| 1000 | 1301506 | Aevm1_m | autoimmune extremity vasculitis in MRL mice 1 (mouse) | | | Not determined | | 8 | 54287817 | 88287993 | Mouse | n/a | region | qtl |
| 1000 | 4141358 | Ath22_m | atherosclerosis 22 (mouse) | | | Not determined | | | 3464566 | 37464566 | Mouse | n/a | region | qtl |
| 1000 | 1300953 | Bdt5_m | bone density traits 5 (mouse) | | | Not determined | | 15 | 1 | 20460347 | Mouse | n/a | region | qtl |
| 1000 | 4140967 | Bmd39_m | bone mineral density 39 (mouse) | | | Not determined | | 8 | 32016544 | 117238700 | Mouse | n/a | region | qtl |
| 1000 | 11062069 | Bpq31_m | blood pressure QTL 31 (mouse) | | | | | 15 | 1 | 26273109 | Mouse | n/a | region | qtl |
| 1000 | 26884412 | Bzwq10_m | bi-zygomatic width QTL 10, 10 week (mouse) | | | | | 15 | 6100000 | 71600000 | Mouse | n/a | region | qtl |
| 1000 | 26884409 | Bzwq16_m | bi-zygomatic width QTL 16, 16 week (mouse) | | | | | 15 | 6100000 | 38000000 | Mouse | n/a | region | qtl |
| 1000 | 26884417 | Bzwq4_m | bi-zygomatic width QTL 4, 5 week (mouse) | | | | | 15 | 6100000 | 72600000 | Mouse | n/a | region | qtl |
| 1000 | 1301013 | Capsq4_m | capsaicin sensitivity related QTL 4 (mouse) | | | Not determined | | 8 | 36163000 | 92728652 | Mouse | n/a | region | qtl |
| 1000 | 12904744 | Carcdq1_m | cardiac collagen deposition QTL 1 (mouse) | | | | | 8 | 39709256 | 94689598 | Mouse | n/a | region | qtl |
| 1000 | 10412287 | Carg3_m | Candida albicans resistance gene 3 (mouse) | | | Not determined | | 8 | 55545028 | 89545028 | Mouse | n/a | region | qtl |
| 1000 | 1301099 | Cbm2_m | cerebellum weight 2 (mouse) | | | Not determined | | 8 | 78518613 | 112518703 | Mouse | n/a | region | qtl |
| 1000 | 1301872 | Cd4ts3_m | CD4 T cell subset 3 (mouse) | | | Not determined | | 8 | 71396181 | 105396393 | Mouse | n/a | region | qtl |
| 1000 | 12904012 | Cfq10_m | conditioned fear QTL 10 (mouse) | | | | | 8 | 80066775 | 89014359 | Mouse | n/a | region | qtl |
| 1000 | 1301581 | Char2_m | P. chabaudi malaria resistance QTL 2 (mouse) | | | Not determined | | 8 | 79082178 | 113082403 | Mouse | n/a | region | qtl |
| 1000 | 4141395 | Char2a_m | P. chabaudi malaria resistance QTL 2a (mouse) | | | Not determined | | | 71136783 | 90202598 | Mouse | n/a | region | qtl |
| 1000 | 14700686 | Civq3_m | cerebral infarct volume QTL 3 (mouse) | | | | | 8 | 51882191 | 85882191 | Mouse | n/a | region | qtl |
| 1000 | 1302121 | Cliff_m | cliff drop aversion (mouse) | | | Not determined | | 15 | 1 | 20460347 | Mouse | n/a | region | qtl |
| 1000 | 1301766 | Desp1_m | despair 1 (mouse) | | | Not determined | | 8 | 84759576 | 118759741 | Mouse | n/a | region | qtl |
| 1000 | 1300594 | Eae2_m | susceptibility to experimental allergic encephalomyelitis 2 (mouse) | | | Not determined | | 15 | 1 | 31218650 | Mouse | n/a | region | qtl |
| 1000 | 1558875 | Eae31_m | experimental allergic encephalomyelitis susceptibility 31 (mouse) | | | Not determined | | 8 | 34642776 | 114837007 | Mouse | n/a | region | qtl |
| 1000 | 1357659 | Epfpq4_m | epididymal fat percentage QTL 4 (mouse) | | | Not determined | | 15 | 3460212 | 78717086 | Mouse | n/a | region | qtl |
| 1000 | 1301662 | Faq8_m | fluctuating asymmetry QTL 8 (mouse) | | | Not determined | | 15 | 1 | 20460347 | Mouse | n/a | region | qtl |
| 1000 | 1301767 | Fcsa2_m | femoral cross-sectional area 2 (mouse) | | | Not determined | | 8 | 70305375 | 104305495 | Mouse | n/a | region | qtl |
| 1000 | 27226754 | Femd6_m | femur midshaft diameter 6, 10 week (mouse) | | | | | 8 | 37400000 | 109600000 | Mouse | n/a | region | qtl |
