| 1000 | 1300940 | Actd3_m | activity-distance traveled 3 (mouse) | | | Not determined | | 5 | 96320385 | 130320533 | Mouse | n/a | region | qtl |
| 1000 | 9587780 | Afw16_m | abdominal fat weight QTL 16 (mouse) | | | Not determined | | 5 | 92830166 | 126830285 | Mouse | n/a | region | qtl |
| 1000 | 13464249 | Ahl16_m | age related hearing loss, early onset 16 (mouse) | | | | | 5 | 76445064 | 110445225 | Mouse | n/a | region | qtl |
| 1000 | 13464242 | Ahl17_m | age related hearing loss, early onset 17 (mouse) | | | | | 5 | 82838468 | 116838597 | Mouse | n/a | region | qtl |
| 1000 | 13464241 | Ahl18_m | age related hearing loss, early onset 18 (mouse) | | | | | 5 | 87386871 | 121387065 | Mouse | n/a | region | qtl |
| 1000 | 13464244 | Ahl19_m | age related hearing loss, early onset 19 (mouse) | | | | | 5 | 95465549 | 129465722 | Mouse | n/a | region | qtl |
| 1000 | 1301877 | Bbaa3_m | B.burgdorferi-associated arthritis 3 (mouse) | | | Not determined | | 5 | 99455285 | 112465722 | Mouse | n/a | region | qtl |
| 1000 | 10401246 | Bglu13_m | blood glucose level 13 (mouse) | | | Not determined | | 5 | 79539640 | 113539786 | Mouse | n/a | region | qtl |
| 1000 | 10401245 | Bglu18_m | blood glucose level 18 (mouse) | | | Not determined | | 5 | 82838468 | 116838597 | Mouse | n/a | region | qtl |
| 1000 | 1301126 | Bwem1_m | body weight day 30 males 1 (mouse) | | | Not determined | | 5 | 87386871 | 121387065 | Mouse | n/a | region | qtl |
| 1000 | 1301691 | Cdcs10_m | cytokine deficiency colitis susceptibility 10 (mouse) | | | Not determined | | 5 | 76280786 | 110280917 | Mouse | n/a | region | qtl |
| 1000 | 1301457 | Cfsw2_m | cystic fibrosis survival to weaning 2 (mouse) | | | Not determined | | 5 | 90561006 | 124561151 | Mouse | n/a | region | qtl |
| 1000 | 1301974 | Chab7_m | cholesterol absorption 7 (mouse) | | | Not determined | | 5 | 95233214 | 129233330 | Mouse | n/a | region | qtl |
| 1000 | 10043958 | Chldq12_m | cholesterol and HDL QTL 12 (mouse) | | | Not determined | | 5 | 87386871 | 121387065 | Mouse | n/a | region | qtl |
| 1000 | 4141505 | Chlq14_m | circulating hormone level QTL 14 (mouse) | | | Not determined | | 5 | 76280786 | 110280917 | Mouse | n/a | region | qtl |
| 1000 | 1357431 | Cia27_m | collagen induced arthritis 27 (mouse) | | | Not determined | | 5 | 75315348 | 120018629 | Mouse | n/a | region | qtl |
| 1000 | 1300931 | Cocrb6_m | cocaine related behavior 6 (mouse) | | | Not determined | | 5 | 76445064 | 110445225 | Mouse | n/a | region | qtl |
| 1000 | 1301399 | Cpfd3_m | cerebellum pattern fissures (mouse) | | | Not determined | | 5 | 87386871 | 121387065 | Mouse | n/a | region | qtl |
| 1000 | 1301419 | Cypr3_m | cytokine production 3 (mouse) | | | Not determined | | 5 | 81019649 | 115019803 | Mouse | n/a | region | qtl |
| 1000 | 1301713 | Dbsty2_m | diabesity 2 (mouse) | | | Not determined | | 5 | 76445064 | 110445225 | Mouse | n/a | region | qtl |
| 1000 | 10402486 | Dipa1_m | drug induced psychomotor activation 1 (mouse) | | | Not determined | | 5 | 95465549 | 129465722 | Mouse | n/a | region | qtl |
| 1000 | 1300801 | Drb2_m | dopamine receptor binding 2 (mouse) | | | Not determined | | 5 | 87386871 | 121387065 | Mouse | n/a | region | qtl |
| 1000 | 1357725 | Eae39_m | experimental allergic encephalomyelitis 39 (mouse) | | | Not determined | | 5 | 89418876 | 118864028 | Mouse | n/a | region | qtl |
| 1000 | 1357644 | Egrd1_m | early growth rate, direct effect 1 (mouse) | | | Not determined | | 5 | 95434580 | 129434786 | Mouse | n/a | region | qtl |
| 1000 | 1301042 | Elmaz1_m | elevated maze behavior 1 (mouse) | | | Not determined | | 5 | 98019649 | 116876624 | Mouse | n/a | region | qtl |
