| 1000 | 12791003 | Aath8_m | aortic arch atherosclerosis 8 (mouse) | | | | | 15 | 73545941 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 1302197 | Bhr2_m | bronchial hyperresponsiveness 2 (mouse) | | | Not determined | | 15 | 64434485 | 103517472 | Mouse | n/a | region | qtl |
| 1000 | 1302163 | Bmd16_m | bone mineral density 16 (mouse) | | | Not determined | | 18 | 29534847 | 63534993 | Mouse | n/a | region | qtl |
| 1000 | 1302074 | Bmd4_m | bone mineral density 4 (mouse) | | | Not determined | | 15 | 56323312 | 103517472 | Mouse | n/a | region | qtl |
| 1000 | 1301171 | Brm2_m | brachyury modifier 2 (mouse) | | | Not determined | | 15 | 65641175 | 99641298 | Mouse | n/a | region | qtl |
| 1000 | 12904745 | Carcdq2_m | cardiac collagen deposition QTL 2 (mouse) | | | | | 18 | 46290216 | 80290216 | Mouse | n/a | region | qtl |
| 1000 | 13504731 | Cath5_m | carotid atherosclerosis 5 (mouse) | | | | | 15 | 54917280 | 88917280 | Mouse | n/a | region | qtl |
| 1000 | 38455998 | Cdtm1_m | CD62L+ CD8 TM cells 1 (mouse) | | | | | 18 | 60000000 | 80000000 | Mouse | n/a | region | qtl |
| 1000 | 4142366 | Chlq10_m | circulating hormone level QTL 10 (mouse) | | | Not determined | | 18 | 36157950 | 70158108 | Mouse | n/a | region | qtl |
| 1000 | 4141135 | Cia35_m | collagen induced arthritis 35 (mouse) | | | Not determined | | 15 | 64927625 | 98927745 | Mouse | n/a | region | qtl |
| 1000 | 4141902 | Cia37_m | collagen induced arthritis 37 (mouse) | | | Not determined | | 15 | 80987052 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 1301708 | Cocrb14_m | cocaine related behavior 14 (mouse) | | | Not determined | | 15 | 51934666 | 85934802 | Mouse | n/a | region | qtl |
| 1000 | 1301284 | Cosz3_m | cocaine seizure 3 (mouse) | | | Not determined | | 15 | 80415753 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 26884425 | Cvht2_m | cranial vault height 2, 5 week (mouse) | | | | | 15 | 28800000 | 102100000 | Mouse | n/a | region | qtl |
| 1000 | 26884402 | Cvht9_m | cranial vault height 9, 16 week (mouse) | | | | | 15 | 42300000 | 95600000 | Mouse | n/a | region | qtl |
| 1000 | 1300648 | Dbsty4_m | diabesity 4 (mouse) | | | Not determined | | 15 | 70465070 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 10402490 | Dipa5_m | drug induced psychomotor activation 5 (mouse) | | | Not determined | | 15 | 79265530 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 1301119 | Drb7_m | dopamine receptor binding 7 (mouse) | | | Not determined | | 15 | 65452377 | 99456827 | Mouse | n/a | region | qtl |
| 1000 | 4141132 | Eae18_m | experimental allergic encephalomyelitis susceptibility 18 (mouse) | | | Not determined | | | 57457487 | 82586603 | Mouse | n/a | region | qtl |
| 1000 | 1558985 | Eae32_m | experimental allergic encephalomyelitis susceptibility 32 (mouse) | | | Not determined | | 15 | 32578270 | 103517472 | Mouse | n/a | region | qtl |
| 1000 | 1357894 | Epfpq3_m | epididymal fat percentage QTL 3 (mouse) | | | Not determined | | 15 | 78716903 | 102993272 | Mouse | n/a | region | qtl |
| 1000 | 1301601 | Faq9_m | fluctuating asymmetry QTL 9 (mouse) | | | Not determined | | 15 | 63279702 | 97279794 | Mouse | n/a | region | qtl |
| 1000 | 12880430 | Fgf23lq4_m | FGF23 serum level QTL 4 (mouse) | | | | | 18 | 56300000 | 90300000 | Mouse | n/a | region | qtl |
