| 1000 | 1641905 | Colcr1 | Colorectal carcinoma resistance QTL 1 | 4.3 | 0.0003 | intestine integrity trait (VT:0010554) | benign colorectal tumor surface area measurement (CMO:0001799) | 4 | 1 | 26654881 | Rat | n/a | region | qtl |
| 1000 | 61333 | Gluco16 | Glucose level QTL 16 | 4.3 | 0.00001 | adipocyte glucose uptake trait (VT:0004185) | absolute change in adipocyte glucose uptake (CMO:0000873) | 4 | 1 | 26803291 | Rat | n/a | region | qtl |
| 1000 | 1357343 | Gluco4 | Glucose level QTL 4 | | 0.00002 | adipocyte glucose uptake trait (VT:0004185) | adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874) | 4 | 1 | 29778604 | Rat | n/a | region | qtl |
| 1000 | 634323 | Hc2 | Hypercalciuria QTL 2 | 2.15 | | urine calcium amount (VT:0002985) | urine calcium excretion rate (CMO:0000763) | 4 | 1 | 42118977 | Rat | n/a | region | qtl |
| 1000 | 738021 | Hcar13 | Hepatocarcinoma resistance QTL 13 | 4.3 | | liver integrity trait (VT:0010547) | liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464) | 4 | 1 | 31554484 | Rat | n/a | region | qtl |
| 1000 | 8552903 | Pigfal2 | Plasma insulin-like growth factor 1 level QTL 2 | 7.3 | | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 4 | 1 | 28352196 | Rat | n/a | region | qtl |
| 1000 | 724557 | Plsm1 | Polydactyly-luxate syndrome (PLS) morphotypes QTL 1 | | 0.0003 | forelimb integrity trait (VT:0010562) | front foot phalanges count (CMO:0001947) | 4 | 1 | 25545519 | Rat | n/a | region | qtl |
| 1000 | 9589046 | Scfw2 | Subcutaneous fat weight QTL 2 | 5.54 | 0.001 | subcutaneous adipose mass (VT:1000472) | abdominal subcutaneous fat pad weight (CMO:0002069) | 4 | 1 | 28352196 | Rat | n/a | region | qtl |
| 1000 | 61408 | Scl23 | Serum cholesterol level QTL 23 | | 0.0005 | blood HDL phospholipid amount (VT:0010504) | serum high density lipoprotein phospholipid level (CMO:0001567) | 4 | 1 | 25545519 | Rat | n/a | region | qtl |
| 1000 | 9590100 | Sffal4 | Serum free fatty acids level QTL 4 | 7.36 | 0.05 | blood free fatty acid amount (VT:0001553) | plasma free fatty acids level (CMO:0000546) | 4 | 1 | 28352196 | Rat | n/a | region | qtl |
| 1000 | 9589097 | Slep11 | Serum leptin concentration QTL 11 | 5.09 | 0.001 | blood leptin amount (VT:0005667) | plasma leptin level (CMO:0000781) | 4 | 1 | 28352196 | Rat | n/a | region | qtl |