| 1000 | 10043881 | Adip24_m | adiposity 24 (mouse) | | | Not determined | | 10 | 82392803 | 116392952 | Mouse | n/a | region | qtl |
| 1000 | 1300533 | Aem3_m | anti-erythrocyte autoantibody modifier 3 (mouse) | | | Not determined | | 10 | 65490938 | 99491121 | Mouse | n/a | region | qtl |
| 1000 | 1301129 | Alcp15_m | alcohol preference locus 15 (mouse) | | | Not determined | | 10 | 9890264 | 43890391 | Mouse | n/a | region | qtl |
| 1000 | 1302133 | Alcp16_m | alcohol preference locus 16 (mouse) | | | Not determined | | 10 | 9890264 | 43890391 | Mouse | n/a | region | qtl |
| 1000 | 4142313 | Angvq1_m | angiogenesis by VEGF QTL 1 (mouse) | | | Not determined | | | 46720403 | 82491121 | Mouse | n/a | region | qtl |
| 1000 | 1301659 | Arrd2_m | age-related retinal degeneration 2 (mouse) | | | Not determined | | 10 | 20283185 | 26890391 | Mouse | n/a | region | qtl |
| 1000 | 1302092 | Ath11_m | atherosclerosis 11 (mouse) | | | Not determined | | 10 | 6151945 | 58693521 | Mouse | n/a | region | qtl |
| 1000 | 1300882 | Ath17_m | atherosclerosis 17 (mouse) | | | Not determined | | 10 | 51091490 | 85091639 | Mouse | n/a | region | qtl |
| 1000 | 1357813 | Ath20_m | atherosclerosis 20 (mouse) | | | Not determined | | 10 | 3283185 | 37283334 | Mouse | n/a | region | qtl |
| 1000 | 1302150 | Bbaa18_m | B.burgdorferi-associated arthritis 18 (mouse) | | | Not determined | | 10 | 49338012 | 83338157 | Mouse | n/a | region | qtl |
| 1000 | 21079434 | Bdym5_m | body mass QTL 5 (mouse) | | | | | 10 | 40545996 | 54836096 | Mouse | n/a | region | qtl |
| 1000 | 1357558 | Bmch4_m | bone mechanical trait 4 (mouse) | | | Not determined | | 10 | 31577136 | 65577284 | Mouse | n/a | region | qtl |
| 1000 | 13208570 | Bmiq9_m | body mass index QTL 9 (mouse) | | | | | 10 | 12875744 | 24875898 | Mouse | n/a | region | qtl |
| 1000 | 1301787 | Bsc1_m | brain size control 1 (mouse) | | | Not determined | | 10 | 58516969 | 92517096 | Mouse | n/a | region | qtl |
| 1000 | 26884407 | Bzwq14_m | bi-zygomatic width QTL 14, 16 wee (mouse) | | | | | 10 | 45476096 | 120635905 | Mouse | n/a | region | qtl |
| 1000 | 26884411 | Bzwq8_m | bi-zygomatic width QTL 8, 10 week (mouse) | | | | | 10 | 44876096 | 115935905 | Mouse | n/a | region | qtl |
| 1000 | 1300898 | Cfid_m | cystic fibrosis intestinal distress (mouse) | | | Not determined | | 10 | 29720403 | 63720483 | Mouse | n/a | region | qtl |
| 1000 | 12904011 | Cfq11_m | conditioned fear QTL 11 (mouse) | | | | | 10 | 56480156 | 60940841 | Mouse | n/a | region | qtl |
| 1000 | 10755518 | Chol16_m | cholesterol 16 (mouse) | | | | | 10 | 18915043 | 52915043 | Mouse | n/a | region | qtl |
| 1000 | 1301380 | Cia8_m | collagen induced arthritis QTL 8 (mouse) | | | Not determined | | 10 | 51493400 | 82491121 | Mouse | n/a | region | qtl |
| 1000 | 26884426 | Cvht1_m | cranial vault height 1, 5 week (mouse) | | | | | 10 | 24675898 | 121035905 | Mouse | n/a | region | qtl |
| 1000 | 26884421 | Cvht5_m | cranial vault height 5, 10 week (mouse) | | | | | 10 | 45576096 | 69135830 | Mouse | n/a | region | qtl |
