| 1000 | 2317051 | Aia18 | Adjuvant induced arthritis QTL 18 | 2.42 | | joint integrity trait (VT:0010548) | left rear ankle joint diameter (CMO:0002149) | 8 | 8736635 | 53736635 | Rat | n/a | region | qtl |
| 1000 | 12880044 | Am9 | Aortic mass QTL 9 | | 0.007 | aorta mass (VT:0002845) | aorta weight to aorta length to body weight ratio (CMO:0002722) | 8 | 2097640 | 47097640 | Rat | n/a | region | qtl |
| 1000 | 1358896 | Bp262 | Blood pressure QTL 262 | 2.89 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 8 | 27205715 | 99103503 | Rat | n/a | region | qtl |
| 1000 | 1359021 | Bp271 | Blood pressure QTL 271 | 1.8 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 8 | 26644912 | 46711092 | Rat | n/a | region | qtl |
| 1000 | 2301416 | Bp315 | Blood pressure QTL 315 | | 0.008 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 8 | 7670578 | 52670578 | Rat | n/a | region | qtl |
| 1000 | 12880023 | Bw184 | Body weight QTL 184 | | 0.001 | body mass (VT:0001259) | body weight (CMO:0000012) | 8 | 2097640 | 47097640 | Rat | n/a | region | qtl |
| 1000 | 12880025 | Cm102 | Cardiac mass QTL 102 | | 0.044 | heart mass (VT:0007028) | heart wet weight to body weight ratio (CMO:0002408) | 8 | 2097640 | 47097640 | Rat | n/a | region | qtl |
| 1000 | 12880028 | Cm103 | Cardiac mass QTL 103 | | 0.02 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 8 | 2097640 | 47097640 | Rat | n/a | region | qtl |
| 1000 | 1331804 | Cm30 | Cardiac mass QTL 30 | 3.77443 | | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 8 | 28242912 | 53961020 | Rat | n/a | region | qtl |
| 1000 | 1358907 | Cm40 | Cardiac mass QTL 40 | 1.89 | | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 8 | 27205715 | 99103503 | Rat | n/a | region | qtl |
| 1000 | 1354627 | Despr14 | Despair related QTL 14 | | 0.0056 | locomotor behavior trait (VT:0001392) | amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) | 8 | 7688955 | 52688955 | Rat | n/a | region | qtl |
| 1000 | 1354595 | Despr4 | Despair related QTL 4 | 2.16 | 0.0036 | locomotor behavior trait (VT:0001392) | amount of time spent in voluntary immobility (CMO:0001043) | 8 | 7688955 | 52688955 | Rat | n/a | region | qtl |
| 1000 | 1581557 | Eae16 | Experimental allergic encephalomyelitis QTL 16 | 3.8 | | nervous system integrity trait (VT:0010566) | experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046) | 8 | 8462195 | 110921472 | Rat | n/a | region | qtl |
| 1000 | 2317048 | Ginf1 | Gastrointestinal inflammation QTL 1 | 3.52 | 0.005 | cecum mucosa thickness (VT:0010234) | enterocolitis severity score (CMO:0002138) | 8 | 4705810 | 49705810 | Rat | n/a | region | qtl |
| 1000 | 2317032 | Ginf2 | Gastrointestinal inflammation QTL 2 | 3.21 | 0.005 | liver integrity trait (VT:0010547) | liver granuloma severity score (CMO:0002157) | 8 | 4705810 | 49705810 | Rat | n/a | region | qtl |
| 1000 | 2302278 | Gluco36 | Glucose level QTL 36 | 4.2 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 8 | 29502665 | 50095447 | Rat | n/a | region | qtl |
| 1000 | 2303564 | Gluco43 | Glucose level QTL 43 | 3 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 8 | 26130187 | 71130187 | Rat | n/a | region | qtl |
| 1000 | 631842 | Inf1 | Infertility severity QTL 1 | 4.1 | 0.001 | seminal gland mass (VT:0010524) | seminal vesicle wet weight (CMO:0001603) | 8 | 22662330 | 67662330 | Rat | n/a | region | qtl |
