTGCTAAAGGTTCAGTATTTCCCAAGGTTCTTCAATAATAGAAATGTGAAGGTGTC
TGGGAGCGTCTTATCATATCTGCCATCCCATTGCTTCTTACTGGTATTTGCTCCGATCTCTTTA
TTTCCTAAGAAGCTATTTTTTCATGTCATTTTCCTAAAGCTTTAAGTTGTAATGGAGGGAAAAT
AACCCAAAAGGTACATGTTTTCTTCTAACATTTTAAGTGTCTTGATTTCTTTGGAAAAAGTTCA
ACATACACATATACATATATGTATATATTTTCTCAGGTTAGAGAATGCA

hide sequence

RefSeq Acc Id:

XM_008773338 ⟹ XP_008771560

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	76,974,069 - 77,042,306 (+)	NCBI
mRatBN7.2	X	72,901,287 - 72,974,562 (+)	NCBI
Rnor_6.0	X	78,911,681 - 78,994,467 (+)	NCBI

Sequence:

show sequence

TATGGTTAGGAAGGCTCTGGTCGCTTGGGGGCGGTGGAGTCCGAGAACTGAAGCTTAGGTCCCT
CCCCCTCAGATGCTTCACGTGCGCTCAGGATAACTGCGCTCAACCTGGTCCGGCATCCCACCAG
ACTTCTAGTTCTTTCTTTTGTCAACCCGGACGCCGCTTAGCCTTCCGCCCCACCTCGTCCCTCA
GATTTCACACTGTCCTGGGCGTCCCTCATCCCTTTCTCTCAGAGCTTAAGTCTTAAAGGATGAA
GACAAAGGCACTGTTTGAAGAAAATTGTTAAGTGGAGAAGTAAAAAGAGATTTTTTTTGAGAAG
TGTGGACGAAGACAAAGTGGTTACCAATCTTGAAGTTTTCTAAAGTAGGAGACACCTACCTCTC
TCTATAAGCATTTACTTTGTTCTATTGACTTCACAATGTCGGAGATCAGATTCAGCAATCTCAC
TTGGGATCACATTGTAACACTGGACCGTGTGTTAGATGAAGTAATCCCAATTCATGGAAGGGGC
AATTTCCCCACGCTGGAGGTAAAACCAAAAGATATTGTTCATGTTGTAAAAGATCAACTCATAA
AGCAGGGCATTATTGTTAAAGATACAAGATTGAATGGCTCTACAGCAAGTTACATACTCGCAAG
CCATAATGGAATCAGCTATAAAGATTTGGACATTATTTTTGGTGTTGATCTTCCAAGCGATCAA
GAATTTCAGGTAGTTAAGGATGCAGTTTTAGGCTGTCTACTTGACTTTTTACCAAAAGGTGTTA
AGAAAGAAAAGATTACCCTAAAAACCATGAAAGAAGCATATGTGCAGAAAATGGTAAAAATTTG
CAGTAACAACGATCGTTGGAGTCTCATCTCCCTTTCAAATAACACTGGGAAGAATGTAGAACTA
AAATTTGTGAACTCACTCAGACGACAATTTGAATTTAGTGTAGATTCTTTCCAAATTCTTTTGG
ATTCCATGTTAGATTTTTATAGTGTCCCAAATGCCAAGCTCACCAAAGAATCCTGTCCTGTTGT
GGTGGCTGAAAGTATGTATGGCGACTTCCAAGAAGCAATGGTCCATTTGAAATACAAGCTAATA
TCTACCCGAAAGCCTGAAGAGATCAGAGGTGGTGGCCTTTTGAAGTATAGCAATTTGTTGGTTC
GTGACTTCAAGCCAGCCTGCCAAACAGAAATTAAGACTCTGGAACGTTATATGTGTTCTAGATT
TTTCATTGACTTTCCTGATGTAGCAGAACAGCAAAAGAAAATTGAATCGTACCTCCGCAACCAT
TTCATAGGTGAAGAAAAGAGCAAGTATGAGTACCTTATGACCTTGCATGGAGTTGTGAACCAAA
GCACTGTCTGCCTCATGGGATATGAAAGAAGGCAGACCCTTAACATGATCACCCTTTTGGCTTT
GAAAGTACTTGGAGAACAGAATATTTTACCTAGTACAGACAACGTAACTTGCTTTTATCAACCT
GCTCCATATCTAGTTCTTGAGGGAGGATACCCTAGTTATTATGTAGCATCTGGGCCACCACTGG
TTTATTTCCAGCCATGTCATACAGTGCAGTTCCCTGTGCAAAATGGTATGATGTAAGAAATGCA
