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| Relevance | RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | Annotations | Match | Type |
| 1000 | 631688 | Hcas2 | Hepatocarcinoma susceptibility QTL 2 | 3 | 0.0001 | liver integrity trait (VT:0010547) | liver tumorous lesion number (CMO:0001068) | 1 | 5655769 | 122614963 | Rat | n/a | region | qtl |
| 1000 | 6893352 | Bw100 | Body weight QTL 100 | 0.33 | 0.6 | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 17121542 | 62121542 | Rat | n/a | region | qtl |
| 1000 | 6893350 | Bw99 | Body weight QTL 99 | 0.87 | 0.16 | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 17121542 | 62121542 | Rat | n/a | region | qtl |
| 1000 | 70188 | BpQTLcluster1 | Blood pressure QTL cluster 1 | 4.864 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 1 | 21523906 | 90312401 | Rat | n/a | region | qtl | |
| 1000 | 70188 | BpQTLcluster1 | Blood pressure QTL cluster 1 | 4.864 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 21523906 | 90312401 | Rat | n/a | region | qtl | |
| 1000 | 70188 | BpQTLcluster1 | Blood pressure QTL cluster 1 | 4.864 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 1 | 21523906 | 90312401 | Rat | n/a | region | qtl | |
| 1000 | 70188 | BpQTLcluster1 | Blood pressure QTL cluster 1 | 4.864 | arterial blood pressure trait (VT:2000000) | pulse pressure (CMO:0000292) | 1 | 21523906 | 90312401 | Rat | n/a | region | qtl | |
| 1000 | 631495 | Bp96 | Blood pressure QTL 96 | 4.52 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 23406428 | 108057505 | Rat | n/a | region | qtl | |
| 1000 | 1358359 | Sradr1 | Stress Responsive Adrenal Weight QTL 1 | 4.74 | adrenal gland mass (VT:0010420) | both adrenal glands wet weight (CMO:0000164) | 1 | 25951907 | 130917265 | Rat | n/a | region | qtl | |
| 1000 | 70225 | Bp58 | Blood pressure QTL 58 | 3.3 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 34993530 | 173445086 | Rat | n/a | region | qtl | |
| 1000 | 10059597 | Bp377 | Blood pressure QTL 377 | 3.42 | 0.025 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 35377692 | 217372257 | Rat | n/a | region | qtl |
| 1000 | 2313098 | Bmd70 | Bone mineral density QTL 70 | 3.6 | 0.0001 | tibia mineral mass (VT:1000283) | cortical volumetric bone mineral density (CMO:0001730) | 1 | 43579208 | 126240667 | Rat | n/a | region | qtl |
| 1000 | 2313072 | Bss53 | Bone structure and strength QTL 53 | 4.3 | 0.0001 | tibia length (VT:0004357) | tibia length (CMO:0000450) | 1 | 43579208 | 126240667 | Rat | n/a | region | qtl |
| 1000 | 2313078 | Bss54 | Bone structure and strength QTL 54 | 3.5 | 0.0001 | tibia area (VT:1000281) | tibia midshaft cross-sectional area (CMO:0001717) | 1 | 43579208 | 126240667 | Rat | n/a | region | qtl |
| 1000 | 2313059 | Bss55 | Bone structure and strength QTL 55 | 3.2 | 0.0001 | tibia size trait (VT:0100001) | tibia midshaft cross-sectional area (CMO:0001717) | 1 | 43579208 | 126240667 | Rat | n/a | region | qtl |
| 1000 | 2313099 | Bss56 | Bone structure and strength QTL 56 | 2.4 | 0.0001 | tibia size trait (VT:0100001) | tibia midshaft endosteal cross-sectional area (CMO:0001716) | 1 | 43579208 | 126240667 | Rat | n/a | region | qtl |
| 1000 | 2313051 | Bss57 | Bone structure and strength QTL 57 | 3.7 | 0.0001 | tibia strength trait (VT:1000284) | bone polar moment of inertia (CMO:0001558) | 1 | 43579208 | 126240667 | Rat | n/a | region | qtl |