| 1000 | 26884403 | Cvht8_m | cranial vault height 8, 16 week (mouse) | | | | | 10 | 22875899 | 91035862 | Mouse | n/a | region | qtl |
| 1000 | 1300997 | Eae15_m | susceptibility to experimental allergic encephalomyelitis 15 (mouse) | | | Not determined | | 10 | 4408154 | 38408276 | Mouse | n/a | region | qtl |
| 1000 | 1301502 | Eae17_m | susceptibility to experimental allergic encephalomyelitis 17 (mouse) | | | Not determined | | 10 | 51091490 | 85091639 | Mouse | n/a | region | qtl |
| 1000 | 1558757 | Eae34_m | experimental allergic encephalomyelitis susceptibility 34 (mouse) | | | Not determined | | 10 | 21408154 | 114217230 | Mouse | n/a | region | qtl |
| 1000 | 4141956 | Egq7_m | early growth QTL 7 (mouse) | | | Not determined | | | 12704051 | 84079784 | Mouse | n/a | region | qtl |
| 1000 | 4142365 | Egq9_m | early growth QTL 9 (mouse) | | | Not determined | | | 84079650 | 122041528 | Mouse | n/a | region | qtl |
| 1000 | 1302060 | El3_m | epilepsy 3 (mouse) | | | Not determined | | 10 | 65490938 | 99491121 | Mouse | n/a | region | qtl |
| 1000 | 1357622 | Espq3_m | embryo survival preimplantation QTL 3 (mouse) | | | Not determined | | 10 | 84079650 | 122041528 | Mouse | n/a | region | qtl |
| 1000 | 1357594 | Estoq3_m | embryo survival total QTL 3 (mouse) | | | Not determined | | 10 | 84079650 | 122041528 | Mouse | n/a | region | qtl |
| 1000 | 12879494 | Facq1_m | fear acquisition QTL 1 (mouse) | | | | | 10 | 1 | 31279130 | Mouse | n/a | region | qtl |
| 1000 | 1300975 | Fembrs3_m | femur breaking strength 3 (mouse) | | | Not determined | | 10 | 75338568 | 109338767 | Mouse | n/a | region | qtl |
| 1000 | 4142137 | Femwf3_m | femur work to failure 3 (mouse) | | | Not determined | | | 75338568 | 109338767 | Mouse | n/a | region | qtl |
| 1000 | 1300759 | Geot_m | geotaxia (mouse) | | | Not determined | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 11353843 | Gluq1_m | blood glucose QTL 1 (mouse) | | | | | 10 | 73987216 | 125515907 | Mouse | n/a | region | qtl |
| 1000 | 10045632 | Heal16_m | wound healing/regeneration 16 (mouse) | | | Not determined | | 10 | 30974499 | 64974630 | Mouse | n/a | region | qtl |
| 1000 | 1357737 | Hpcr2_m | hepatocarcinogen resistance 2 (mouse) | | | Not determined | | 10 | 49848222 | 83848397 | Mouse | n/a | region | qtl |
| 1000 | 1357656 | Hrtq3_m | heart weight QTL 3 (mouse) | | | Not determined | | 10 | 12704051 | 84079784 | Mouse | n/a | region | qtl |
| 1000 | 26884405 | Huml2_m | humerus length 2, 5 week (mouse) | | | | | 10 | 69735830 | 130430862 | Mouse | n/a | region | qtl |
| 1000 | 26884400 | Huml5_m | humerus length 5, 16 week (mouse) | | | | | 10 | 46276096 | 69235830 | Mouse | n/a | region | qtl |
| 1000 | 26884394 | Humsd3_m | humerus midshaft diameter 3, 10 week (mouse) | | | | | 10 | 22375899 | 51076096 | Mouse | n/a | region | qtl |
| 1000 | 1558857 | Igan1_m | IgA nephropathy 1 (mouse) | | | Not determined | | 10 | 17718313 | 29704155 | Mouse | n/a | region | qtl |