CGTACCAGGAGTTTTGCTTAAGCACCAATGAAAGGCAGTTTTCCAAGTTCTGTAAAAAGTTAAG
ATCTATTTTTGTGTAGTTGCCAACTATTTTTCAACAGTTGAAGCGTCAAAAATCATAGTAGATA
AGGTATCATCTCTAAACTGACATTTGAACGTGATCATTGAATGTTGTAACTGTAAAATATTTCA
AATGTAGTAGAATACTTGAAATGATTCTTCAAGTCTTACTGACGCAGATTTACTGTGACCAGGA
TAAGATGAGTACCTATTTGGCTAACATCTGAAAGAACACTTCTAATGTTTTCAAAAGAAGTGTA
GTGAAGATATATTAACAACATTTTTATGTACAATTAGTTCCTTGTTATACTGTTTTTTCCTTAG
CAAATAATAACAGGAAATTTTTGTTCATAAATTGAAAGTATCTGATTTCAAAGATAATTTTAAA
TGATGTTAAAACAATGGATTGTAAGCCCGTGTTTCCCAGTACAACTTATTGGCTTGAAAACACT
ACTAAAATTTAAAGAACCACTTGGAAAAGTATTCTGGAAAACAGGAATGTTTCCCTTATCTTGT
AAGAATTCAGCTAATCTGTGGATCAAAAAGTACCTTTCAGAACAACCAAGAACATAACTTACTA
TGCAGGGATTTTTGGAATGTAATTAAGTTGAAATGAAGAAAAAGACCAATTCTGAACATGAAAC
TATTCTATCATCATCTCTTAAGATAAAACTAAATAGAAGACAAAAAGAAAAATACCACCACCAA
TGACAAAAAATTAGAGATTTAGCCATGACGTTTAAGATCTCTTTTACCTATTTCGTCAGGATCC
TAATACATCTGGAAATGTTCATCATTAGATATTGAAAGCACTTCTCACTAAATGAAAGATTTTT
CCAACACCAAAGATTTGTTTCTAGTATCTTCTTCAATGTTAGATTTTAGTTAATACTACACTTT
TCCAGTATTGCATATATTCGCCATTATTCTGAATATCTTCTCATTACATCAGATATCCACTAGC
AAATCTATGTTTTGTGGTTTAAAATGAATTTTCATACATGTTTAAAAGAGCTGTTATATGGGAT
GATATATAACAAACTATTCTGAATGAATGTCAATCAGGCCATCGAAAAATTTAAGTATTTTCCT
ATCACACAAGAACCAGCAAAATCTTGAAATGTGCTACCTATAGACTCTATGTAAAGTCATTTTT
CAGTATTGTAGTATTGAATAGAATAGTACGATTTCTATGGAATTTTTCAAGTAGCCAGTATTTC
TGATGTTTTCTACACATACATCACTGGGCATTGGTGTGTTTAAATAATTATATGTGTAATACAA
AATCCCAAGACTTTAAAATATTTGGATTTACCTTTTCAAGTGGAGTTAAAATAAAAATTATTAA
ATAATAAATTAAGAAAATGTATCACTGTATCTATCTACATCTTATATTAGCTAAAACATAATGA
TCATTCTTTGTGTCTCTAACATAAAAATTTTACTTTTTAGAAAGTGGAAATGCATATACATAAA
ACTGAAGTTACTCATCAGTAACAAAAAATAATTCTAAAAGAGACAGGGGGTTATTTGAGAATAA
GAGGATTAAGTTAGTGGTATGGTTGCTAAAGGTTCAGTATTTCCCAAGGTTCTTCAATAATAGA
AATGTGAAGGTGTCTGGGAGCGTCTTATCATATCTGCCATCCCATTGCTTCTTACTGGTATTTG
CTCCGATCTCTTTATTTCCTAAGAAGCTATTTTTTCATGTCATTTTCCTAAAGCTTTAAGTTGT
AATGGAGGGAAAATAACCCAAAAGGTACATGTTTTCTTCTAACATTTTAAGTGTCTTGATTTCT
TTGGAAAAAGTTCAACATACACATATACATATATGTATATATTTTCTCAGGTTAGAGAATGCA

hide sequence

RefSeq Acc Id:

XM_017601960 ⟹ XP_017457449

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	77,025,703 - 77,041,795 (+)	NCBI
mRatBN7.2	X	72,953,381 - 72,974,561 (+)	NCBI
Rnor_6.0	X	78,978,489 - 78,994,467 (+)	NCBI

