| 1000 | 2317883 | Alcrsp26 | Alcohol response QTL 26 | 1.8 | 0.63 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 3 | 145526770 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 1298068 | Bp167 | Blood pressure QTL 167 | | 0.004 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 141074471 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 631541 | Bp81 | Blood pressure QTL 81 | 4 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 124122556 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 2312670 | Bw94 | Body weight QTL 94 | | 0.01 | inguinal fat pad mass (VT:0010424) | inguinal fat pad weight to body weight ratio (CMO:0001253) | 3 | 98535255 | 168026850 | Rat | n/a | region | qtl |
| 1000 | 2298477 | Eau4 | Experimental allergic uveoretinitis QTL 4 | | 0.0011 | uvea integrity trait (VT:0010551) | experimental autoimmune uveitis score (CMO:0001504) | 3 | 137398739 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 1559282 | Emca5 | Estrogen-induced mammary cancer QTL 5 | 3.9 | | mammary gland integrity trait (VT:0010552) | percentage of study population developing mammary tumors during a period of time (CMO:0000948) | 3 | 43827364 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 9589106 | Insul23 | Insulin level QTL 23 | 13.86 | 0.001 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 3 | 131635904 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 8552952 | Pigfal13 | Plasma insulin-like growth factor 1 level QTL 13 | | | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 3 | 138799500 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 1300161 | Rf10 | Renal function QTL 10 | 3.57 | | renal blood flow trait (VT:2000006) | absolute change in renal vascular resistance (CMO:0001900) | 3 | 161192952 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 2312673 | Scl63 | Serum cholesterol level QTL 63 | | 0.001 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 3 | 98535255 | 168026850 | Rat | n/a | region | qtl |
| 1000 | 2312659 | Slep7 | Serum leptin concentration QTL 7 | | 0.001 | blood leptin amount (VT:0005667) | serum leptin level (CMO:0000780) | 3 | 98535255 | 168026850 | Rat | n/a | region | qtl |
| 1000 | 2303620 | Vencon4 | Ventilatory control QTL 4 | 3.9 | | respiration trait (VT:0001943) | tidal volume (CMO:0000222) | 3 | 127162703 | 168026850 | Rat | n/a | region | qtl |
| 1000 | 8552791 | Vie2 | Viral induced encephalitis QTL 2 | 4.1 | | brain integrity trait (VT:0010579) | encephalitis incidence/prevalence measurement (CMO:0002361) | 3 | 145956084 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 1578666 | Vnigr1 | Vascular neointimal growth QTL 1 | 4.6 | | artery morphology trait (VT:0002191) | artery lumen area (CMO:0001409) | 3 | 149040888 | 168026850 | Rat | n/a | region | qtl |
| 1000 | 1578656 | Vnigr2 | Vascular neointimal growth QTL 2 | 4.2 | | artery morphology trait (VT:0002191) | lesioned artery residual lumen area (CMO:0001417) | 3 | 130656562 | 169034231 | Rat | n/a | region | qtl |
| 1000 | 1578653 | Vnigr3 | Vascular neointimal growth QTL 3 | 3.1 | | artery morphology trait (VT:0002191) | artery neointimal hyperplastic lesion area (CMO:0001414) | 3 | 130656562 | 169034231 | Rat | n/a | region | qtl |