| 1000 | 1301048 | Actre2_m | activity response to ethanol 2 (mouse) | | | Not determined | | 2 | 63005954 | 97006113 | Mouse | n/a | region | qtl |
| 1000 | 4141406 | Alpq2_m | alcohol preference QTL 2 (mouse) | | | Not determined | | 2 | 57524117 | 91524288 | Mouse | n/a | region | qtl |
| 1000 | 1301703 | Bomd3_m | bone mineral density 3 (mouse) | | | Not determined | | 2 | 63005954 | 97006113 | Mouse | n/a | region | qtl |
| 1000 | 10043894 | Bw22_m | body weight QTL 22 (mouse) | | | Not determined | | 2 | 80895334 | 114895334 | Mouse | n/a | region | qtl |
| 1000 | 1301374 | Cplaq7_m | circadian period of locomotor activity 7 (mouse) | | | Not determined | | 2 | 76421483 | 110421651 | Mouse | n/a | region | qtl |
| 1000 | 1301109 | Dntcs2_m | dental caries susceptibility 2 (mouse) | | | Not determined | | 2 | 40885493 | 114910165 | Mouse | n/a | region | qtl |
| 1000 | 1302174 | Dssc2_m | dextran sodium sulfate induced colitis QTL2 (mouse) | | | Not determined | | 2 | 24224632 | 148700377 | Mouse | n/a | region | qtl |
| 1000 | 1558899 | Egq1_m | early growth QTL 1 (mouse) | | | Not determined | | 2 | 20897778 | 118894840 | Mouse | n/a | region | qtl |
| 1000 | 15092054 | Egrme5_m | early growth rate, maternal effect 5 (mouse) | | | | | 2 | 82190187 | 118004745 | Mouse | n/a | region | qtl |
| 1000 | 1301948 | Elsgp3_m | elevated serum gp70 3 (mouse) | | | Not determined | | 2 | 68724269 | 102724407 | Mouse | n/a | region | qtl |
| 1000 | 1357881 | Estoq1_m | embryo survival total QTL 1 (mouse) | | | Not determined | | 2 | 20897778 | 118894840 | Mouse | n/a | region | qtl |
| 1000 | 1301882 | Etohc2_m | ethanol consumption 2 (mouse) | | | Not determined | | 2 | 68724269 | 102724407 | Mouse | n/a | region | qtl |
| 1000 | 1300662 | Etohila_m | ethanol induced locomotor activity (mouse) | | | Not determined | | 2 | 63005954 | 97006113 | Mouse | n/a | region | qtl |
| 1000 | 1301405 | Etohr_m | ethanol response acute (mouse) | | | Not determined | | 2 | 63005954 | 97006113 | Mouse | n/a | region | qtl |
| 1000 | 13464141 | Hbbcq3_m | hemoglobin concentration QTL 3 (mouse) | | | | | 2 | 52448019 | 86448136 | Mouse | n/a | region | qtl |
| 1000 | 4141236 | Hbnr5_m | Heligmosomoides bakeri nematode resistance 5 (mouse) | | | Not determined | | | 31214567 | 105143570 | Mouse | n/a | region | qtl |
| 1000 | 13463471 | Hctq6_m | hematocrit QTL 6 (mouse) | | | | | 2 | 52448019 | 86448136 | Mouse | n/a | region | qtl |
| 1000 | 10044002 | Hdl7_m | HDL level 7 (mouse) | | | Not determined | | 2 | 63005954 | 97006113 | Mouse | n/a | region | qtl |
| 1000 | 1357681 | Hrtq1_m | heart weight QTL 1 (mouse) | | | Not determined | | 2 | 20897778 | 118894840 | Mouse | n/a | region | qtl |
| 1000 | 1301873 | Hsl1_m | hyperoxia susceptibility locus 1 (mouse) | | | Not determined | | 2 | 63570154 | 97570301 | Mouse | n/a | region | qtl |
| 1000 | 10412082 | Hylaq1_m | Hyperlocomotor activity related QTL 1 (mouse) | | | Not determined | | 2 | 84013198 | 148667470 | Mouse | n/a | region | qtl |
| 1000 | 1301660 | Iba1_m | induction of brown adipocytes 1 (mouse) | | | Not determined | | 2 | 67647887 | 101648142 | Mouse | n/a | region | qtl |