Sequence:

show sequence

TCTGGCAACCTGTGAATATCTGTATGATTTATTCACCCATATTATTTTTAATTCTAAGAAAAAA
CAAGGCCTACCGGCATAACAGTAAGGTGGAGACTTGGTGAGAGGAGAGTTGCTGAGAGAGGAAG
GGAGTAAGAATGGGTGTATGAAGTTATTAAAAACATAAAGTTTAAATAATATTTACTATAGCCT
ACTACATGTCTCACTTTAAACCATGGTCCTAGATATGAGCATTATTGATGCAATAGTATATCCT
TTATCTCCTAGCAACAGTAGCCATAGTGTTGTGAAAAGTAAGGTACAGAAACTGTGGGGATATA
AGTCAATGGGGAACTCTATAGAGAAGGAAGTTAGTTTTAGTTCTGTAGGTTGTTAAGTCCAAAT
TCAACAAAGTATGTTGTCAAAACTGTGTGTTAAGAATGAAAACAAAGTCAAATCTGAGGATGAA
TCGATCTTGGGGAGAGCTGAGGTGGTTACCAATCTTGAAGTTTTCTAAAGTAGGAGACACCTAC
CTCTCTCTATAAGCATTTACTACTGGTTGCCTCATGACTTTACTCCATGATAAGATGAAAATTC
ATATGTTGTCCGAAACATTCACAGAAGCATCATATTGAATATAGAGAGTTCTCAAACGTTATCT
TTACAGTTTGTTCTATTGACTTCACAATGTCGGAGATCAGATTCAGCAATCTCACTTGGGATCA
CATTGTAACACTGGACCGTGTGTTAGATGAAGTAATCCCAATTCATGGAAGGGGCAATTTCCCC
ACGCTGGAGGTAAAACCAAAAGATATTGTTCATGTTGTAAAAGATCAACTCATAAAGCAGGGCA
TTATTGTTAAAGATACAAGATTGAATGGCTCTACAGCAAGTTACATACTCGCAAGCCATAATGG
AATCAGCTATAAAGATTTGGACATTATTTTTGGTGTTGATCTTCCAAGCGATCAAGAATTTCAG
GTAGTTAAGGATGCAGTTTTAGGCTGTCTACTTGACTTTTTACCAAAAGGTGTTAAGAAAGAAA
AGATTACCCTAAAAACCATGAAAGAAGCATATGTGCAGAAAATGGTAAAAATTTGCAGTAACAA
CGATCGTTGGAGTCTCATCTCCCTTTCAAATAACACTGGGAAGAATGTAGAACTAAAATTTGTG
AACTCACTCAGACGACAATTTGAATTTAGTGTAGATTCTTTCCAAATTCTTTTGGATTCCATGT
TAGATTTTTATAGTGTCCCAAATGCCAAGCTCACCAAAGAATCCTGTCCTGTTGTGGTGGCTGA
AAGTATGTATGGCGACTTCCAAGAAGCAATGGTCCATTTGAAATACAAGCTAATATCTACCCGA
AAGCCTGAAGAGATCAGAGGTGGTGGCCTTTTGAAGTATAGCAATTTGTTGGTTCGTGACTTCA
AGCCAGCCTGCCAAACAGAAATTAAGACTCTGGAACGTTATATGTGTTCTAGATTTTTCATTGA
CTTTCCTGATGTAGCAGAACAGCAAAAGAAAATTGAATCGTACCTCCGCAACCATTTCATAGGT
GAAGAAAAGAGCAAGTATGAGTACCTTATGACCTTGCATGGAGTTGTGAACCAAAGCACTGTCT
GCCTCATGGGATATGAAAGAAGGCAGACCCTTAACATGATCACCCTTTTGGCTTTGAAAGTACT
TGGAGAACAGAATATTTTACCTAGTACAGACAACGTAACTTGCTTTTATCAACCTGCTCCATAT
CTAGTTCTTGAGGGAGGATACCCTAGTTATTATGTAGCATCTGGGCCACCACTGGTTTATTTCC
AGCCATGTCATACAGTGCAGTTCCCTGTGCAAAATGGTATGATGTAAGAAATGCACGTACCAGG