| 1000 | 2313094 | Bss58 | Bone structure and strength QTL 58 | 3.7 | 0.0001 | tibia strength trait (VT:1000284) | tibia total energy absorbed before break (CMO:0001736) | 1 | 43579208 | 126240667 | Rat | n/a | region | qtl |
| 1000 | 2313402 | Anxrr24 | Anxiety related response QTL 24 | aggression-related behavior trait (VT:0015014) | tameness/aggressiveness composite score (CMO:0002136) | 1 | 49147799 | 156446783 | Rat | n/a | region | qtl | ||
| 1000 | 1578654 | Bss10 | Bone structure and strength QTL 10 | 4 | femur morphology trait (VT:0000559) | femoral neck cortical cross-sectional area (CMO:0001702) | 1 | 49578577 | 169852184 | Rat | n/a | region | qtl | |
| 1000 | 634314 | Niddm44 | Non-insulin dependent diabetes mellitus QTL 44 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 1 | 49578693 | 217054291 | Rat | n/a | region | qtl | ||
| 1000 | 61342 | Bp27 | Blood pressure QTL 27 | 3.4 | 0.0006 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 57761301 | 104391981 | Rat | n/a | region | qtl |
| 1000 | 2300164 | Bmd44 | Bone mineral density QTL 44 | 5.4 | 0.0001 | lumbar vertebra mineral mass (VT:0010511) | volumetric bone mineral density (CMO:0001553) | 1 | 58209327 | 103209327 | Rat | n/a | region | qtl |
| 1000 | 2298545 | Neuinf8 | Neuroinflammation QTL 8 | 4.6 | nervous system integrity trait (VT:0010566) | spinal cord beta-2 microglobulin mRNA level (CMO:0002125) | 1 | 58354072 | 161711996 | Rat | n/a | region | qtl | |
| 1000 | 7421628 | Bp361 | Blood pressure QTL 361 | 0.001 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 1 | 64588516 | 125875986 | Rat | n/a | region | qtl | |
| 1000 | 1300121 | Hrtrt1 | Heart rate QTL 1 | 3.7 | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 1 | 66113339 | 122614963 | Rat | n/a | region | qtl | |
| 1000 | 1549903 | Bp267 | Blood pressure QTL 267 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 79134941 | 113593716 | Rat | n/a | region | qtl | ||
| 1000 | 7411712 | Strs4 | Sensitivity to stroke QTL 4 | 8.7 | cerebrum integrity trait (VT:0010549) | percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932) | 1 | 79689548 | 124689548 | Rat | n/a | region | qtl | |
| 1000 | 1578780 | Cm52 | Cardiac mass QTL 52 | 3.3 | 0.0001 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 1 | 82788437 | 239853971 | Rat | n/a | region | qtl |
| 1000 | 10054135 | Gmadr2 | Adrenal mass QTL 2 | 1.97 | 0.0129 | adrenal gland mass (VT:0010420) | both adrenal glands wet weight (CMO:0000164) | 1 | 83502376 | 128502376 | Rat | n/a | region | qtl |
| 1000 | 2313083 | Bmd74 | Bone mineral density QTL 74 | 4 | 0.0001 | tibia mineral mass (VT:1000283) | total volumetric bone mineral density (CMO:0001728) | 1 | 83656882 | 126240667 | Rat | n/a | region | qtl |
| 1000 | 61344 | Bp29 | Blood pressure QTL 29 | 7.5 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 1 | 85779320 | 130779320 | Rat | n/a | region | qtl | |
| 1000 | 1582234 | Gluco18 | Glucose level QTL 18 | 3.4 | 0.0003 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 1 | 85917265 | 130917265 | Rat | n/a | region | qtl |
| 1000 | 4889494 | Scort2 | Serum corticosterone level QTL 2 | 4.2 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 1 | 86776571 | 131776571 | Rat | n/a | region | qtl | |
| 1000 | 2300324 | Fetw1 | Fetal weight QTL 1 | 12.1 | 0.005 | fetal growth trait (VT:0004201) | fetal body weight (CMO:0002080) | 1 | 88634585 | 106002500 | Rat | n/a | region | qtl |