| 1000 | 10043993 | Hbnr10_m | Heligmosomoides bakeri nematode resistance 10 (mouse) | | | Not determined | | 5 | 72418876 | 106419011 | Mouse | n/a | region | qtl |
| 1000 | 1300986 | Hdlq2_m | HDL QTL 2 (mouse) | | | Not determined | | 5 | 76280786 | 110280917 | Mouse | n/a | region | qtl |
| 1000 | 4141519 | Hmtb5_m | hemostasis and thrombosis bleeding time 5 (mouse) | | | Not determined | | | 99949422 | 126882944 | Mouse | n/a | region | qtl |
| 1000 | 26884395 | Humsd2_m | humerus midshaft diameter 2, 10 week (mouse) | | | | | 5 | 70057343 | 132528839 | Mouse | n/a | region | qtl |
| 1000 | 1300993 | Hycdc_m | hypercapnic duty cycle (mouse) | | | Not determined | | 5 | 90561006 | 124561151 | Mouse | n/a | region | qtl |
| 1000 | 1558774 | Lith17_m | lithogenic gene 17 (mouse) | | | Not determined | | 5 | 95465549 | 129465722 | Mouse | n/a | region | qtl |
| 1000 | 1301524 | Lmb2_m | lupus in MRL and B6 F2 cross (mouse) | | | Not determined | | 5 | 37581488 | 112465722 | Mouse | n/a | region | qtl |
| 1000 | 11041665 | Lmr24_m | leishmaniasis resistance 24 (mouse) | | | | | 5 | 52694462 | 107321041 | Mouse | n/a | region | qtl |
| 1000 | 11041899 | Lmr24a_m | leishmaniasis resistance 24a (mouse) | | | | | 5 | 52694462 | 107321041 | Mouse | n/a | region | qtl |
| 1000 | 11049562 | Lmr24f_m | leishmaniasis resistance 24f (mouse) | | | | | 5 | 90320962 | 124321041 | Mouse | n/a | region | qtl |
| 1000 | 25314315 | Mlh1fc4_m | MLH1 foci count 4 (mouse) | | | | | 5 | 74460661 | 132528839 | Mouse | n/a | region | qtl |
| 1000 | 10755524 | Mono1_m | monocyte differential 1 (mouse) | | | | | 5 | 80849259 | 114849259 | Mouse | n/a | region | qtl |
| 1000 | 1300659 | Pcd8ts1_m | p-glycoprotein positive CD8 T cell subset 1 (mouse) | | | Not determined | | 5 | 97021753 | 131021986 | Mouse | n/a | region | qtl |
| 1000 | 1301362 | Prnr1_m | prion resistance 1 (mouse) | | | Not determined | | 5 | 89418876 | 146787935 | Mouse | n/a | region | qtl |
| 1000 | 13506928 | Recrq8_m | recombination rate in male meiosis QTL 8 (mouse) | | | | | 5 | 74460661 | 132528839 | Mouse | n/a | region | qtl |
| 1000 | 4142317 | Rgcs1_m | retinal ganglion cell susceptible 1 (mouse) | | | Not determined | | | 55388334 | 108762627 | Mouse | n/a | region | qtl |
| 1000 | 11341716 | Rvfs3_m | Rift Valley fever susceptibility 3 (mouse) | | | | | 5 | 26441234 | 138455402 | Mouse | n/a | region | qtl |
| 1000 | 4141438 | Skmw13_m | skeletal muscle weight 13 (mouse) | | | Not determined | | 5 | 76190263 | 110190479 | Mouse | n/a | region | qtl |
| 1000 | 1300968 | Skts4_m | skin tumor susceptibility 4 (mouse) | | | Not determined | | 5 | 89418876 | 124238239 | Mouse | n/a | region | qtl |
| 1000 | 1301858 | Smdq1_m | segregation of mitochondrial DNA QTL 1 (mouse) | | | Not determined | | 5 | 97021753 | 131021986 | Mouse | n/a | region | qtl |
| 1000 | 12904959 | Smmq1_m | soleus muscle mass QTL 1 (mouse) | | | | | 5 | 100665965 | 134665965 | Mouse | n/a | region | qtl |
| 1000 | 12904945 | Tammq2_m | tibialis anterior muscle mass QTL 2 (mouse) | | | | | 5 | 100665965 | 134665965 | Mouse | n/a | region | qtl |
| 1000 | 1301829 | Thyls2_m | thymic lymphoma susceptibility 2 (mouse) | | | Not determined | | 5 | 76445064 | 110445225 | Mouse | n/a | region | qtl |
| 1000 | 27226719 | Tibw6_m | tibia width 6, proximal, 16 week (mouse) | | | | | 5 | 72857343 | 139985755 | Mouse | n/a | region | qtl |
| 1000 | 10045978 | Tir10_m | trypanosome infection response 10 (mouse) | | | Not determined | | 5 | 98019649 | 114021986 | Mouse | n/a | region | qtl |
| 1000 | 10045972 | Tir5_m | trypanosome infection response 5 (mouse) | | | Not determined | | 5 | 63705442 | 104387065 | Mouse | n/a | region | qtl |
| 1000 | 4142064 | Tmc1m4_m | Tmc1 modifier 4 (mouse) | | | Not determined | | 5 | 54500177 | 127001072 | Mouse | n/a | region | qtl |