AGTTTTGCTTAAGCACCAATGAAAGGCAGTTTTCCAAGTTCTGTAAAAAGTTAAGATCTATTTT
TGTGTAGTTGCCAACTATTTTTCAACAGTTGAAGCGTCAAAAATCATAGTAGATAAGGTATCAT
CTCTAAACTGACATTTGAACGTGATCATTGAATGTTGTAACTGTAAAATATTTCAAATGTAGTA
GAATACTTGAAATGATTCTTCAAGTCTTACTGACGCAGATTTACTGTGACCAGGATAAGATGAG
TACCTATTTGGCTAACATCTGAAAGAACACTTCTAATGTTTTCAAAAGAAGTGTAGTGAAGATA
TATTAACAACATTTTTATGTACAATTAGTTCCTTGTTATACTGTTTTTTCCTTAGCAAATAATA
ACAGGAAATTTTTGTTCATAAATTGAAAGTATCTGATTTCAAAGATAATTTTAAATGATGTTAA
AACAATGGATTGTAAGCCCGTGTTTCCCAGTACAACTTATTGGCTTGAAAACACTACTAAAATT
TAAAGAACCACTTGGAAAAGTATTCTGGAAAACAGGAATGTTTCCCTTATCTTGTAAGAATTCA
GCTAATCTGTGGATCAAAAAGTACCTTTCAGAACAACCAAGAACATAACTTACTATGCAGGGAT
TTTTGGAATGTAATTAAGTTGAAATGAAGAAAAAGACCAATTCTGAACATGAAACTATTCTATC
ATCATCTCTTAAGATAAAACTAAATAGAAGACAAAAAGAAAAATACCACCACCAATGACAAAAA
ATTAGAGATTTAGCCATGACGTTTAAGATCTCTTTTACCTATTTCGTCAGGATCCTAATACATC
TGGAAATGTTCATCATTAGATATTGAAAGCACTTCTCACTAAATGAAAGATTTTTCCAACACCA
AAGATTTGTTTCTAGTATCTTCTTCAATGTTAGATTTTAGTTAATACTACACTTTTCCAGTATT
GCATATATTCGCCATTATTCTGAATATCTTCTCATTACATCAGATATCCACTAGCAAATCTATG
TTTTGTGGTTTAAAATGAATTTTCATACATGTTTAAAAGAGCTGTTATATGGGATGATATATAA
CAAACTATTCTGAATGAATGTCAATCAGGCCATCGAAAAATTTAAGTATTTTCCTATCACACAA
GAACCAGCAAAATCTTGAAATGTGCTACCTATAGACTCTATGTAAAGTCATTTTTCAGTATTGT
AGTATTGAATAGAATAGTACGATTTCTATGGAATTTTTCAAGTAGCCAGTATTTCTGATGTTTT
CTACACATACATCACTGGGCATTGGTGTGTTTAAATAATTATATGTGTAATACAAAATCCCAAG
ACTTTAAAATATTTGGATTTACCTTTTCAAGTGGAGTTAAAATAAAAATTATTAAATAATAAAT
TAAGAAAATGTATCACTGTATCTATCTACATCTTATATTAGCTAAAACATAATGATCATTCTTT
GTGTCTCTAACATAAAAATTTTACTTTTTAGAAAGTGGAAATGCATATACATAAAACTGAAGTT
ACTCATCAGTAACAAAAAATAATTCTAAAAGAGACAGGGGGTTATTTGAGAATAAGAGGATTAA
GTTAGTGGTATGGTTGCTAAAGGTTCAGTATTTCCCAAGGTTCTTCAATAATAGAAATGTGAAG
GTGTCTGGGAGCGTCTTATCATATCTGCCATCCCATTGCTTCTTACTGGTATTTGCTCCGATCT
CTTTATTTCCTAAGAAGCTATTTTTTCATGTCATTTTCCTAAAGCTTTAAGTTGTAATGGAGGG
AAAATAACCCAAAAGGTACATGTTTTCTTCTAACATTTTAAGTGTCTTGATTTCTTTGGAAAAA
GTTCAACATACACATATACATATATGTATATATTTTCTCAGGTTAGAGAATGCA