| 1000 | 724529 | Cm16 | Cardiac mass QTL 16 | 2.7 | heart mass (VT:0007028) | calculated heart weight (CMO:0000073) | 1 | 90804143 | 161321256 | Rat | n/a | region | qtl | |
| 1000 | 738022 | Anxrr13 | Anxiety related response QTL 13 | 4.6 | 0.00039 | locomotor behavior trait (VT:0001392) | number of 20 x 20 cm floor squares crossed into, out of or within a discrete space in an experimental apparatus (CMO:0001514) | 1 | 91093646 | 136093646 | Rat | n/a | region | qtl |
| 1000 | 1358902 | Bw47 | Body weight QTL 47 | 1.67 | body mass (VT:0001259) | body weight (CMO:0000012) | 1 | 94201400 | 197187904 | Rat | n/a | region | qtl | |
| 1000 | 724521 | Uae1 | Urinary albumin excretion QTL 1 | 3.8 | 0.0001 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 1 | 94201400 | 184846632 | Rat | n/a | region | qtl |
| 1000 | 1302788 | Scl19 | Serum cholesterol QTL 19 | 4.6 | 0.001 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 1 | 94225372 | 130917265 | Rat | n/a | region | qtl |
| 1000 | 1300153 | Bp171 | Blood pressure QTL 171 | 3.37 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 1 | 94364073 | 153076991 | Rat | n/a | region | qtl | |
| 1000 | 7411611 | Foco17 | Food consumption QTL 17 | 18.7 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 10 | 1 | 42669970 | Rat | n/a | region | qtl |
| 1000 | 10401803 | Kidm50 | Kidney mass QTL 50 | kidney mass (VT:0002707) | both kidneys wet weight (CMO:0000085) | 10 | 1 | 44902893 | Rat | n/a | region | qtl | ||
| 1000 | 631554 | Bp133 | Blood pressure QTL 133 | 0.005 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 10 | 764421 | 66221621 | Rat | n/a | region | qtl | |
| 1000 | 2298544 | Neuinf9 | Neuroinflammation QTL 9 | 4.6 | nervous system integrity trait (VT:0010566) | spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126) | 10 | 5877536 | 64401490 | Rat | n/a | region | qtl | |
| 1000 | 8662860 | Vetf10 | Vascular elastic tissue fragility QTL 10 | artery integrity trait (VT:0010639) | number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562) | 10 | 6229095 | 75983805 | Rat | n/a | region | qtl | ||
| 1000 | 61427 | Cia16 | Collagen induced arthritis QTL 16 | 3.2 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 10 | 6429075 | 99492409 | Rat | n/a | region | qtl | |
| 1000 | 1578761 | Stresp21 | Stress response QTL 21 | 3.3 | thymus mass (VT:0004954) | thymus wet weight (CMO:0000855) | 10 | 7521450 | 52521450 | Rat | n/a | region | qtl | |
| 1000 | 2303118 | Mamtr7 | Mammary tumor resistance QTL 7 | 0.003 | mammary gland integrity trait (VT:0010552) | mammary tumor growth rate (CMO:0000344) | 10 | 9841807 | 108540162 | Rat | n/a | region | qtl | |
| 1000 | 9589136 | Insul27 | Insulin level QTL 27 | 10.46 | 0.001 | blood insulin amount (VT:0001560) | plasma insulin level (CMO:0000342) | 10 | 12639513 | 57639513 | Rat | n/a | region | qtl |
| 1000 | 9590268 | Scort13 | Serum corticosterone level QTL 13 | 3.26 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 10 | 12639513 | 57639513 | Rat | n/a | region | qtl |
| 1000 | 9590310 | Scort19 | Serum corticosterone level QTL 19 | 6.3 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 10 | 12639513 | 57639513 | Rat | n/a | region | qtl |
| 1000 | 631268 | Cia21 | Collagen induced arthritis QTL 21 | 3.1 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 10 | 14827894 | 107857673 | Rat | n/a | region | qtl | |