| 1000 | 27226786 | Feml11_m | femur length 11, 5 week (mouse) | | | | | 15 | 6100000 | 76000000 | Mouse | n/a | region | qtl |
| 1000 | 27226759 | Feml17_m | femur length 17, 10 week (mouse) | | | | | 15 | 7600000 | 55400000 | Mouse | n/a | region | qtl |
| 1000 | 27226755 | Feml22_m | femur length 22, 16 week (mouse) | | | | | 15 | 7600000 | 59400000 | Mouse | n/a | region | qtl |
| 1000 | 4141446 | Ffaq4_m | free fatty acid QTL 4 (mouse) | | | Not determined | | | 1 | 27101304 | Mouse | n/a | region | qtl |
| 1000 | 11353828 | Gf7_m | gonadal fat pad weight 7 (mouse) | | | | | 8 | 58201479 | 92201479 | Mouse | n/a | region | qtl |
| 1000 | 10412172 | Habiir5_m | hyperoxic acute lung injury imprinted region 5 (mouse) | | | Not determined | | 15 | 9272936 | 43448484 | Mouse | n/a | region | qtl |
| 1000 | 10043992 | Hbnr11_m | Heligmosomoides bakeri nematode resistance 11 (mouse) | | | Not determined | | 8 | 65600207 | 99600347 | Mouse | n/a | region | qtl |
| 1000 | 1301874 | Hdlq16_m | HDL QTL 16 (mouse) | | | Not determined | | 8 | 75685348 | 109685497 | Mouse | n/a | region | qtl |
| 1000 | 1558780 | Idd22_m | insulin dependent diabetes susceptibility 22 (mouse) | | | Not determined | | 8 | 71102903 | 105103009 | Mouse | n/a | region | qtl |
| 1000 | 1301952 | Im3_m | immunoregulatory 3 (mouse) | | | Not determined | | 8 | 54706614 | 88706763 | Mouse | n/a | region | qtl |
| 1000 | 4142283 | Imraq2_m | immune response to AAV2 QTL 2 (mouse) | | | Not determined | | 8 | 70305375 | 104305495 | Mouse | n/a | region | qtl |
| 1000 | 1558890 | Lith18_m | lithogenic gene 18 (mouse) | | | Not determined | | 8 | 75675517 | 109675623 | Mouse | n/a | region | qtl |
| 1000 | 5491193 | Mobq4_m | multigenic obesity QTL 4 (mouse) | | | Not determined | | 15 | 1 | 20460347 | Mouse | n/a | region | qtl |
| 1000 | 11252136 | Modvl4_m | modifier of vacuolated lens (mouse) | | | | | 15 | 5620408 | 39620528 | Mouse | n/a | region | qtl |
| 1000 | 10412234 | Nhdlq14_m | non-HDL QTL 14 (mouse) | | | Not determined | | 8 | 75685348 | 109685497 | Mouse | n/a | region | qtl |
| 1000 | 1301808 | Nhdlq1_m | non-HDL QTL 1 (mouse) | | | Not determined | | 8 | 75685348 | 109685497 | Mouse | n/a | region | qtl |
| 1000 | 1357459 | Nhdlq7_m | non-HDL QTL 7 (mouse) | | | Not determined | | 15 | 1 | 20460347 | Mouse | n/a | region | qtl |
| 1000 | 1357470 | Obq16_m | obesity QTL 16 (mouse) | | | Not determined | | 8 | 75685348 | 109685497 | Mouse | n/a | region | qtl |
| 1000 | 10043975 | Obq31_m | obesity QTL 31 (mouse) | | | Not determined | | 8 | 58409776 | 92409776 | Mouse | n/a | region | qtl |
| 1000 | 1301688 | Orch6_m | autoimmune orchitis resistance 6 (mouse) | | | Not determined | | 8 | 60786850 | 94786976 | Mouse | n/a | region | qtl |
| 1000 | 1357708 | Orq1_m | ovulation rate QTL 1 (mouse) | | | Not determined | | 8 | 71287817 | 123895615 | Mouse | n/a | region | qtl |
| 1000 | 1301136 | Pgia8_m | proteoglycan induced arthritis 8 (mouse) | | | Not determined | | 15 | 3210685 | 24388090 | Mouse | n/a | region | qtl |
| 1000 | 27095922 | Pglq11_m | pelvic girdle length QTL 11, 10 week (mouse) | | | | | 15 | 8100000 | 38900000 | Mouse | n/a | region | qtl |
| 1000 | 27095912 | Pglq14_m | pelvic girdle length QTL 14, 16 week (mouse) | | | | | 8 | 73400000 | 126100000 | Mouse | n/a | region | qtl |
| 1000 | 1300920 | Pitm3_m | prion incubation time 3 (mouse) | | | Not determined | | 8 | 73202495 | 107202598 | Mouse | n/a | region | qtl |
| 1000 | 1301433 | Rapop5_m | radiation-induced apoptosis 5 (mouse) | | | Not determined | | 15 | 9272936 | 79590561 | Mouse | n/a | region | qtl |