| 1000 | 1300644 | Fob3_m | F-line obesity QTL 3 (mouse) | 11.3 | | Not determined | | 15 | 44144438 | 89377036 | Mouse | n/a | region | qtl |
| 1000 | 4142198 | Hbtq_m | habituation QTL (mouse) | | | Not determined | | 15 | 51288859 | 85288984 | Mouse | n/a | region | qtl |
| 1000 | 1302099 | Hdlq30_m | HDL QTL 30 (mouse) | | | Not determined | | 18 | 51535229 | 85535397 | Mouse | n/a | region | qtl |
| 1000 | 10045637 | Heal27_m | wound healing/regeneration 29 (mouse) | | | Not determined | | 15 | 51546512 | 85546662 | Mouse | n/a | region | qtl |
| 1000 | 1300851 | Heal4_m | wound healing/regeneration 4 (mouse) | | | Not determined | | 15 | 77629711 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 1301853 | Heal9_m | wound healing/regeneration 9 (mouse) | | | Not determined | | 18 | 52672205 | 86672345 | Mouse | n/a | region | qtl |
| 1000 | 25823173 | Hrsq12_m | host response to SARS QTL 12, hemorrhage (mouse) | | | | | 18 | 24762824 | 78296340 | Mouse | n/a | region | qtl |
| 1000 | 1301902 | Hrtfm4_m | heart failure modifier 4 (mouse) | | | Not determined | | 18 | 43178048 | 77178271 | Mouse | n/a | region | qtl |
| 1000 | 26884399 | Humsd1_m | humerus midshaft diameter 1, 5 week (mouse) | | | | | 15 | 48500000 | 101800000 | Mouse | n/a | region | qtl |
| 1000 | 26884397 | Humsd5_m | humerus midshaft diameter 5, 10 week (mouse) | | | | | 15 | 48500000 | 98500000 | Mouse | n/a | region | qtl |
| 1000 | 1357526 | Hyplip2_m | hyperlipidemia 2 (mouse) | | | Not determined | | 15 | 12402117 | 102988123 | Mouse | n/a | region | qtl |
| 1000 | 15092079 | Igly6_m | IgG glycosylation 6, GP6 (mouse) | | | | | 15 | 74228691 | 82789955 | Mouse | n/a | region | qtl |
| 1000 | 15092080 | Igly7_m | IgG glycosylation 7, GP10 (mouse) | | | | | 15 | 77910719 | 82789955 | Mouse | n/a | region | qtl |
| 1000 | 4141897 | Imrfq2_m | immune response to Factor IX QTL 2 (mouse) | | | Not determined | | | 80011059 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 1301353 | Lbw6_m | lupus NZB x NZW 6 (mouse) | | | Not determined | | 18 | 57429267 | 90702639 | Mouse | n/a | region | qtl |
| 1000 | 15039384 | Liviq1_m | liver inflammation QTL 1 (mouse) | | | | | 18 | 38073497 | 72073497 | Mouse | n/a | region | qtl |
| 1000 | 1301400 | Lmr13_m | leishmaniasis resistance 13 (mouse) | | | Not determined | | 18 | 27976313 | 61976451 | Mouse | n/a | region | qtl |
| 1000 | 11049564 | Lmr29_m | leishmaniasis resistance 29 (mouse) | | | | | 18 | 59047021 | 90702639 | Mouse | n/a | region | qtl |
| 1000 | 15039381 | Ltgq8_m | liver triglyceride QTL 8 (mouse) | | | | | 18 | 38073497 | 72073497 | Mouse | n/a | region | qtl |
| 1000 | 11039492 | Ltpr8a_m | Leishmania tropica response 8a (mouse) | | | | | 18 | 59047021 | 90702639 | Mouse | n/a | region | qtl |
| 1000 | 11039494 | Ltpr8b_m | Leishmania tropica response 8b (mouse) | | | | | 18 | 46741832 | 80741971 | Mouse | n/a | region | qtl |
| 1000 | 11039495 | Ltpr8c_m | Leishmania tropica response 8c (mouse) | | | | | 18 | 59047021 | 90702639 | Mouse | n/a | region | qtl |
| 1000 | 11039493 | Ltpr8d_m | Leishmania tropica response 8d (mouse) | | | | | 18 | 46741832 | 80741971 | Mouse | n/a | region | qtl |
| 1000 | 14747011 | Mancz13_m | mandible centroid size 13 (mouse) | | | | | 15 | 72498466 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 14928306 | Manh79_m | mandible shape 79 (mouse) | | | | | 15 | 78949676 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 4140971 | Mbmq1_m | male body mass QTL 1 (mouse) | | | Not determined | | | 57857210 | 90702639 | Mouse | n/a | region | qtl |