| 1000 | 1301737 | Insq9_m | insulin QTL 9 (mouse) | | | Not determined | | 10 | 65490938 | 99491121 | Mouse | n/a | region | qtl |
| 1000 | 10045641 | Jckm3_m | juvenile cystic kidney modifier 3 (mouse) | | | Not determined | | 10 | 49848187 | 83848412 | Mouse | n/a | region | qtl |
| 1000 | 1357825 | Kidpq2_m | kidney weight percentage QTL 2 (mouse) | | | Not determined | | 10 | 12704051 | 84079784 | Mouse | n/a | region | qtl |
| 1000 | 4141387 | Lgaq5_m | late growth adjusted QTL 5 (mouse) | | | Not determined | | | 84079650 | 122041528 | Mouse | n/a | region | qtl |
| 1000 | 38455999 | Lick3_m | lick rate 3 (mouse) | | | | | 10 | 61873031 | 69373082 | Mouse | n/a | region | qtl |
| 1000 | 1301966 | Lifespan2_m | life span 2 (mouse) | | | Not determined | | 10 | 49848222 | 83848397 | Mouse | n/a | region | qtl |
| 1000 | 1558865 | Lith21_m | lithogenic gene 21 (mouse) | | | Not determined | | 10 | 8525003 | 42525126 | Mouse | n/a | region | qtl |
| 1000 | 1301165 | Lith7_m | lithogenic gene 7 (mouse) | | | Not determined | | 10 | 82309418 | 116309657 | Mouse | n/a | region | qtl |
| 1000 | 1302035 | Lmb4_m | lupus in MRL and B6 F2 cross (mouse) | | | Not determined | | 10 | 66848187 | 92258673 | Mouse | n/a | region | qtl |
| 1000 | 1301003 | Lmblgq4_m | limb length QTL 4 (mouse) | | | Not determined | | 10 | 21591192 | 68091639 | Mouse | n/a | region | qtl |
| 1000 | 11059550 | Lmr32a_m | leishmaniasis resistance 32a (mouse) | | | | | 10 | 82309418 | 116309657 | Mouse | n/a | region | qtl |
| 1000 | 11059551 | Lmr32b_m | leishmaniasis resistance 32b (mouse) | | | | | 10 | 82309418 | 116309657 | Mouse | n/a | region | qtl |
| 1000 | 11059553 | Lmr32d_m | leishmaniasis resistance 32d (mouse) | | | | | 10 | 82309418 | 116309657 | Mouse | n/a | region | qtl |
| 1000 | 11059554 | Lmr32e_m | leishmaniasis resistance 32e (mouse) | | | | | 10 | 82309418 | 116309657 | Mouse | n/a | region | qtl |
| 1000 | 11059555 | Lmr32f_m | leishmaniasis resistance 32f (mouse) | | | | | 10 | 82309418 | 116309657 | Mouse | n/a | region | qtl |
| 1000 | 4141070 | Ltgq1_m | liver triglyceride QTL 1 (mouse) | | | Not determined | | | 41237326 | 75237326 | Mouse | n/a | region | qtl |
| 1000 | 11039497 | Ltpr5a_m | Leishmania tropica response 5a (mouse) | | | | | 10 | 73506901 | 107507047 | Mouse | n/a | region | qtl |
| 1000 | 39128215 | Lwq17_m | liver weight QTL 17 (mouse) | | | | | 10 | 12704051 | 84079784 | Mouse | n/a | region | qtl |
| 1000 | 14747004 | Mancz8_m | mandible centroid size 8 (mouse) | | | | | 10 | 82078412 | 116078412 | Mouse | n/a | region | qtl |
| 1000 | 14746991 | Manh68_m | mandible shape 68 (mouse) | | | | | 10 | 52280497 | 86280497 | Mouse | n/a | region | qtl |
| 1000 | 1302160 | Mbis2_m | Mycobacterium bovis-induced systemic lupus erythematosus 2 (mouse) | | | Not determined | | 10 | 20283185 | 56031223 | Mouse | n/a | region | qtl |
| 1000 | 1301796 | Mop2_m | morphine preference 2 (mouse) | | | Not determined | | 10 | 9289119 | 29028424 | Mouse | n/a | region | qtl |
