| 1000 | 1302180 | Actd4_m | activity-distance traveled 4 (mouse) | | | Not determined | | 9 | 32434563 | 66434857 | Mouse | n/a | region | qtl |
| 1000 | 10043877 | Adip21_m | adiposity 21 (mouse) | | | Not determined | | 9 | 56439108 | 90439255 | Mouse | n/a | region | qtl |
| 1000 | 1301456 | Adip5_m | adiposity 5 (mouse) | | | Not determined | | 9 | 59369946 | 93370128 | Mouse | n/a | region | qtl |
| 1000 | 4142042 | Alpq3_m | alcohol preference QTL 3 (mouse) | | | Not determined | | 9 | 37306197 | 98701707 | Mouse | n/a | region | qtl |
| 1000 | 12790992 | Arlsq1_m | aortic root lesion size QTL 1 (mouse) | | | | | 9 | 38099575 | 72099575 | Mouse | n/a | region | qtl |
| 1000 | 12791002 | Arlsq2_m | aortic root lesion size QTL 2 (mouse) | | | | | 9 | 38099575 | 72099575 | Mouse | n/a | region | qtl |
| 1000 | 4141071 | Ath29_m | atherosclerosis 29 (mouse) | | | Not determined | | 9 | 40419594 | 74607925 | Mouse | n/a | region | qtl |
| 1000 | 1301549 | Bbaa9_m | B.burgdorferi-associated arthritis 9 (mouse) | | | Not determined | | 9 | 57805047 | 71481754 | Mouse | n/a | region | qtl |
| 1000 | 1301184 | Bdln4_m | body length 4 (mouse) | | | Not determined | | 9 | 50151320 | 84151448 | Mouse | n/a | region | qtl |
| 1000 | 13208563 | Bmiq8_m | body mass index QTL 8 (mouse) | | | | | 9 | 24911296 | 68907282 | Mouse | n/a | region | qtl |
| 1000 | 1301702 | Brm1_m | brachyury modifier 1 (mouse) | | | Not determined | | 9 | 40805047 | 74805204 | Mouse | n/a | region | qtl |
| 1000 | 1300716 | Cd4ts4_m | CD4 T cell subset 4 (mouse) | | | Not determined | | 9 | 48831056 | 82831177 | Mouse | n/a | region | qtl |
| 1000 | 1301972 | Cocrb8_m | cocaine related behavior 8 (mouse) | | | Not determined | | 9 | 35034478 | 69034599 | Mouse | n/a | region | qtl |
| 1000 | 4141148 | Cq5_m | cholesterol QTL 5 (mouse) | | | Not determined | | 9 | 32452421 | 66452546 | Mouse | n/a | region | qtl |
| 1000 | 4141224 | Dxmod_m | doxorubicin nephropathy modifier (mouse) | | | Not determined | | | 49452421 | 101406120 | Mouse | n/a | region | qtl |
| 1000 | 1301049 | El4_m | epilepsy 4 (mouse) | | | Not determined | | 9 | 49420298 | 67151448 | Mouse | n/a | region | qtl |
| 1000 | 1301252 | Etohc3_m | ethanol consumption 3 (mouse) | | | Not determined | | 9 | 35034478 | 69034599 | Mouse | n/a | region | qtl |
| 1000 | 1301172 | Fembrs6_m | femur breaking strength 6 (mouse) | | | Not determined | | 9 | 59024387 | 93024534 | Mouse | n/a | region | qtl |
| 1000 | 10045639 | Heal28_m | wound healing/regeneration 28 (mouse) | | | Not determined | | 9 | 43480714 | 77480860 | Mouse | n/a | region | qtl |
| 1000 | 13525008 | Hrtiq1_m | heart rate time index, QTL 1 (mouse) | | | | | 9 | 52426098 | 68556008 | Mouse | n/a | region | qtl |
| 1000 | 1301692 | Hts_m | hypothermia sensitivity (mouse) | | | Not determined | | 9 | 32511172 | 66511421 | Mouse | n/a | region | qtl |
| 1000 | 1558872 | Ibdq1_m | inflammatory bowel disease QTL 1 (mouse) | | | Not determined | | 9 | 33978840 | 73439255 | Mouse | n/a | region | qtl |
| 1000 | 13525007 | Lfhrvq1_m | low frequency time index heart rate varaiblity, QTL 1 (mouse) | | | | | 9 | 58784318 | 68556008 | Mouse | n/a | region | qtl |
