| 1000 | 1357481 | Aaj2_m | anxiety in A/J 2 (mouse) | | | Not determined | | 6 | 4503823 | 48703611 | Mouse | n/a | region | qtl |
| 1000 | 1357520 | Axtq2_m | anxiety QTL 2 (mouse) | | | Not determined | | 6 | 4503823 | 48703611 | Mouse | n/a | region | qtl |
| 1000 | 11353836 | Bmiq1_m | body mass index QTL 1 (mouse) | | | | | 6 | 4503823 | 29751333 | Mouse | n/a | region | qtl |
| 1000 | 11353840 | Bmiq2_m | body mass index QTL 2 (mouse) | | | | | 6 | 4503823 | 45291115 | Mouse | n/a | region | qtl |
| 1000 | 11353841 | Bmiq3_m | body mass index QTL 3 (mouse) | | | | | 6 | 4503823 | 48703611 | Mouse | n/a | region | qtl |
| 1000 | 13208564 | Bmiq7_m | body mass index QTL 7 (mouse) | | | | | 6 | 24999999 | 79976983 | Mouse | n/a | region | qtl |
| 1000 | 1301998 | Bts2_m | bladder tumor susceptibility 2 (mouse) | | | Not determined | | 6 | 12751221 | 46751333 | Mouse | n/a | region | qtl |
| 1000 | 26884414 | Bzwq12_m | bi-zygomatic width QTL 12, 16 week (mouse) | | | | | 6 | 3400000 | 139076998 | Mouse | n/a | region | qtl |
| 1000 | 14700690 | Ccs6_m | colon cancer susceptibility 6 (mouse) | | | | | 6 | 23776934 | 57776934 | Mouse | n/a | region | qtl |
| 1000 | 1301131 | Chol2_m | cholesterol 2 (mouse) | | | Not determined | | 6 | 1 | 32144495 | Mouse | n/a | region | qtl |
| 1000 | 1300556 | Cia6_m | collagen induced arthritis QTL 6 (mouse) | | | Not determined | | 6 | 4464884 | 87403016 | Mouse | n/a | region | qtl |
| 1000 | 10043869 | Cia6a_m | collagen induced arthritis QTL 6a (mouse) | | | Not determined | | 6 | 12117971 | 46118069 | Mouse | n/a | region | qtl |
| 1000 | 1357442 | Dbts1_m | diabetes 1 (mouse) | | | Not determined | | 6 | 18234147 | 73364675 | Mouse | n/a | region | qtl |
| 1000 | 10412107 | Desp4_m | despair 4 (mouse) | | | Not determined | | 6 | 20049830 | 54049830 | Mouse | n/a | region | qtl |
| 1000 | 12904940 | Edlmmq5_m | extensor digitorum longus muscle mass QTL 5 (mouse) | | | | | 6 | 19616346 | 53616346 | Mouse | n/a | region | qtl |
| 1000 | 4142271 | Egq8_m | early growth QTL 8 (mouse) | | | Not determined | | | 4503823 | 96633110 | Mouse | n/a | region | qtl |
| 1000 | 1301850 | Fglu_m | fasting glucose (mouse) | | | Not determined | | 6 | 17711598 | 51711719 | Mouse | n/a | region | qtl |
| 1000 | 12904952 | Gmmq4_m | gastrocnemius muscle mass QTL 4 (mouse) | | | | | 6 | 19616346 | 53616346 | Mouse | n/a | region | qtl |
| 1000 | 25440480 | Moaq2_m | modifier of alien QTL 2 (mouse) | | | | | 6 | 3050001 | 117476961 | Mouse | n/a | region | qtl |
| 1000 | 5491191 | Mobq2_m | multigenic obesity QTL 2 (mouse) | | | Not determined | | 6 | 1 | 32144495 | Mouse | n/a | region | qtl |
| 1000 | 15039372 | Nmrs22_m | NAFLD-associated magnetic resonance shift 22 (mouse) | | | | | 6 | 1476334 | 35476334 | Mouse | n/a | region | qtl |
| 1000 | 4141749 | Obrq2_m | obesity resistance QTL 2 (mouse) | | | Not determined | | | 12751221 | 46751333 | Mouse | n/a | region | qtl |
| 1000 | 4141988 | Obrq3_m | obesity resistance QTL 3 (mouse) | | | Not determined | | | 28290993 | 62291115 | Mouse | n/a | region | qtl |
| 1000 | 1301724 | Pcd4ts1_m | p-glycoprotein positive CD4 T cell subset 1 (mouse) | | | Not determined | | 6 | 17711598 | 51711719 | Mouse | n/a | region | qtl |
| 1000 | 26884441 | Sklq3_m | skull length QTL 3, 5 week (mouse) | | | | | 6 | 7600000 | 80576983 | Mouse | n/a | region | qtl |
| 1000 | 1302024 | Skull7_m | skull morphology 7 (mouse) | | | Not determined | | 6 | 1 | 32144495 | Mouse | n/a | region | qtl |
| 1000 | 1302051 | Sluc7_m | susceptibility to lung cancer 7 (mouse) | | | Not determined | | 6 | 9297074 | 43297168 | Mouse | n/a | region | qtl |
| 1000 | 1300731 | Smdq3_m | segregation of mitochondrial DNA QTL 3 (mouse) | | | Not determined | | 6 | 4249206 | 38249325 | Mouse | n/a | region | qtl |
| 1000 | 4140989 | Spqq2_m | sperm quality QTL 2 (mouse) | | | Not determined | | | 17711598 | 51711719 | Mouse | n/a | region | qtl |
| 1000 | 10412213 | Sxbq2_m | SGC/Knj cross B6 QTL 2 (mouse) | | | Not determined | | 6 | 19912685 | 71299759 | Mouse | n/a | region | qtl |
| 1000 | 12904943 | Tammq4_m | tibialis anterior muscle mass QTL 4 (mouse) | | | | | 6 | 19616346 | 53616346 | Mouse | n/a | region | qtl |
| 1000 | 27226726 | Tibmd7_m | tibia midshaft diameter 7, 16 week (mouse) | | | | | 6 | 17699999 | 53476985 | Mouse | n/a | region | qtl |
| 1000 | 4142361 | W10q11_m | weight 10 weeks QTL 11 (mouse) | | | Not determined | | | 4503823 | 96633110 | Mouse | n/a | region | qtl |
| 1000 | 4142126 | W3q3_m | weight 3 weeks QTL 3 (mouse) | | | Not determined | | | 4503823 | 96633110 | Mouse | n/a | region | qtl |
| 1000 | 4142232 | W6q4_m | weight 6 weeks QTL 4 (mouse) | | | Not determined | | | 4503823 | 96633110 | Mouse | n/a | region | qtl |