| 1000 | 1357454 | Kidq1_m | kidney weight QTL 1 (mouse) | | | Not determined | | 2 | 20897778 | 118894840 | Mouse | n/a | region | qtl |
| 1000 | 12738429 | Lfibq18_m | liver fibrosis QTL 18 (mouse) | | | | | 2 | 57919991 | 91919991 | Mouse | n/a | region | qtl |
| 1000 | 1301344 | Lith1_m | lithogenic gene 1 (mouse) | | | Not determined | | 2 | 45347635 | 145312647 | Mouse | n/a | region | qtl |
| 1000 | 10053681 | Lith24_m | lithogenic gene 24 (mouse) | | | Not determined | | 2 | 63005954 | 97006113 | Mouse | n/a | region | qtl |
| 1000 | 39128209 | Lwq14_m | liver weight QTL 14 (mouse) | | | | | 2 | 20897778 | 118894840 | Mouse | n/a | region | qtl |
| 1000 | 13463482 | Mchq17_m | mean corpuscular hemoglobin QTL 17 (mouse) | | | | | 2 | 67647887 | 101648142 | Mouse | n/a | region | qtl |
| 1000 | 5491197 | Mobq5_m | multigenic obesity QTL 5 (mouse) | | | Not determined | | 2 | 65269746 | 162518926 | Mouse | n/a | region | qtl |
| 1000 | 5491196 | Mobq6_m | multigenic obesity QTL 6 (mouse) | | | Not determined | | 2 | 85724269 | 180896594 | Mouse | n/a | region | qtl |
| 1000 | 4141657 | Mohg1_m | modifier of hg 1 (mouse) | | | Not determined | | 2 | 76678758 | 103095823 | Mouse | n/a | region | qtl |
| 1000 | 1301769 | Orgwq2_m | organ weight QTL 2 (mouse) | | | Not determined | | 2 | 3887126 | 93421651 | Mouse | n/a | region | qtl |
| 1000 | 4142088 | Parms1_m | patched associated RMS 1 (mouse) | | | Not determined | | | 74524117 | 114123532 | Mouse | n/a | region | qtl |
| 1000 | 4141155 | Plast2b_m | plasma plant sterol 2b (mouse) | | | Not determined | | 2 | 84013198 | 148522175 | Mouse | n/a | region | qtl |
| 1000 | 1301897 | Scc2_m | colon tumor susceptibility 2 (mouse) | | | Not determined | | 2 | 85724269 | 90410991 | Mouse | n/a | region | qtl |
| 1000 | 1558901 | Skmw8_m | skeletal muscle weight 8 (mouse) | | | Not determined | | 2 | 84008488 | 118008593 | Mouse | n/a | region | qtl |
| 1000 | 11528549 | Sluc31_m | susceptibility to lung cancer 31 (mouse) | | | | | 2 | 74524117 | 129213005 | Mouse | n/a | region | qtl |
| 1000 | 1357436 | Splq1_m | spleen weight QTL 1 (mouse) | | | Not determined | | 2 | 20897778 | 118894840 | Mouse | n/a | region | qtl |
| 1000 | 4141854 | T2dm2sa_m | type 2 diabetes mellitus 2 in SMXA RI mice (mouse) | | | Not determined | | 2 | 29307947 | 148374934 | Mouse | n/a | region | qtl |
| 1000 | 1357577 | Trmq3_m | T cell ratio modifier QTL 3 (mouse) | | | Not determined | | 2 | 60520612 | 119355518 | Mouse | n/a | region | qtl |
| 1000 | 13824983 | Vclq1_m | curvilinear velocity QTL 1 (mouse) | | | | | 2 | 61830344 | 136841920 | Mouse | n/a | region | qtl |
| 1000 | 1558966 | W10q9_m | weight 10 weeks QTL 9 (mouse) | | | Not determined | | 2 | 20897778 | 118894840 | Mouse | n/a | region | qtl |
| 1000 | 1558915 | W3q1_m | weight 3 weeks QTL 1 (mouse) | | | Not determined | | 2 | 20897778 | 118894840 | Mouse | n/a | region | qtl |
| 1000 | 1558738 | W6q1_m | weight 6 weeks QTL 1 (mouse) | | | Not determined | | 2 | 20897778 | 118894840 | Mouse | n/a | region | qtl |