| 1000 | 2301967 | Cm73 | Cardiac mass QTL 73 | 4.55 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 10 | 14827894 | 92423564 | Rat | n/a | region | qtl | |
| 1000 | 2316949 | Gluco60 | Glucose level QTL 60 | 3.7 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 10 | 14827894 | 110992275 | Rat | n/a | region | qtl | |
| 1000 | 1354587 | Kidm21 | Kidney mass QTL 21 | 3.3 | kidney mass (VT:0002707) | right kidney wet weight (CMO:0000082) | 10 | 15375474 | 62469074 | Rat | n/a | region | qtl | |
| 1000 | 631564 | Apr3 | Acute phase response QTL 3 | 3.9 | blood interleukin-6 amount (VT:0008595) | plasma interleukin-6 level (CMO:0001927) | 10 | 16468736 | 61468736 | Rat | n/a | region | qtl | |
| 1000 | 631532 | Cm50 | Cardiac mass QTL 50 | 6.6 | heart mass (VT:0007028) | calculated heart weight (CMO:0000073) | 10 | 18246394 | 53637634 | Rat | n/a | region | qtl | |
| 1000 | 1598852 | Anxrr19 | Anxiety related response QTL 19 | 5.07 | body movement coordination trait (VT:0005424) | number of rearing movements in an experimental apparatus (CMO:0001752) | 10 | 19402814 | 64402814 | Rat | n/a | region | qtl | |
| 1000 | 1554317 | Bmd4 | Bone mineral density QTL 4 | 9.4 | 0.0001 | lumbar vertebra mineral mass (VT:0010511) | volumetric bone mineral density (CMO:0001553) | 10 | 20170031 | 102897474 | Rat | n/a | region | qtl |
| 1000 | 70223 | Bp57 | Blood pressure QTL 57 | 5 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 10 | 21523906 | 83549467 | Rat | n/a | region | qtl | |
| 1000 | 70198 | BpQTLcluster9 | Blood pressure QTL cluster 9 | 2.94 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 10 | 21523906 | 90312401 | Rat | n/a | region | qtl | |
| 1000 | 1581497 | Esta1 | Estrogen-induced thymic atrophy QTL 1 | thymus mass (VT:0004954) | thymus wet weight (CMO:0000855) | 10 | 21707766 | 64648311 | Rat | n/a | region | qtl | ||
| 1000 | 724556 | Pur2 | Proteinuria QTL 2 | 5.5 | urine protein amount (VT:0005160) | urine protein level (CMO:0000591) | 10 | 22901497 | 93886300 | Rat | n/a | region | qtl | |
| 1000 | 1331791 | Cm31 | Cardiac mass QTL 31 | 3.84606 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 10 | 23861015 | 112626471 | Rat | n/a | region | qtl | |
| 1000 | 1331762 | Rf40 | Renal function QTL 40 | 3.873 | kidney blood vessel physiology trait (VT:0100012) | absolute change in renal vascular resistance (CMO:0001900) | 10 | 23861015 | 66539843 | Rat | n/a | region | qtl | |
| 1000 | 61325 | Aia5 | Adjuvant induced arthritis QTL 5 | 0.01 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 10 | 24483076 | 107857673 | Rat | n/a | region | qtl | |
| 1000 | 631267 | Cia20 | Collagen induced arthritis QTL 20 | 3.2 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 10 | 24483076 | 107857673 | Rat | n/a | region | qtl | |
| 1000 | 61354 | Pia10 | Pristane induced arthritis QTL 10 | 0.01 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 10 | 24483076 | 107857673 | Rat | n/a | region | qtl | |
| 1000 | 634329 | Pia15 | Pristane induced arthritis QTL 15 | 3.1 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 10 | 24884084 | 47487910 | Rat | n/a | region | qtl | |
| 1000 | 1298069 | Bp168 | Blood pressure QTL 168 | 5.5 | blood pressure trait (VT:0000183) | systolic blood pressure (CMO:0000004) | 10 | 27237530 | 101482600 | Rat | n/a | region | qtl | |