| 1000 | 11533917 | Mts2_m | mammary tumor susceptibility 2 (mouse) | | | | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 4141054 | mwfh_m | modifier of white forlock hypopigmentation (mouse) | | | Not determined | | | 83017003 | 117017136 | Mouse | n/a | region | qtl |
| 1000 | 15039341 | Nmrs28_m | NAFLD-associated magnetic resonance shift 28 (mouse) | | | | | 10 | 351001 | 34351001 | Mouse | n/a | region | qtl |
| 1000 | 4142107 | Obrq12_m | obesity resistance QTL 12 (mouse) | | | Not determined | | | 73987216 | 82491121 | Mouse | n/a | region | qtl |
| 1000 | 1357740 | Obsty3_m | obesity 3 (mouse) | | | Not determined | | 10 | 8235478 | 116190980 | Mouse | n/a | region | qtl |
| 1000 | 1301448 | Pas11_m | pulmonary adenoma susceptibility 11 (mouse) | | | Not determined | | 10 | 9890264 | 43890391 | Mouse | n/a | region | qtl |
| 1000 | 4142169 | Pbwg16_m | postnatal body weight growth 16 (mouse) | | | Not determined | | 10 | 49848187 | 83848412 | Mouse | n/a | region | qtl |
| 1000 | 11353832 | Pcholq4_m | plasma cholesterol QTL 4 (mouse) | | | | | 10 | 73987216 | 125515907 | Mouse | n/a | region | qtl |
| 1000 | 1300790 | Pgia6_m | proteoglycan induced arthritis 6 (mouse) | | | Not determined | | 10 | 3810171 | 37810295 | Mouse | n/a | region | qtl |
| 1000 | 27095911 | Pglq15_m | pelvic girdle length QTL 15, 16 week (mouse) | | | | | 10 | 39175996 | 129635869 | Mouse | n/a | region | qtl |
| 1000 | 27095920 | Pglq9_m | pelvic girdle length QTL 9, 10 week (mouse) | | | | | 10 | 33775996 | 70835830 | Mouse | n/a | region | qtl |
| 1000 | 4141159 | Phl2_m | progressive hearing loss 2 (mouse) | | | Not determined | | 10 | 47974499 | 70112651 | Mouse | n/a | region | qtl |
| 1000 | 4142209 | Psrs1_m | psoriasis susceptibility 1 (mouse) | | | Not determined | | 10 | 26890264 | 46720483 | Mouse | n/a | region | qtl |
| 1000 | 12910789 | Pwgrq19_m | post-weaning growth rate QTL 19 (mouse) | | | | | 10 | 82828700 | 92169056 | Mouse | n/a | region | qtl |
| 1000 | 1302067 | Scc9_m | colon tumor susceptibility 9 (mouse) | | | Not determined | | 10 | 18259333 | 125575232 | Mouse | n/a | region | qtl |
| 1000 | 1357864 | Scfpq1_m | subcutaneous fat pad percentage QTL 1 (mouse) | | | Not determined | | 10 | 12704051 | 84079784 | Mouse | n/a | region | qtl |
| 1000 | 11251717 | Siim1_m | stress induced immobility 1 (mouse) | | | | | 10 | 78381268 | 112381268 | Mouse | n/a | region | qtl |
| 1000 | 26884450 | Sklq15_m | skull length QTL 15, 16 week (mouse) | | | | | 10 | 59335822 | 122335905 | Mouse | n/a | region | qtl |
| 1000 | 26884447 | Sklq9_m | skull length QTL 9, 10 week (mouse) | | | | | 10 | 67335830 | 111735905 | Mouse | n/a | region | qtl |
| 1000 | 1300597 | Skull14_m | skull morphology 14 (mouse) | | | Not determined | | 10 | 49848187 | 83848412 | Mouse | n/a | region | qtl |
