| 1000 | 1554320 | Bmd1 | Bone mineral density QTL 1 | 12.2 | 0.0001 | femur mineral mass (VT:0010011) | volumetric bone mineral density (CMO:0001553) | 1 | 509108 | 86060548 | Rat | n/a | region | qtl |
| 1000 | 1578650 | Bmd6 | Bone mineral density QTL 6 | 12.2 | | femur mineral mass (VT:0010011) | total volumetric bone mineral density (CMO:0001728) | 1 | 509108 | 43284926 | Rat | n/a | region | qtl |
| 1000 | 2313090 | Bmd69 | Bone mineral density QTL 69 | 4.4 | 0.0001 | tibia mineral mass (VT:1000283) | compact volumetric bone mineral density (CMO:0001730) | 1 | 1 | 32356093 | Rat | n/a | region | qtl |
| 1000 | 1578651 | Bmd7 | Bone mineral density QTL 7 | 14.2 | | femur mineral mass (VT:0010011) | compact volumetric bone mineral density (CMO:0001730) | 1 | 509108 | 43284926 | Rat | n/a | region | qtl |
| 1000 | 2313053 | Bss51 | Bone structure and strength QTL 51 | 3.8 | 0.0001 | tibia length (VT:0004357) | tibia length (CMO:0000450) | 1 | 1 | 32356093 | Rat | n/a | region | qtl |
| 1000 | 2313070 | Bss52 | Bone structure and strength QTL 52 | 4.4 | 0.0001 | body length (VT:0001256) | body length (CMO:0000013) | 1 | 1 | 32356093 | Rat | n/a | region | qtl |
| 1000 | 1578669 | Bss9 | Bone structure and strength QTL 9 | 6.3 | | femur morphology trait (VT:0000559) | bone trabecular cross-sectional area (CMO:0002311) | 1 | 509108 | 43284926 | Rat | n/a | region | qtl |
| 1000 | 1354647 | Despr8 | Despair related QTL 8 | | 0.0000341 | locomotor behavior trait (VT:0001392) | amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) | 1 | 1 | 24744506 | Rat | n/a | region | qtl |
| 1000 | 1600360 | Mcs16 | Mammary carcinoma susceptibility QTL 16 | 2.4 | | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 1 | 2244390 | 43433040 | Rat | n/a | region | qtl |
| 1000 | 2298546 | Neuinf4 | Neuroinflammation QTL 4 | 5.1 | | nervous system integrity trait (VT:0010566) | spinal cord RT1-B protein level (CMO:0002132) | 1 | 1 | 28736750 | Rat | n/a | region | qtl |
| 1000 | 738020 | Pia8 | Pristane induced arthritis QTL 8 | 4.7 | | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 1 | 1 | 65833076 | Rat | n/a | region | qtl |