| 1000 | 1641894 | Alcrsp12 | Alcohol response QTL 12 | | | response to alcohol trait (VT:0010489) | brain neurotensin receptor 1 density (CMO:0002068) | 9 | 32385133 | 77385133 | Rat | n/a | region | qtl |
| 1000 | 7207805 | Bmd88 | Bone mineral density QTL 88 | 4 | | femur mineral mass (VT:0010011) | total volumetric bone mineral density (CMO:0001728) | 9 | 27486036 | 63264281 | Rat | n/a | region | qtl |
| 1000 | 7207814 | Bmd91 | Bone mineral density QTL 91 | 3.5 | | femur size trait (VT:1000369) | femoral neck cross-sectional area (CMO:0001697) | 9 | 27486155 | 88333183 | Rat | n/a | region | qtl |
| 1000 | 631643 | Bp120 | Blood pressure QTL 120 | 3 | 0.004 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 9 | 25692373 | 70692373 | Rat | n/a | region | qtl |
| 1000 | 61352 | Bp34 | Blood pressure QTL 34 | 5 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 9 | 46952427 | 83686153 | Rat | n/a | region | qtl |
| 1000 | 6903937 | Bp356 | Blood pressure QTL 356 | | 0.001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 9 | 52686874 | 57216771 | Rat | n/a | region | qtl |
| 1000 | 11353947 | Bp392 | Blood pressure QTL 392 | | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 9 | 12216771 | 57216771 | Rat | n/a | region | qtl |
| 1000 | 11353949 | Bp393 | Blood pressure QTL 393 | | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 9 | 46579769 | 91579769 | Rat | n/a | region | qtl |
| 1000 | 7411571 | Bw138 | Body weight QTL 138 | 14.3 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 9 | 37642351 | 82642351 | Rat | n/a | region | qtl |
| 1000 | 1300180 | Bw14 | Body weight QTL 14 | 3.776 | | body mass (VT:0001259) | body weight (CMO:0000012) | 9 | 27486036 | 66757620 | Rat | n/a | region | qtl |
| 1000 | 631680 | Cm11 | Cardiac mass QTL 11 | 3.1 | 0.00089 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 9 | 24885099 | 69885099 | Rat | n/a | region | qtl |
| 1000 | 70218 | Cm28 | Cardiac mass QTL 28 | 8.3 | 0.0001 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 9 | 29075079 | 83686404 | Rat | n/a | region | qtl |
| 1000 | 7411609 | Foco16 | Food consumption QTL 16 | 25.6 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 9 | 12425463 | 57425463 | Rat | n/a | region | qtl |
| 1000 | 7411656 | Foco26 | Food consumption QTL 26 | 9.8 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 9 | 37642351 | 82642351 | Rat | n/a | region | qtl |
| 1000 | 10058949 | Gmadr5 | Adrenal mass QTL 5 | 2 | 0.014 | adrenal gland mass (VT:0010420) | both adrenal glands wet weight to body weight ratio (CMO:0002411) | 9 | 47248965 | 94124663 | Rat | n/a | region | qtl |
| 1000 | 9589133 | Insul26 | Insulin level QTL 26 | 17.96 | 0.001 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 9 | 12425463 | 57425463 | Rat | n/a | region | qtl |
| 1000 | 1598834 | Memor11 | Memory QTL 11 | 2.5 | | exploratory behavior trait (VT:0010471) | average horizontal distance in proximity to the target during voluntary locomotion in an experimental apparatus (CMO:0002674) | 9 | 41261034 | 90024806 | Rat | n/a | region | qtl |
| 1000 | 1598823 | Memor16 | Memory QTL 16 | 1.9 | | exploratory behavior trait (VT:0010471) | difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678) | 9 | 25754320 | 54885226 | Rat | n/a | region | qtl |
| 1000 | 70186 | Niddm26 | Non-insulin dependent diabetes mellitus QTL 26 | 3.87 | | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 9 | 25692342 | 92741406 | Rat | n/a | region | qtl |
| 1000 | 6903941 | Pur31 | Proteinuria QTL 31 | | 0.036 | total urine protein amount (VT:0000032) | urine protein excretion rate (CMO:0000759) | 9 | 46579769 | 91579769 | Rat | n/a | region | qtl |
| 1000 | 2290450 | Scl57 | Serum cholesterol level QTL 57 | 4.15 | | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 9 | 41261034 | 102531865 | Rat | n/a | region | qtl |
| 1000 | 10054125 | Srcrt7 | Stress Responsive Cort QTL 7 | 3.33 | 0.0011 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 9 | 1055222 | 93442944 | Rat | n/a | region | qtl |
| 1000 | 731164 | Uae25 | Urinary albumin excretion QTL 25 | 3.5 | 0.0001 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 9 | 29466970 | 107878528 | Rat | n/a | region | qtl |
| 1000 | 724544 | Uae9 | Urinary albumin excretion QTL 9 | 4.5 | | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 9 | 29075079 | 122095297 | Rat | n/a | region | qtl |
| 1000 | 8662828 | Vetf6 | Vascular elastic tissue fragility QTL 6 | 3.9 | | artery integrity trait (VT:0010639) | patent ductus arteriosus score (CMO:0002566) | 9 | 41261034 | 98606834 | Rat | n/a | region | qtl |