| 1000 | 1301530 | Bglu2_m | blood glucose level 2 (mouse) | | | Not determined | | 13 | 108965303 | 110699911 | Mouse | n/a | region | qtl |
| 1000 | 1357563 | Bmch6_m | bone mechanical trait 6 (mouse) | | | Not determined | | 13 | 55384980 | 89385140 | Mouse | n/a | region | qtl |
| 1000 | 10043997 | Bw40_m | body weight QTL 40 (mouse) | | | Not determined | | 14 | 79239045 | 113239162 | Mouse | n/a | region | qtl |
| 1000 | 1357553 | Cia28_m | collagen induced arthritis 28 (mouse) | | | Not determined | | 13 | 56629249 | 96239162 | Mouse | n/a | region | qtl |
| 1000 | 14700691 | Cisaq1_m | coxsackieviral infection serum ALT QTL 1 (mouse) | | | | | 13 | 86148119 | 120461536 | Mouse | n/a | region | qtl |
| 1000 | 1301610 | Dps1_m | delta power in slow-wave sleep 1 (mouse) | | | Not determined | | 13 | 77195862 | 95730894 | Mouse | n/a | region | qtl |
| 1000 | 4141728 | Egaq4_m | early growth adjusted QTL 4 (mouse) | | | Not determined | | | 87901985 | 112431103 | Mouse | n/a | region | qtl |
| 1000 | 12880402 | Emlq1_m | emotional learning QTL 1 (mouse) | | | | | 13 | 78108858 | 96866553 | Mouse | n/a | region | qtl |
| 1000 | 4140995 | Fbtq6_m | femoral bone trait QTL 6 (mouse) | | | Not determined | | 13 | 86341617 | 120341758 | Mouse | n/a | region | qtl |
| 1000 | 12879495 | Fexq1_m | fear expression QTL 1 (mouse) | | | | | 13 | 78268858 | 95836553 | Mouse | n/a | region | qtl |
| 1000 | 12879496 | Fexq2_m | fear expression QTL 2 (mouse) | | | | | 13 | 100741519 | 120883175 | Mouse | n/a | region | qtl |
| 1000 | 1558763 | Gct9_m | granulosa cell tumorigenesis 9 (mouse) | | | Not determined | | 13 | 95036824 | 120883175 | Mouse | n/a | region | qtl |
| 1000 | 10045623 | Heal18_m | wound healing regeneration 18 (mouse) | | | Not determined | | 13 | 79239045 | 113239162 | Mouse | n/a | region | qtl |
| 1000 | 1301142 | Heal2_m | wound healing/regeneration 2 (mouse) | | | Not determined | | 13 | 93875267 | 120883175 | Mouse | n/a | region | qtl |
| 1000 | 13513920 | Heal57_m | wound healing/ regeneration 57 (mouse) | | | | | 13 | 104450757 | 107073998 | Mouse | n/a | region | qtl |
| 1000 | 1301593 | Heal8_m | wound healing/regeneration 8 (mouse) | | | Not determined | | 13 | 68053999 | 102054119 | Mouse | n/a | region | qtl |
| 1000 | 4141704 | Hipq1_m | hyperinsulin production QTL 1 (mouse) | | | Not determined | | | 110409487 | 119476372 | Mouse | n/a | region | qtl |
| 1000 | 1300939 | Hrtfm6_m | heart failure modifier 6 (mouse) | | | Not determined | | 13 | 91383692 | 120883175 | Mouse | n/a | region | qtl |
| 1000 | 14696726 | Kidrq3_m | kidney weight, right QTL 3 (mouse) | | | | | 13 | 68217066 | 102217066 | Mouse | n/a | region | qtl |
| 1000 | 1301445 | Listr2_m | listeriosis resistance 2 (mouse) | | | Not determined | | 13 | 66744601 | 100744746 | Mouse | n/a | region | qtl |
| 1000 | 14747007 | Mancz11_m | mandible centroid size 11 (mouse) | | | | | 13 | 70111284 | 104111284 | Mouse | n/a | region | qtl |
| 1000 | 14746975 | Manh74_m | mandible shape 74 (mouse) | | | | | 13 | 52477269 | 86477269 | Mouse | n/a | region | qtl |
| 1000 | 14746974 | Manh75_m | mandible shape 75 (mouse) | | | | | 13 | 99386647 | 120883175 | Mouse | n/a | region | qtl |
| 1000 | 4141266 | Mol3_m | modifier of LPS-response 3 (mouse) | | | Not determined | | | 76132600 | 112431103 | Mouse | n/a | region | qtl |
| 1000 | 4142147 | Mvwf4_m | modifier of von Willebrand factor 4 (mouse) | | | Not determined | | | 20477612 | 112898424 | Mouse | n/a | region | qtl |
| 1000 | 13824989 | Pbsq1_m | percent broken sperm QTL 1 (mouse) | | | | | 13 | 102136508 | 112136534 | Mouse | n/a | region | qtl |