| 1000 | 4141857 | Mhysq5_m | male hybrid sterility QTL 5 (mouse) | | | Not determined | | | 27997537 | 61997672 | Mouse | n/a | region | qtl |
| 1000 | 11252137 | Modvl5_m | modifier of vacuolated lens 5 (mouse) | | | | | 18 | 50919085 | 84919240 | Mouse | n/a | region | qtl |
| 1000 | 1357603 | Mom3_m | modifier of Min 3 (mouse) | | | Not determined | | 18 | 13896966 | 66965891 | Mouse | n/a | region | qtl |
| 1000 | 4141431 | Msmr2_m | MSM lymphoma resistance 2 (mouse) | | | Not determined | | | 54842801 | 61105798 | Mouse | n/a | region | qtl |
| 1000 | 15039386 | Mvlq4_m | macrovesicular liver lesion QTL 4 (mouse) | | | | | 18 | 38073497 | 72073497 | Mouse | n/a | region | qtl |
| 1000 | 15039383 | Mvlq5_m | microvesicular liver lesion QTL 5 (mouse) | | | | | 18 | 38073497 | 72073497 | Mouse | n/a | region | qtl |
| 1000 | 12050070 | Nabq2_m | nasal bone morphology QTL 2 (mouse) | | | | | 18 | 38970605 | 72970721 | Mouse | n/a | region | qtl |
| 1000 | 1357639 | Obsty4_m | obesity 4 (mouse) | | | Not determined | | 18 | 39486861 | 84620653 | Mouse | n/a | region | qtl |
| 1000 | 1301472 | Pain1_m | pain 1 (mouse) | | | Not determined | | 15 | 75448997 | 90928982 | Mouse | n/a | region | qtl |
| 1000 | 10412067 | Pain2_m | pain 2 (mouse) | | | Not determined | | 15 | 51773490 | 85773777 | Mouse | n/a | region | qtl |
| 1000 | 10412244 | Par5_m | pulmonary adenoma resistance 5 (mouse) | | | Not determined | | 18 | 51535229 | 85535397 | Mouse | n/a | region | qtl |
| 1000 | 1301429 | Pcir3_m | periosteal circumference 3 (mouse) | | | Not determined | | 15 | 48593513 | 82593647 | Mouse | n/a | region | qtl |
| 1000 | 1301771 | Pcyts6_m | plasmacytoma susceptibility 6 (mouse) | | | Not determined | | 18 | 35525560 | 69525779 | Mouse | n/a | region | qtl |
| 1000 | 1357407 | Pfat4_m | predicted fat percentage 4 (mouse) | 8.6 | | Body fat amount | predicted fat percentage | 15 | 57245156 | 91245304 | Mouse | n/a | region | qtl |
| 1000 | 1301103 | Pgia11_m | proteoglycan induced arthritis 11 (mouse) | | | Not determined | | 18 | 59826489 | 90702639 | Mouse | n/a | region | qtl |
| 1000 | 1300974 | Pgia9_m | proteoglycan induced arthritis 9 (mouse) | | | Not determined | | 15 | 80987052 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 4142443 | Pgis1_m | proteoglycan induced spondylitis 1 (mouse) | | | Not determined | | 18 | 53157950 | 76826598 | Mouse | n/a | region | qtl |
| 1000 | 1300726 | Pitm4_m | prion incubation time 4 (mouse) | | | Not determined | | 15 | 70465070 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 4141921 | Pstc3_m | periosteal circumference 3 (mouse) | | | Not determined | | 15 | 67386497 | 101386646 | Mouse | n/a | region | qtl |
| 1000 | 12910791 | Pwgrq8_m | pre-weaning growth rate QTL 8 (mouse) | | | | | 18 | 57888327 | 69216071 | Mouse | n/a | region | qtl |
| 1000 | 1302050 | Radpf4_m | radiation pulmonary fibrosis 4 (mouse) | | | Not determined | | 18 | 52833084 | 68645706 | Mouse | n/a | region | qtl |
| 1000 | 1300685 | Scc5_m | colon tumor susceptibility 5 (mouse) | | | Not determined | | 18 | 31855413 | 65855562 | Mouse | n/a | region | qtl |