| 1000 | 1357559 | Scfq2_m | subcutaneous fat pad weight QTL 2 (mouse) | | | Not determined | | 15 | 3460212 | 78717086 | Mouse | n/a | region | qtl |
| 1000 | 4140994 | Shali3_m | survival time to hyperoxic acute lung injury 3 (mouse) | | | Not determined | | | 9272936 | 43448484 | Mouse | n/a | region | qtl |
| 1000 | 10401902 | Sicd2_m | seizure-induced cell death 2 (mouse) | | | Not determined | | 15 | 3444907 | 71325689 | Mouse | n/a | region | qtl |
| 1000 | 26884439 | Sklq11_m | skull length QTL 11, 10 week (mouse) | | | | | 15 | 8100000 | 47800000 | Mouse | n/a | region | qtl |
| 1000 | 26884442 | Sklq6_m | skull length QTL 6, 5 week (mouse) | | | | | 15 | 6100000 | 100900000 | Mouse | n/a | region | qtl |
| 1000 | 4141797 | Skmw16_m | skeletal muscle weight 16 (mouse) | | | Not determined | | 8 | 63939547 | 97939696 | Mouse | n/a | region | qtl |
| 1000 | 26884384 | Skwq12_m | skull length QTL 12, 16 week (mouse) | | | | | 15 | 6100000 | 50900000 | Mouse | n/a | region | qtl |
| 1000 | 26884387 | Skwq8_m | skull length QTL 8, 10 week (mouse) | | | | | 15 | 6100000 | 68400000 | Mouse | n/a | region | qtl |
| 1000 | 1301023 | Sluc24_m | susceptibility to lung cancer 24 (mouse) | | | Not determined | | 15 | 1 | 20460347 | Mouse | n/a | region | qtl |
| 1000 | 4141192 | Ssrq2_m | stress response QTL 2 (mouse) | | | Not determined | | | 9272936 | 56323454 | Mouse | n/a | region | qtl |
| 1000 | 4142252 | Tailaq4_m | tail length adjusted QTL 4 (mouse) | | | Not determined | | | 3460212 | 78717086 | Mouse | n/a | region | qtl |
| 1000 | 4142448 | Tailq6_m | tail length QTL 6 (mouse) | | | Not determined | | | 3460212 | 78717086 | Mouse | n/a | region | qtl |
| 1000 | 4141541 | Tglq3_m | triglyceride QTL 3 (mouse) | | | Not determined | | 15 | 1 | 20460347 | Mouse | n/a | region | qtl |
| 1000 | 4141285 | Tgq18_m | triglyceride QTL 18 (mouse) | | | Not determined | | | 63460107 | 97460107 | Mouse | n/a | region | qtl |
| 1000 | 27226773 | Tibl16_m | tibia length 16, 10 week (mouse) | | | | | 15 | 6900000 | 76000000 | Mouse | n/a | region | qtl |
| 1000 | 27226777 | Tibl8_m | tibia length 8, 5 week (mouse) | | | | | 15 | 6900000 | 84700000 | Mouse | n/a | region | qtl |
| 1000 | 27226734 | Tibmd5_m | tibia midshaft diameter 5, 10 week (mouse) | | | | | 15 | 6100000 | 86800000 | Mouse | n/a | region | qtl |
| 1000 | 27226717 | Tibw4_m | tibia width 4, proximal, 10 week (mouse) | | | | | 15 | 6100000 | 78800000 | Mouse | n/a | region | qtl |
| 1000 | 27226721 | Tibw8_m | tibia width 8, proximal, 16 week (mouse) | | | | | 15 | 6900000 | 76000000 | Mouse | n/a | region | qtl |
| 1000 | 27095932 | Ulnl11_m | ulna length 11, 16 week (mouse) | | | | | 15 | 6100000 | 76500000 | Mouse | n/a | region | qtl |
| 1000 | 27095940 | Ulnl8_m | ulna length 8, 10 week (mouse) | | | | | 15 | 7200000 | 55400000 | Mouse | n/a | region | qtl |
| 1000 | 1357787 | Vtbt5_m | vertebral trabecular bone trait 5 (mouse) | | | Not determined | | 8 | 65357768 | 99357920 | Mouse | n/a | region | qtl |
| 1000 | 4142023 | W3q5_m | weight 3 weeks QTL 5 (mouse) | | | Not determined | | | 71287817 | 123895615 | Mouse | n/a | region | qtl |
| 1000 | 4141952 | W3q7_m | weight 3 weeks QTL 7 (mouse) | | | Not determined | | | 3460212 | 78717086 | Mouse | n/a | region | qtl |
| 1000 | 10755519 | Wbc1_m | white blood cell count 1 (mouse) | | | | | 8 | 81619151 | 115619151 | Mouse | n/a | region | qtl |
| 1000 | 10755530 | Wbc2_m | white blood cell count 2 (mouse) | | | | | 8 | 81092664 | 115092664 | Mouse | n/a | region | qtl |
| 1000 | 26884429 | Zlq6_m | zygomatic length QTL 6, 10 week (mouse) | | | | | 15 | 6800000 | 45100000 | Mouse | n/a | region | qtl |