hide sequence

RefSeq Acc Id:

XM_017601964 ⟹ XP_017457453

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	77,025,699 - 77,042,306 (+)	NCBI
mRatBN7.2	X	72,953,376 - 72,974,562 (+)	NCBI
Rnor_6.0	X	78,978,489 - 78,994,467 (+)	NCBI

Sequence:

show sequence

TCTGGCAACCTGTGAATATCTGTATGATTTATTCACCCATATTATTTTTAATTCTAAGAAAAAA
CAAGGCCTACCGGCATAACAGTAAGGTGGAGACTTGGTGAGAGGAGAGTTGCTGAGAGAGGAAG
GGAGTAAGAATGGGTGTATGAAGTTATTAAAAACATAAAGTTTAAATAATATTTACTATAGCCT
ACTACATGTCTCACTTTAAACCATGGTCCTAGATATGAGCATTATTGATGCAATAGTATATCCT
TTATCTCCTAGCAACAGTAGCCATAGTGTTGTGAAAAGTAAGGTACAGAAACTGTGGGGATATA
AGTCAATGGGGAACTCTATAGAGAAGGAAGTTAGTTTTAGTTCTGTAGGTTGTTAAGTCCAAAT
TCAACAAAGTATGTTGTCAAAACTGTGGTGGTTACCAATCTTGAAGTTTTCTAAAGTAGGAGAC
ACCTACCTCTCTCTATAAGCATTTACTTTGTTCTATTGACTTCACAATGTCGGAGATCAGATTC
AGCAATCTCACTTGGGATCACATTGTAACACTGGACCGTGTGTTAGATGAAGTAATCCCAATTC
ATGGAAGGGGCAATTTCCCCACGCTGGAGGTAAAACCAAAAGATATTGTTCATGTTGTAAAAGA
TCAACTCATAAAGCAGGGCATTATTGTTAAAGATACAAGATTGAATGGCTCTACAGCAAGTTAC
ATACTCGCAAGCCATAATGGAATCAGCTATAAAGATTTGGACATTATTTTTGGTGTTGATCTTC
CAAGCGATCAAGAATTTCAGGTAGTTAAGGATGCAGTTTTAGGCTGTCTACTTGACTTTTTACC
AAAAGGTGTTAAGAAAGAAAAGATTACCCTAAAAACCATGAAAGAAGCATATGTGCAGAAAATG
GTAAAAATTTGCAGTAACAACGATCGTTGGAGTCTCATCTCCCTTTCAAATAACACTGGGAAGA
ATGTAGAACTAAAATTTGTGAACTCACTCAGACGACAATTTGAATTTAGTGTAGATTCTTTCCA
AATTCTTTTGGATTCCATGTTAGATTTTTATAGTGTCCCAAATGCCAAGCTCACCAAAGAATCC
TGTCCTGTTGTGGTGGCTGAAAGTATGTATGGCGACTTCCAAGAAGCAATGGTCCATTTGAAAT
ACAAGCTAATATCTACCCGAAAGCCTGAAGAGATCAGAGGTGGTGGCCTTTTGAAGTATAGCAA
TTTGTTGGTTCGTGACTTCAAGCCAGCCTGCCAAACAGAAATTAAGACTCTGGAACGTTATATG
TGTTCTAGATTTTTCATTGACTTTCCTGATGTAGCAGAACAGCAAAAGAAAATTGAATCGTACC
TCCGCAACCATTTCATAGGTGAAGAAAAGAGCAAGTATGAGTACCTTATGACCTTGCATGGAGT
TGTGAACCAAAGCACTGTCTGCCTCATGGGATATGAAAGAAGGCAGACCCTTAACATGATCACC
CTTTTGGCTTTGAAAGTACTTGGAGAACAGAATATTTTACCTAGTACAGACAACGTAACTTGCT
TTTATCAACCTGCTCCATATCTAGTTCTTGAGGGAGGATACCCTAGTTATTATGTAGCATCTGG
GCCACCACTGGTTTATTTCCAGCCATGTCATACAGTGCAGTTCCCTGTGCAAAATGGTATGATG
TAAGAAATGCACGTACCAGGAGTTTTGCTTAAGCACCAATGAAAGGCAGTTTTCCAAGTTCTGT
AAAAAGTTAAGATCTATTTTTGTGTAGTTGCCAACTATTTTTCAACAGTTGAAGCGTCAAAAAT
CATAGTAGATAAGGTATCATCTCTAAACTGACATTTGAACGTGATCATTGAATGTTGTAACTGT
AAAATATTTCAAATGTAGTAGAATACTTGAAATGATTCTTCAAGTCTTACTGACGCAGATTTAC
TGTGACCAGGATAAGATGAGTACCTATTTGGCTAACATCTGAAAGAACACTTCTAATGTTTTCA
AAAGAAGTGTAGTGAAGATATATTAACAACATTTTTATGTACAATTAGTTCCTTGTTATACTGT
TTTTTCCTTAGCAAATAATAACAGGAAATTTTTGTTCATAAATTGAAAGTATCTGATTTCAAAG
ATAATTTTAAATGATGTTAAAACAATGGATTGTAAGCCCGTGTTTCCCAGTACAACTTATTGGC
TTGAAAACACTACTAAAATTTAAAGAACCACTTGGAAAAGTATTCTGGAAAACAGGAATGTTTC
CCTTATCTTGTAAGAATTCAGCTAATCTGTGGATCAAAAAGTACCTTTCAGAACAACCAAGAAC
ATAACTTACTATGCAGGGATTTTTGGAATGTAATTAAGTTGAAATGAAGAAAAAGACCAATTCT
GAACATGAAACTATTCTATCATCATCTCTTAAGATAAAACTAAATAGAAGACAAAAAGAAAAAT
ACCACCACCAATGACAAAAAATTAGAGATTTAGCCATGACGTTTAAGATCTCTTTTACCTATTT
CGTCAGGATCCTAATACATCTGGAAATGTTCATCATTAGATATTGAAAGCACTTCTCACTAAAT
GAAAGATTTTTCCAACACCAAAGATTTGTTTCTAGTATCTTCTTCAATGTTAGATTTTAGTTAA
TACTACACTTTTCCAGTATTGCATATATTCGCCATTATTCTGAATATCTTCTCATTACATCAGA
TATCCACTAGCAAATCTATGTTTTGTGGTTTAAAATGAATTTTCATACATGTTTAAAAGAGCTG
TTATATGGGATGATATATAACAAACTATTCTGAATGAATGTCAATCAGGCCATCGAAAAATTTA
AGTATTTTCCTATCACACAAGAACCAGCAAAATCTTGAAATGTGCTACCTATAGACTCTATGTA
AAGTCATTTTTCAGTATTGTAGTATTGAATAGAATAGTACGATTTCTATGGAATTTTTCAAGTA
GCCAGTATTTCTGATGTTTTCTACACATACATCACTGGGCATTGGTGTGTTTAAATAATTATAT
GTGTAATACAAAATCCCAAGACTTTAAAATATTTGGATTTACCTTTTCAAGTGGAGTTAAAATA
AAAATTATTAAATAATAAATTAAGAAAATGTATCACTGTATCTATCTACATCTTATATTAGCTA
AAACATAATGATCATTCTTTGTGTCTCTAACATAAAAATTTTACTTTTTAGAAAGTGGAAATGC
ATATACATAAAACTGAAGTTACTCATCAGTAACAAAAAATAATTCTAAAAGAGACAGGGGGTTA
TTTGAGAATAAGAGGATTAAGTTAGTGGTATGGTTGCTAAAGGTTCAGTATTTCCCAAGGTTCT
TCAATAATAGAAATGTGAAGGTGTCTGGGAGCGTCTTATCATATCTGCCATCCCATTGCTTCTT
ACTGGTATTTGCTCCGATCTCTTTATTTCCTAAGAAGCTATTTTTTCATGTCATTTTCCTAAAG
CTTTAAGTTGTAATGGAGGGAAAATAACCCAAAAGGTACATGTTTTCTTCTAACATTTTAAGTG
TCTTGATTTCTTTGGAAAAAGTTCAACATACACATATACATATATGTATATATTTTCTCAGGTT
AGAGAATGCA