| 1000 | 2303572 | Insul13 | Insulin level QTL 13 | 2 | | blood insulin amount (VT:0001560) | blood insulin level (CMO:0000349) | 8 | 26130187 | 71130187 | Rat | n/a | region | qtl |
| 1000 | 1358892 | Kidm26 | Kidney mass QTL 26 | 3.69 | | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 8 | 27205715 | 99103503 | Rat | n/a | region | qtl |
| 1000 | 631271 | Lecl1 | Lens clarity QTL 1 | | 0.001 | lens clarity trait (VT:0001304) | age of onset/diagnosis of cataract (CMO:0001584) | 8 | 18984168 | 84531599 | Rat | n/a | region | qtl |
| 1000 | 2317036 | Livw3 | Liver weight QTL 3 | 2.43 | 0.01 | liver mass (VT:0003402) | liver weight to body weight ratio (CMO:0000633) | 8 | 4705810 | 49705810 | Rat | n/a | region | qtl |
| 1000 | 61373 | Mcs4 | Mammary carcinoma susceptibility QTL 4 | 1.1 | | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 8 | 16290444 | 61290444 | Rat | n/a | region | qtl |
| 1000 | 1598824 | Memor4 | Memory QTL 4 | 2.5 | | exploratory behavior trait (VT:0010471) | total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443) | 8 | 9712220 | 53356647 | Rat | n/a | region | qtl |
| 1000 | 1549908 | Neudeg1 | Neurodegradation QTL 1 | 5.5 | 0 | nervous system integrity trait (VT:0010566) | logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986) | 8 | 30188867 | 94457446 | Rat | n/a | region | qtl |
| 1000 | 1300146 | Rf17 | Renal function QTL 17 | 2.9 | | renal blood flow trait (VT:2000006) | absolute change in renal blood flow rate (CMO:0001168) | 8 | 28242912 | 73242912 | Rat | n/a | region | qtl |
| 1000 | 1357398 | Slep3 | Serum leptin concentration QTL 3 | 3.43 | | blood leptin amount (VT:0005667) | serum leptin level (CMO:0000780) | 8 | 9712463 | 41866876 | Rat | n/a | region | qtl |
| 1000 | 2302367 | Slep5 | Serum leptin concentration QTL 5 | 3.43 | | blood leptin amount (VT:0005667) | serum leptin level (CMO:0000780) | 8 | 9712463 | 41866876 | Rat | n/a | region | qtl |
| 1000 | 631648 | Stl5 | Serum triglyceride level QTL 5 | 4 | 0.0003 | blood triglyceride amount (VT:0002644) | plasma triglyceride level (CMO:0000548) | 8 | 27205715 | 54998217 | Rat | n/a | region | qtl |
| 1000 | 631650 | Stl6 | Serum triglyceride level QTL 6 | 4 | 0.0019 | blood triglyceride amount (VT:0002644) | plasma triglyceride level (CMO:0000548) | 8 | 10378157 | 112202585 | Rat | n/a | region | qtl |
| 1000 | 1558646 | Swd5 | Spike wave discharge measurement QTL 5 | 3.45 | 0.00036 | brain electrophysiology trait (VT:0010557) | brain spike-and-wave discharge frequency (CMO:0001742) | 8 | 14906751 | 59906751 | Rat | n/a | region | qtl |
| 1000 | 724514 | Uae15 | Urinary albumin excretion QTL 15 | 2.9 | | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 8 | 29502665 | 70386295 | Rat | n/a | region | qtl |
| 1000 | 731182 | Uae24 | Urinary albumin excretion QTL 24 | 6.4 | | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 8 | 19331152 | 93965294 | Rat | n/a | region | qtl |
| 1000 | 724540 | Uae8 | Urinary albumin excretion QTL 8 | 5 | | urine albumin amount (VT:0002871) | urine albumin level (CMO:0000130) | 8 | 28157323 | 30848259 | Rat | n/a | region | qtl |
| 1000 | 8662823 | Vetf5 | Vascular elastic tissue fragility QTL 5 | 1.9 | | artery integrity trait (VT:0010639) | patent ductus arteriosus score (CMO:0002566) | 8 | 28242912 | 99525068 | Rat | n/a | region | qtl |
| 1000 | 2317030 | Wbc5 | White blood cell count QTL 5 | 3.21 | 0.005 | leukocyte quantity (VT:0000217) | white blood cell count (CMO:0000027) | 8 | 8736635 | 53736635 | Rat | n/a | region | qtl |