| 1000 | 1300800 | Ses3_m | salmonella enteritidis susceptibility 3 (mouse) | | | Not determined | | 15 | 57245156 | 91245304 | Mouse | n/a | region | qtl |
| 1000 | 26884442 | Sklq6_m | skull length QTL 6, 5 week (mouse) | | | | | 15 | 6100000 | 100900000 | Mouse | n/a | region | qtl |
| 1000 | 1300627 | Sluc26_m | susceptibility to lung cancer 26 (mouse) | | | Not determined | | 15 | 70461452 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 1302109 | Sluc28_m | susceptibility to lung cancer 28 (mouse) | | | Not determined | | 18 | 59847626 | 90702639 | Mouse | n/a | region | qtl |
| 1000 | 10412183 | Sstapa2_m | Suseptibility to Staphylococus aureus infection 2 (mouse) | | | Not determined | | 18 | 56661558 | 66819414 | Mouse | n/a | region | qtl |
| 1000 | 1302080 | Szs13_m | seizure susceptibility 13 (mouse) | | | Not determined | | 15 | 51813983 | 85822600 | Mouse | n/a | region | qtl |
| 1000 | 1301500 | Szs4_m | seizure susceptibility 4 (mouse) | | | Not determined | | 18 | 54842801 | 85496018 | Mouse | n/a | region | qtl |
| 1000 | 1357630 | Tgq1_m | triglyceride QTL 1 (mouse) | | | Not determined | | 18 | 50919085 | 84919240 | Mouse | n/a | region | qtl |
| 1000 | 1301215 | Thcr_m | T helper cell response (mouse) | | | Not determined | | 18 | 44997537 | 68645706 | Mouse | n/a | region | qtl |
| 1000 | 27226777 | Tibl8_m | tibia length 8, 5 week (mouse) | | | | | 15 | 6900000 | 84700000 | Mouse | n/a | region | qtl |
| 1000 | 27226729 | Tibmd2_m | tibia midshaft diameter 2, 5 week (mouse) | | | | | 15 | 38000000 | 86800000 | Mouse | n/a | region | qtl |
| 1000 | 27226734 | Tibmd5_m | tibia midshaft diameter 5, 10 week (mouse) | | | | | 15 | 6100000 | 86800000 | Mouse | n/a | region | qtl |
| 1000 | 27226720 | Tibw5_m | tibia width 5, proximal, 10 week (mouse) | | | | | 18 | 50300000 | 62500000 | Mouse | n/a | region | qtl |
| 1000 | 27226723 | Tibw9_m | tibia width 9, proximal, 16 week (mouse) | | | | | 18 | 3200000 | 60800000 | Mouse | n/a | region | qtl |
| 1000 | 38501067 | Tip3_m | tuberculosis immunophenotype 3, IFN-g level (mouse) | | | | | 15 | 53700000 | 89700000 | Mouse | n/a | region | qtl |
| 1000 | 27095936 | Ulnl4_m | ulna length 4, 5 week (mouse) | | | | | 15 | 56900000 | 87800000 | Mouse | n/a | region | qtl |
| 1000 | 12880411 | V125Dq11_m | vitamin D active form serum level QTL 11 (mouse) | | | | | 15 | 79000000 | 104043685 | Mouse | n/a | region | qtl |
| 1000 | 12880412 | V125Dq12_m | vitamin D active form serum level QTL 12 (mouse) | | | | | 18 | 30100000 | 64100000 | Mouse | n/a | region | qtl |
| 1000 | 12880410 | V125Dq13_m | vitamin D active form serum level QTL 13 (mouse) | | | | | 18 | 56300000 | 90300000 | Mouse | n/a | region | qtl |
| 1000 | 12880428 | V125Dq14_m | vitamin D active form serum level QTL 14 (mouse) | | | | | 18 | 57300000 | 90702639 | Mouse | n/a | region | qtl |
| 1000 | 12880420 | V25Dq8_m | vitamin D inactive form serum level QTL 8 (mouse) | | | | | 15 | 61700000 | 95700000 | Mouse | n/a | region | qtl |
| 1000 | 1357690 | Vtbt19_m | vertebral trabecular bone trait 19 (mouse) | | | Not determined | | 18 | 32957976 | 66958154 | Mouse | n/a | region | qtl |
| 1000 | 1558849 | W3q15_m | weight 3 weeks QTL 15 (mouse) | | | Not determined | | 18 | 5041119 | 61139571 | Mouse | n/a | region | qtl |
| 1000 | 4142060 | W3q6_m | weight 3 weeks QTL 6 (mouse) | | | Not determined | | | 78716903 | 102993272 | Mouse | n/a | region | qtl |