| 1000 | 1301611 | Lrnx3_m | learning contextual 3 (mouse) | | | Not determined | | 9 | 62149767 | 96149881 | Mouse | n/a | region | qtl |
| 1000 | 14746993 | Manh66_m | mandible shape 66 (mouse) | | | | | 9 | 49814048 | 83814048 | Mouse | n/a | region | qtl |
| 1000 | 5491195 | Mobq8_m | multigenic obesity QTL 8 (mouse) | | | Not determined | | 9 | 59369946 | 93370128 | Mouse | n/a | region | qtl |
| 1000 | 4141676 | Neogq1_m | neonatal growth QTL 1 (mouse) | | | Not determined | | 9 | 57805047 | 86121973 | Mouse | n/a | region | qtl |
| 1000 | 4141572 | Ntta3_m | neurotensin transcript abundance 3 (mouse) | | | Not determined | | | 46597671 | 65831177 | Mouse | n/a | region | qtl |
| 1000 | 10043971 | Obq32_m | obesity QTL 32 (mouse) | | | Not determined | | 9 | 37819528 | 71819528 | Mouse | n/a | region | qtl |
| 1000 | 12790986 | Pcho9_m | plasma cholesterol 9 (mouse) | | | | | 9 | 38099575 | 72099575 | Mouse | n/a | region | qtl |
| 1000 | 1300563 | Pgia5_m | proteoglycan induced arthritis 5 (mouse) | | | Not determined | | 9 | 48831056 | 82831177 | Mouse | n/a | region | qtl |
| 1000 | 4141323 | Ptnu3_m | proteinuria 3 (mouse) | | | Not determined | | 9 | 32889702 | 66889836 | Mouse | n/a | region | qtl |
| 1000 | 1301241 | Renf1_m | renal failure 1 (mouse) | | | Not determined | | 9 | 52034478 | 99792481 | Mouse | n/a | region | qtl |
| 1000 | 1357709 | Si5lq3_m | serum IGFBP-5 level QTL 3 (mouse) | | | Not determined | | 9 | 33111025 | 67111140 | Mouse | n/a | region | qtl |
| 1000 | 1300848 | Skull13_m | skull morphology 13 (mouse) | | | Not determined | | 9 | 59369946 | 93370128 | Mouse | n/a | region | qtl |
| 1000 | 12738449 | Spcq2_m | sperm count QTL 2 (mouse) | | | | | 9 | 39399885 | 73399885 | Mouse | n/a | region | qtl |
| 1000 | 1357635 | Splq4_m | spleen weight QTL 4 (mouse) | | | Not determined | | 9 | 63239711 | 120191934 | Mouse | n/a | region | qtl |
| 1000 | 1301558 | Stheal8_m | soft tissue heal 8 (mouse) | | | Not determined | | 9 | 43480714 | 77480860 | Mouse | n/a | region | qtl |
| 1000 | 1301803 | Stheal9_m | soft tissue heal 9 (mouse) | | | Not determined | | 9 | 59024387 | 93024534 | Mouse | n/a | region | qtl |
| 1000 | 4141545 | Tailaq2_m | tail length adjusted QTL 2 (mouse) | | | Not determined | | | 63239711 | 120191934 | Mouse | n/a | region | qtl |
| 1000 | 1558968 | Tbdr1_m | body temperature response to dietary restriction, QTL 1 (mouse) | | | Not determined | | 9 | 35034478 | 69034599 | Mouse | n/a | region | qtl |
| 1000 | 13207569 | Tcq13_m | total cholesterol QTL 13 (mouse) | | | | | 9 | 59897283 | 109089068 | Mouse | n/a | region | qtl |
| 1000 | 12790990 | Tgl7_m | triglyceride 7 (mouse) | | | | | 9 | 54559960 | 88559960 | Mouse | n/a | region | qtl |
| 1000 | 1301435 | Trigq1_m | triglyceride QTL 1 (mouse) | | | Not determined | | 9 | 44428174 | 78428262 | Mouse | n/a | region | qtl |
| 1000 | 1301965 | Vmbic5_m | ventral midbrain iron content 5 (mouse) | | | Not determined | | 9 | 57591492 | 65831177 | Mouse | n/a | region | qtl |
| 1000 | 1357746 | Vtbt7_m | vertebral trabecular bone trait 7 (mouse) | | | Not determined | | 9 | 30739915 | 64740021 | Mouse | n/a | region | qtl |
| 1000 | 4141833 | W10q13_m | weight 10 weeks QTL 13 (mouse) | | | Not determined | | | 63239711 | 120191934 | Mouse | n/a | region | qtl |