| 1000 | 1300881 | Sluc29_m | susceptibility to lung cancer 29 (mouse) | | | Not determined | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 11532721 | Sluc44_m | susceptibility to lung cancer 44 (mouse) | | | | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 11532720 | Sluc44a_m | susceptibility to lung cancer 44a (mouse) | | | | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 11532725 | Sluc44b_m | susceptibility to lung cancer 44b (mouse) | | | | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 11532724 | Sluc44c_m | susceptibility to lung cancer 44c (mouse) | | | | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 11532723 | Sluc44d_m | susceptibility to lung cancer 44d (mouse) | | | | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 11532722 | Sluc44e_m | susceptibility to lung cancer 44e (mouse) | | | | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 11532718 | Sluc44f_m | susceptibility to lung cancer 44f (mouse) | | | | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 11532717 | Sluc44g_m | susceptibility to lung cancer 44g (mouse) | | | | | 10 | 1 | 26289265 | Mouse | n/a | region | qtl |
| 1000 | 4141382 | Ssrq4_m | stress response QTL 4 (mouse) | | | Not determined | | | 82490938 | 90856102 | Mouse | n/a | region | qtl |
| 1000 | 14697707 | Stsl2_m | Salmonella typhimurium susceptibility locus 2 (mouse) | | | | | 10 | 46276096 | 53876096 | Mouse | n/a | region | qtl |
| 1000 | 1301386 | Sysbp1_m | systolic blood pressure 1 (mouse) | | | Not determined | | 10 | 10108265 | 87401095 | Mouse | n/a | region | qtl |
| 1000 | 1357779 | Tesq3_m | testis weight QTL 3 (mouse) | | | Not determined | | 10 | 84079650 | 122041528 | Mouse | n/a | region | qtl |
| 1000 | 27226772 | Tibl13_m | tibia length 13, 10 week (mouse) | | | | | 10 | 18875748 | 129635869 | Mouse | n/a | region | qtl |
| 1000 | 27226764 | Tibl19_m | tibia length 19, 16 week (mouse) | | | | | 10 | 39175996 | 129635869 | Mouse | n/a | region | qtl |
| 1000 | 1357632 | Vtbt9_m | vertebral trabecular bone trait 9 (mouse) | | | Not determined | | 10 | 75338568 | 109338767 | Mouse | n/a | region | qtl |
| 1000 | 4142272 | W10q5_m | weight 10 weeks QTL 5 (mouse) | | | Not determined | | | 12704051 | 84079784 | Mouse | n/a | region | qtl |
| 1000 | 4141479 | W10q8_m | weight 10 weeks QTL 8 (mouse) | | | Not determined | | | 84079650 | 122041528 | Mouse | n/a | region | qtl |
| 1000 | 4142380 | W3q11_m | weight 3 weeks QTL 11 (mouse) | | | Not determined | | | 12704051 | 84079784 | Mouse | n/a | region | qtl |
| 1000 | 4141943 | W6q6_m | weight 6 weeks QTL 6 (mouse) | | | Not determined | | | 12704051 | 84079784 | Mouse | n/a | region | qtl |
| 1000 | 4142496 | W6q8_m | weight 6 weeks QTL 8 (mouse) | | | Not determined | | | 84079650 | 122041528 | Mouse | n/a | region | qtl |
| 1000 | 13208561 | Wght8_m | weight 8 (mouse) | | | | | 10 | 4950000 | 43875996 | Mouse | n/a | region | qtl |
| 1000 | 13208560 | Wght9_m | weight 9 (mouse) | | | | | 10 | 59835822 | 120835905 | Mouse | n/a | region | qtl |
| 1000 | 26884430 | Zlq5_m | zygomatic length QTL 5, 10 week (mouse) | | | | | 10 | 67835830 | 124835905 | Mouse | n/a | region | qtl |
| 1000 | 26884424 | Zlq9_m | zygomatic length QTL 9, 16 week (mouse) | | | | | 10 | 63935779 | 115935905 | Mouse | n/a | region | qtl |