hide sequence

RefSeq Acc Id:

XM_039099586 ⟹ XP_038955514

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	77,025,699 - 77,042,306 (+)	NCBI
mRatBN7.2	X	72,953,375 - 72,974,562 (+)	NCBI

RefSeq Acc Id:

XM_063279893 ⟹ XP_063135963

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	76,974,069 - 77,041,795 (+)	NCBI

RefSeq Acc Id:

XM_063279894 ⟹ XP_063135964

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	76,974,069 - 77,041,795 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001100406	(Get FASTA)	NCBI Sequence Viewer
	NP_001420887	(Get FASTA)	NCBI Sequence Viewer
	XP_006257243	(Get FASTA)	NCBI Sequence Viewer
	XP_008771557	(Get FASTA)	NCBI Sequence Viewer
	XP_008771560	(Get FASTA)	NCBI Sequence Viewer
	XP_017457449	(Get FASTA)	NCBI Sequence Viewer
	XP_017457453	(Get FASTA)	NCBI Sequence Viewer
	XP_038955514	(Get FASTA)	NCBI Sequence Viewer
	XP_063135963	(Get FASTA)	NCBI Sequence Viewer
	XP_063135964	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDM07108	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000035000.4
	ENSRNOP00000082477.1
	ENSRNOP00000089113.1
	ENSRNOP00000093247.1

RefSeq Acc Id:

NP_001100406 ⟸ NM_001106936

- UniProtKB:

D4A3M4 (UniProtKB/TrEMBL), A6IV72 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSEIRFSNLTWDHIVTLDRVLDEVIPIHGRGNFPTLEVKPKDIVHVVKDQLIKQGIIVKDTRLN
GSTASYILASHNGISYKDLDIIFGVDLPSDQEFQVVKDAVLGCLLDFLPKGVKKEKITLKTMKE
AYVQKMVKICSNNDRWSLISLSNNTGKNVELKFVNSLRRQFEFSVDSFQILLDSMLDFYSVPNA
KLTKESCPVVVAESMYGDFQEAMVHLKYKLISTRKPEEIRGGGLLKYSNLLVRDFKPACQTEIK
TLERYMCSRFFIDFPDVAEQQKKIESYLRNHFIGEEKSKYEYLMTLHGVVNQSTVCLMGYERRQ
TLNMITLLALKVLGEQNILPSTDNVTCFYQPAPYLVLEGGYPSYYVASGPPLVYFQPCHTVQFP
VQNGMM

hide sequence

RefSeq Acc Id:	XP_006257243 ⟸ XM_006257181
- Peptide Label:	isoform X1
- UniProtKB:	D4A3M4 (UniProtKB/TrEMBL), A6IV72 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEIRFSNLTWDHIVTLDRVLDEVIPIHGRGNFPTLEVKPKDIVHVVKDQLIKQGIIVKDTRLN GSTASYILASHNGISYKDLDIIFGVDLPSDQEFQVVKDAVLGCLLDFLPKGVKKEKITLKTMKE AYVQKMVKICSNNDRWSLISLSNNTGKNVELKFVNSLRRQFEFSVDSFQILLDSMLDFYSVPNA KLTKESCPVVVAESMYGDFQEAMVHLKYKLISTRKPEEIRGGGLLKYSNLLVRDFKPACQTEIK TLERYMCSRFFIDFPDVAEQQKKIESYLRNHFIGEEKSKYEYLMTLHGVVNQSTVCLMGYERRQ TLNMITLLALKVLGEQNILPSTDNVTCFYQPAPYLVLEGGYPSYYVASGPPLVYFQPCHTVQFP VQNGMM hide sequence

RefSeq Acc Id:	XP_008771560 ⟸ XM_008773338
- Peptide Label:	isoform X1
- UniProtKB:	D4A3M4 (UniProtKB/TrEMBL), A6IV72 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEIRFSNLTWDHIVTLDRVLDEVIPIHGRGNFPTLEVKPKDIVHVVKDQLIKQGIIVKDTRLN GSTASYILASHNGISYKDLDIIFGVDLPSDQEFQVVKDAVLGCLLDFLPKGVKKEKITLKTMKE AYVQKMVKICSNNDRWSLISLSNNTGKNVELKFVNSLRRQFEFSVDSFQILLDSMLDFYSVPNA KLTKESCPVVVAESMYGDFQEAMVHLKYKLISTRKPEEIRGGGLLKYSNLLVRDFKPACQTEIK TLERYMCSRFFIDFPDVAEQQKKIESYLRNHFIGEEKSKYEYLMTLHGVVNQSTVCLMGYERRQ TLNMITLLALKVLGEQNILPSTDNVTCFYQPAPYLVLEGGYPSYYVASGPPLVYFQPCHTVQFP VQNGMM hide sequence

RefSeq Acc Id:	XP_008771557 ⟸ XM_008773335
- Peptide Label:	isoform X1
- UniProtKB:	D4A3M4 (UniProtKB/TrEMBL), A6IV72 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEIRFSNLTWDHIVTLDRVLDEVIPIHGRGNFPTLEVKPKDIVHVVKDQLIKQGIIVKDTRLN GSTASYILASHNGISYKDLDIIFGVDLPSDQEFQVVKDAVLGCLLDFLPKGVKKEKITLKTMKE AYVQKMVKICSNNDRWSLISLSNNTGKNVELKFVNSLRRQFEFSVDSFQILLDSMLDFYSVPNA KLTKESCPVVVAESMYGDFQEAMVHLKYKLISTRKPEEIRGGGLLKYSNLLVRDFKPACQTEIK TLERYMCSRFFIDFPDVAEQQKKIESYLRNHFIGEEKSKYEYLMTLHGVVNQSTVCLMGYERRQ TLNMITLLALKVLGEQNILPSTDNVTCFYQPAPYLVLEGGYPSYYVASGPPLVYFQPCHTVQFP VQNGMM hide sequence