| 1000 | 4142465 | Pbwg17_m | postnatal body weight growth 17 (mouse) | | | Not determined | | 13 | 83876060 | 117876256 | Mouse | n/a | region | qtl |
| 1000 | 1302073 | Pgct1_m | primordial germ cell tumor locus 1 (mouse) | | | Not determined | | 13 | 53820783 | 87820897 | Mouse | n/a | region | qtl |
| 1000 | 1357468 | Rplag_m | reduced platelet aggregation (mouse) | | | Not determined | | 13 | 95502130 | 120883175 | Mouse | n/a | region | qtl |
| 1000 | 10412235 | Scgq5_m | spontaneous crescentic glomerulonephritis QTL 5 (mouse) | | | Not determined | | 13 | 36060908 | 96239162 | Mouse | n/a | region | qtl |
| 1000 | 1558741 | Ses10_m | salmonella enteritidis susceptibility 10 (mouse) | | | Not determined | | 13 | 82739968 | 116740106 | Mouse | n/a | region | qtl |
| 1000 | 10402414 | Sgp5_m | serum gp70 production 5 (mouse) | | | Not determined | | 13 | 56470456 | 105422186 | Mouse | n/a | region | qtl |
| 1000 | 1300941 | Skl6_m | skeletal size (tail length) 6 (mouse) | | | Not determined | | 13 | 64250821 | 98250945 | Mouse | n/a | region | qtl |
| 1000 | 4142338 | Skmw18_m | skeletal muscle weight 18 (mouse) | | | Not determined | | 13 | 94528399 | 120883175 | Mouse | n/a | region | qtl |
| 1000 | 25394545 | Skmw77_m | skeletal muscle weight 77, EDL (mouse) | | | | | 13 | 104421423 | 107663775 | Mouse | n/a | region | qtl |
| 1000 | 25394544 | Skmw78_m | skeletal muscle weight 78, gastroc (mouse) | | | | | 13 | 104397730 | 107663775 | Mouse | n/a | region | qtl |
| 1000 | 25394543 | Skmw79_m | skeletal muscle weight 79, soleus (mouse) | | | | | 13 | 103286625 | 107663775 | Mouse | n/a | region | qtl |
| 1000 | 25394542 | Skmw80_m | skeletal muscle weight 80, TA (mouse) | | | | | 13 | 104397730 | 107663775 | Mouse | n/a | region | qtl |
| 1000 | 1301949 | Skull20_m | skull morphology 20 (mouse) | | | Not determined | | 13 | 64250821 | 98250945 | Mouse | n/a | region | qtl |
| 1000 | 4141102 | Sod1m_m | superoxide dismutase 1, soluble, modifier (mouse) | | | Not determined | | | 99739968 | 110699911 | Mouse | n/a | region | qtl |
| 1000 | 4141005 | Ssrq11_m | stress response QTL 11 (mouse) | | | Not determined | | | 117042942 | 118965989 | Mouse | n/a | region | qtl |
| 1000 | 4142334 | Svtms_m | survival time modifier of Sod2 (mouse) | | | Not determined | | 13 | 107613580 | 119476372 | Mouse | n/a | region | qtl |
| 1000 | 4142314 | Tailaq3_m | tail length adjusted QTL 3 (mouse) | | | Not determined | | | 55720354 | 112431103 | Mouse | n/a | region | qtl |
| 1000 | 4142241 | Tailq3_m | tail length QTL 3 (mouse) | | | Not determined | | | 55720354 | 112431103 | Mouse | n/a | region | qtl |
| 1000 | 1300876 | Tanidd2_m | tally ho associated non-insulin dependednt diabetes mellitus 2 (mouse) | | | Not determined | | 13 | 91965303 | 120883175 | Mouse | n/a | region | qtl |
| 1000 | 4141826 | Tbqt5_m | tibia bone quality traits 5 (mouse) | | | Not determined | | 13 | 103341617 | 117043216 | Mouse | n/a | region | qtl |
| 1000 | 4142400 | Tgq24_m | triglyceride QTL 24 (mouse) | | | Not determined | | | 102602630 | 120883175 | Mouse | n/a | region | qtl |
| 1000 | 12880414 | V125Dq10_m | vitamin D active form serum level QTL 10 (mouse) | | | | | 13 | 78036508 | 112036508 | Mouse | n/a | region | qtl |
| 1000 | 4140959 | W10q17_m | weight 10 weeks QTL 17 (mouse) | | | Not determined | | | 55720354 | 112431103 | Mouse | n/a | region | qtl |
| 1000 | 4141992 | W6q16_m | weight 6 weeks QTL 16 (mouse) | | | Not determined | | | 55720354 | 112431103 | Mouse | n/a | region | qtl |
| 1000 | 10412163 | Wra1_m | wheel running activity 1 (mouse) | | | Not determined | | 13 | 59132600 | 93132738 | Mouse | n/a | region | qtl |