| 1000 | 1300870 | Ath18_m | atherosclerosis 18 (mouse) | | | Not determined | | 12 | 18259966 | 52260067 | Mouse | n/a | region | qtl |
| 1000 | 1301925 | Ath6_m | atherosclerosis 6 (mouse) | | | Not determined | | 12 | 1 | 32758756 | Mouse | n/a | region | qtl |
| 1000 | 10401249 | Bglu15_m | blood glucose level 15 (mouse) | | | Not determined | | 12 | 10620642 | 44620809 | Mouse | n/a | region | qtl |
| 1000 | 13208568 | Bmiq11_m | body mass index QTL 11 (mouse) | | | | | 12 | 8050000 | 40049999 | Mouse | n/a | region | qtl |
| 1000 | 26884410 | Bzwq15_m | bi-zygomatic width QTL 15, 16 week (mouse) | | | | | 12 | 3650000 | 29749999 | Mouse | n/a | region | qtl |
| 1000 | 26884413 | Bzwq9_m | bi-zygomatic width QTL 9, 10 week (mouse) | | | | | 12 | 16150001 | 47746783 | Mouse | n/a | region | qtl |
| 1000 | 1301037 | Cd4ts5_m | CD4 T cell subset 5 (mouse) | | | Not determined | | 12 | 8352444 | 42352581 | Mouse | n/a | region | qtl |
| 1000 | 1301207 | Circp1_m | circadian photosensitivity 1 (mouse) | | | Not determined | | 12 | 1 | 33430339 | Mouse | n/a | region | qtl |
| 1000 | 1558978 | Cplaq10_m | circadian period of locomotor activity 10 (mouse) | | | Not determined | | 12 | 15341026 | 79040364 | Mouse | n/a | region | qtl |
| 1000 | 1301163 | Eae16_m | susceptibility to experimental allergic encephalomyelitis 16 (mouse) | | | Not determined | | 12 | 7723158 | 41723301 | Mouse | n/a | region | qtl |
| 1000 | 12904956 | Edlmmq10_m | extensor digitorum longus muscle mass QTL 10 (mouse) | | | | | 12 | 19739833 | 53739833 | Mouse | n/a | region | qtl |
| 1000 | 1301723 | Fcsa7_m | femoral cross-sectional area 7 (mouse) | | | Not determined | | 12 | 9491004 | 43491112 | Mouse | n/a | region | qtl |
| 1000 | 27226753 | Femd7_m | femur midshaft diameter 7, 10 week (mouse) | | | | | 12 | 9550000 | 84146774 | Mouse | n/a | region | qtl |
| 1000 | 10043848 | Hdlq90_m | HDL QTL 90 (mouse) | | | Not determined | | 12 | 17839939 | 51840081 | Mouse | n/a | region | qtl |
| 1000 | 1301574 | Lmblgq5_m | limb length QTL 5 (mouse) | | | Not determined | | 12 | 17596447 | 80956883 | Mouse | n/a | region | qtl |
| 1000 | 14746972 | Manh72_m | mandible shape 72 (mouse) | | | | | 12 | 10615281 | 44615281 | Mouse | n/a | region | qtl |
| 1000 | 4141660 | Nbwa1_m | NZB and NZW autoimmunity 1 (mouse) | | | Not determined | | 12 | 340134 | 34340302 | Mouse | n/a | region | qtl |
| 1000 | 15039339 | Nmrs29_m | NAFLD-associated magnetic resonance shift 29 (mouse) | | | | | 12 | 17825852 | 51825852 | Mouse | n/a | region | qtl |
| 1000 | 10043977 | Obq34_m | obesity QTL 34 (mouse) | | | Not determined | | 12 | 15147331 | 49147331 | Mouse | n/a | region | qtl |
| 1000 | 12910983 | Pifs1_m | peptide-induced fatal syndrome 1 (mouse) | | | | | 12 | 1 | 30433078 | Mouse | n/a | region | qtl |
| 1000 | 13524839 | Ppiq10_m | prepulse inhibition QTL 10 (mouse) | | | | | 12 | 13043195 | 54945798 | Mouse | n/a | region | qtl |
| 1000 | 13524843 | Ppiq8_m | prepulse inhibition QTL 8 (mouse) | | | | | 12 | 11043194 | 50945796 | Mouse | n/a | region | qtl |
| 1000 | 1302172 | Skts5_m | skin tumor susceptibility 5 (mouse) | | | Not determined | | 12 | 22148866 | 56149016 | Mouse | n/a | region | qtl |
| 1000 | 4141516 | slwr_m | slowlearner (mouse) | | | Not determined | | | 12392475 | 46392614 | Mouse | n/a | region | qtl |
| 1000 | 13207568 | Tcq14_m | total cholesterol QTL 14 (mouse) | | | | | 12 | 11660001 | 97176774 | Mouse | n/a | region | qtl |
| 1000 | 4142234 | Tmc1m3_m | Tmc1 modifier 3 (mouse) | | | Not determined | | 12 | 5418440 | 77031203 | Mouse | n/a | region | qtl |