| 1000 | 631542 | Bp82 | Blood pressure QTL 82 | 6.8 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 10 | 27237530 | 102427718 | Rat | n/a | region | qtl | |
| 1000 | 70224 | Eae3 | Experimental allergic encephalomyelitis QTL 3 | 4.1 | nervous system integrity trait (VT:0010566) | experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046) | 10 | 27237530 | 64648311 | Rat | n/a | region | qtl | |
| 1000 | 2300171 | Bmd58 | Bone mineral density QTL 58 | 4.9 | 0.0001 | lumbar vertebra mineral mass (VT:0010511) | volumetric bone mineral density (CMO:0001553) | 10 | 28789280 | 73789280 | Rat | n/a | region | qtl |
| 1000 | 1600371 | Mcs21 | Mammary carcinoma susceptibility QTL 21 | 3 | mammary gland integrity trait (VT:0010552) | mammary tumor growth rate (CMO:0000344) | 10 | 30021354 | 54057745 | Rat | n/a | region | qtl | |
| 1000 | 2292441 | Bp308 | Blood pressure QTL 308 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 10 | 30099909 | 75099909 | Rat | n/a | region | qtl | ||
| 1000 | 10402859 | Bp381 | Blood pressure QTL 381 | 0.002 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 10 | 30099909 | 75099909 | Rat | n/a | region | qtl | |
| 1000 | 724527 | Bp148 | Blood pressure QTL 148 | 0.0001 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 10 | 30983805 | 75983805 | Rat | n/a | region | qtl | |
| 1000 | 1576311 | Pia26 | Pristane induced arthritis QTL 26 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 10 | 31919397 | 78343192 | Rat | n/a | region | qtl | ||
| 1000 | 1578779 | Tcas10 | Tongue tumor susceptibility QTL 10 | 3.12 | tongue integrity trait (VT:0010553) | number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) | 10 | 33179030 | 78179030 | Rat | n/a | region | qtl | |
| 1000 | 631557 | Bp136 | Blood pressure QTL 136 | 0.003 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 10 | 33343192 | 78343192 | Rat | n/a | region | qtl | |
| 1000 | 1576319 | Cia29 | Collagen induced arthritis QTL 29 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 10 | 35139424 | 80139424 | Rat | n/a | region | qtl | ||
| 1000 | 61332 | Eau3 | Experimental allergic uveoretinitis QTL 3 | 0.004 | uvea integrity trait (VT:0010551) | experimental autoimmune uveitis score (CMO:0001504) | 10 | 35669465 | 46851407 | Rat | n/a | region | qtl | |
| 1000 | 6893342 | Cm78 | Cardiac mass QTL 78 | 0.1 | 0.88 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 10 | 36185929 | 82675365 | Rat | n/a | region | qtl |
| 1000 | 631552 | Vetf2 | Vascular elastic tissue fragility QTL 2 | 4.5 | 0.0002 | aorta elastic tissue integrity trait (VT:0010556) | artery internal elastic lamina non-tumorous lesion count (CMO:0001913) | 10 | 36185929 | 95845311 | Rat | n/a | region | qtl |
| 1000 | 1354614 | Hpcl1 | Hepatic cholesterol level QTL 1 | 3.3 | liver cholesterol amount (VT:0010498) | liver cholesterol level (CMO:0001597) | 10 | 36584373 | 53645194 | Rat | n/a | region | qtl | |
| 1000 | 1358897 | Stresp6 | Stress response QTL 6 | 4.17 | 0.022 | blood norepinephrine amount (VT:0005663) | plasma norepinephrine level (CMO:0001010) | 10 | 36584373 | 66539843 | Rat | n/a | region | qtl |
| 1000 | 61441 | Btemp1 | Thermal response to stress QTL 1 | 4 | body temperature trait (VT:0005535) | core body temperature (CMO:0001036) | 10 | 36584560 | 66015527 | Rat | n/a | region | qtl | |
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