RefSeq Acc Id:	XP_017457449 ⟸ XM_017601960
- Peptide Label:	isoform X1
- UniProtKB:	D4A3M4 (UniProtKB/TrEMBL), A6IV72 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEIRFSNLTWDHIVTLDRVLDEVIPIHGRGNFPTLEVKPKDIVHVVKDQLIKQGIIVKDTRLN GSTASYILASHNGISYKDLDIIFGVDLPSDQEFQVVKDAVLGCLLDFLPKGVKKEKITLKTMKE AYVQKMVKICSNNDRWSLISLSNNTGKNVELKFVNSLRRQFEFSVDSFQILLDSMLDFYSVPNA KLTKESCPVVVAESMYGDFQEAMVHLKYKLISTRKPEEIRGGGLLKYSNLLVRDFKPACQTEIK TLERYMCSRFFIDFPDVAEQQKKIESYLRNHFIGEEKSKYEYLMTLHGVVNQSTVCLMGYERRQ TLNMITLLALKVLGEQNILPSTDNVTCFYQPAPYLVLEGGYPSYYVASGPPLVYFQPCHTVQFP VQNGMM hide sequence

RefSeq Acc Id:	XP_017457453 ⟸ XM_017601964
- Peptide Label:	isoform X1
- UniProtKB:	D4A3M4 (UniProtKB/TrEMBL), A6IV72 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEIRFSNLTWDHIVTLDRVLDEVIPIHGRGNFPTLEVKPKDIVHVVKDQLIKQGIIVKDTRLN GSTASYILASHNGISYKDLDIIFGVDLPSDQEFQVVKDAVLGCLLDFLPKGVKKEKITLKTMKE AYVQKMVKICSNNDRWSLISLSNNTGKNVELKFVNSLRRQFEFSVDSFQILLDSMLDFYSVPNA KLTKESCPVVVAESMYGDFQEAMVHLKYKLISTRKPEEIRGGGLLKYSNLLVRDFKPACQTEIK TLERYMCSRFFIDFPDVAEQQKKIESYLRNHFIGEEKSKYEYLMTLHGVVNQSTVCLMGYERRQ TLNMITLLALKVLGEQNILPSTDNVTCFYQPAPYLVLEGGYPSYYVASGPPLVYFQPCHTVQFP VQNGMM hide sequence

Ensembl Acc Id:

ENSRNOP00000035000 ⟸ ENSRNOT00000031200

RefSeq Acc Id:	XP_038955514 ⟸ XM_039099586
- Peptide Label:	isoform X1
- UniProtKB:	D4A3M4 (UniProtKB/TrEMBL), A6IV72 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000089113 ⟸ ENSRNOT00000108845

Ensembl Acc Id:

ENSRNOP00000093247 ⟸ ENSRNOT00000109528

Ensembl Acc Id:

ENSRNOP00000082477 ⟸ ENSRNOT00000096507

RefSeq Acc Id:	XP_063135963 ⟸ XM_063279893
- Peptide Label:	isoform X1
- UniProtKB:	A6IV72 (UniProtKB/TrEMBL), D4A3M4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135964 ⟸ XM_063279894
- Peptide Label:	isoform X1
- UniProtKB:	A6IV72 (UniProtKB/TrEMBL), D4A3M4 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A3M4-F1-model_v2	AlphaFold	D4A3M4	1-390	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1559589	AgrOrtholog
BioCyc Gene	G2FUF-1886	BioCyc
Ensembl Genes	ENSRNOG00000023637	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000031200.6	UniProtKB/TrEMBL
	ENSRNOT00000096507.1	UniProtKB/TrEMBL
	ENSRNOT00000108845.1	UniProtKB/TrEMBL
	ENSRNOT00000109528.1	UniProtKB/TrEMBL
InterPro	DUF1693	UniProtKB/TrEMBL
KEGG Report	rno:302368	UniProtKB/TrEMBL
NCBI Gene	302368	ENTREZGENE
PANTHER	PTHR12974	UniProtKB/TrEMBL
	TERMINAL NUCLEOTIDYLTRANSFERASE 5D	UniProtKB/TrEMBL
Pfam	DUF1693	UniProtKB/TrEMBL
PhenoGen	Tent5d	PhenoGen
RatGTEx	ENSRNOG00000023637	RatGTEx
SMART	DUF1693	UniProtKB/TrEMBL
UniProt	A6IV72	ENTREZGENE, UniProtKB/TrEMBL
	D4A3M4	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-04-30	Tent5d	terminal nucleotidyltransferase 5D	Fam46d	family with sequence similarity 46, member D	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2011-05-25	Fam46d	family with sequence similarity 46, member D	RGD1559589	similar to family with sequence similarity 46, member D	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1559589	similar to family with sequence similarity 46, member D	RGD1559589_predicted	similar to family with sequence similarity 46, member D (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1559589_predicted	similar to family with sequence similarity 46, member D (predicted)	LOC302368	similar to family with sequence similarity 46, member D	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC302368	similar to family with sequence similarity 46, member D			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar