| 1000 | 8694194 | Abfw1 | Abdominal fat weight QTL 1 | 11.7 | 0.001 | visceral adipose mass (VT:0010063) | abdominal fat pad weight to body weight ratio (CMO:0000095) | 2 | 197253963 | 242253963 | Rat | n/a | region | qtl |
| 1000 | 2307174 | Activ3 | Activity QTL 3 | 4.83 | 0.000058 | locomotor behavior trait (VT:0001392) | number of entries into a discrete space in an experimental apparatus (CMO:0000960) | 2 | 183984665 | 228984665 | Rat | n/a | region | qtl |
| 1000 | 738013 | Alc15 | Alcohol consumption QTL 15 | 4.1 | 0.00022 | consumption behavior trait (VT:0002069) | ethanol drink intake rate to body weight ratio (CMO:0001616) | 2 | 199380312 | 244380312 | Rat | n/a | region | qtl |
| 1000 | 70202 | Alc19 | Alcohol consumption QTL 19 | 2.5 | | drinking behavior trait (VT:0001422) | ethanol intake volume to total fluid intake volume ratio (CMO:0001591) | 3 | 1 | 28136884 | Rat | n/a | region | qtl |
| 1000 | 8693641 | Alc30 | Alcohol consumption QTL 30 | 2 | 0.739 | drinking behavior trait (VT:0001422) | calculated ethanol drink intake rate (CMO:0001615) | 3 | 5654639 | 25105730 | Rat | n/a | region | qtl |
| 1000 | 631831 | Alc8 | Alcohol consumption QTL 8 | 2.7 | | consumption behavior trait (VT:0002069) | calculated ethanol drink intake rate (CMO:0001615) | 3 | 1 | 32972944 | Rat | n/a | region | qtl |
| 1000 | 1641891 | Alcrsp17 | Alcohol response QTL 17 | | | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 2 | 155965557 | 254121739 | Rat | n/a | region | qtl |
| 1000 | 1641925 | Alcrsp2 | Alcohol response QTL 2 | | | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 2 | 155965557 | 237742948 | Rat | n/a | region | qtl |
| 1000 | 12879853 | Am5 | Aortic mass QTL 5 | | 0.001 | aorta mass (VT:0002845) | aorta weight to aorta length to body weight ratio (CMO:0002722) | 3 | 14090411 | 48562146 | Rat | n/a | region | qtl |
| 1000 | 1598835 | Anxrr18 | Anxiety related response QTL 18 | 2.98 | | body movement coordination trait (VT:0005424) | number of rearing movements in an experimental apparatus (CMO:0001752) | 2 | 217743855 | 262743855 | Rat | n/a | region | qtl |
| 1000 | 1298526 | Arunc3 | Aerobic running capacity QTL 3 | 2.2 | | exercise endurance trait (VT:0002332) | maximum distance run on treadmill (CMO:0001406) | 3 | 2631421 | 33477544 | Rat | n/a | region | qtl |
| 1000 | 1554319 | Bmd2 | Bone mineral density QTL 2 | 13.4 | 0.0001 | lumbar vertebra area (VT:0010570) | lumbar vertebra cross-sectional area (CMO:0001689) | 2 | 118446793 | 228582621 | Rat | n/a | region | qtl |
| 1000 | 2300189 | Bmd48 | Bone mineral density QTL 48 | 5.8 | 0.0001 | femur mineral mass (VT:0010011) | volumetric bone mineral density (CMO:0001553) | 2 | 194378622 | 239378622 | Rat | n/a | region | qtl |
| 1000 | 61458 | Bp10 | Blood pressure QTL 10 | 3.42 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 204003742 | 231132207 | Rat | n/a | region | qtl |
| 1000 | 631507 | Bp105 | Blood pressure QTL 105 | | 0.001 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 2 | 116075644 | 228737869 | Rat | n/a | region | qtl |
| 1000 | 634306 | Bp140 | Blood pressure QTL 140 | 3.3 | 0.0013 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 13126914 | 36600143 | Rat | n/a | region | qtl |
| 1000 | 634306 | Bp140 | Blood pressure QTL 140 | 3.3 | 0.0013 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 13126914 | 36600143 | Rat | n/a | region | qtl |
| 1000 | 634306 | Bp140 | Blood pressure QTL 140 | 3.3 | 0.0013 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 3 | 13126914 | 36600143 | Rat | n/a | region | qtl |
| 1000 | 634306 | Bp140 | Blood pressure QTL 140 | 3.3 | 0.0013 | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 3 | 13126914 | 36600143 | Rat | n/a | region | qtl |
| 1000 | 634306 | Bp140 | Blood pressure QTL 140 | 3.3 | 0.0013 | arterial blood pressure trait (VT:2000000) | heart rate (CMO:0000002) | 3 | 13126914 | 36600143 | Rat | n/a | region | qtl |
| 1000 | 634306 | Bp140 | Blood pressure QTL 140 | 3.3 | 0.0013 | arterial blood pressure trait (VT:2000000) | heart rate (CMO:0000002) | 3 | 13126914 | 36600143 | Rat | n/a | region | qtl |
| 1000 | 634306 | Bp140 | Blood pressure QTL 140 | 3.3 | 0.0013 | arterial blood pressure trait (VT:2000000) | body weight (CMO:0000012) | 3 | 13126914 | 36600143 | Rat | n/a | region | qtl |
| 1000 | 634306 | Bp140 | Blood pressure QTL 140 | 3.3 | 0.0013 | arterial blood pressure trait (VT:2000000) | body weight (CMO:0000012) | 3 | 13126914 | 36600143 | Rat | n/a | region | qtl |
| 1000 | 61468 | Bp15 | Blood pressure QTL 15 | 4.4 | | blood pressure trait (VT:0000183) | diastolic blood pressure (CMO:0000005) | 3 | 1 | 28500807 | Rat | n/a | region | qtl |
| 1000 | 61468 | Bp15 | Blood pressure QTL 15 | 4.4 | | blood pressure trait (VT:0000183) | systolic blood pressure (CMO:0000004) | 3 | 1 | 28500807 | Rat | n/a | region | qtl |
| 1000 | 61468 | Bp15 | Blood pressure QTL 15 | 4.4 | | blood pressure trait (VT:0000183) | pulse pressure (CMO:0000292) | 3 | 1 | 28500807 | Rat | n/a | region | qtl |
| 1000 | 731172 | Bp151 | Blood pressure QTL 151 | | 0.04 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 14090411 | 48562146 | Rat | n/a | region | qtl |
| 1000 | 1298083 | Bp158 | Blood pressure QTL 158 | 2.62 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 204003742 | 231132207 | Rat | n/a | region | qtl |
| 1000 | 61469 | Bp16 | Blood pressure QTL 16 | 5.64 | | arterial blood pressure trait (VT:2000000) | blood pressure measurement (CMO:0000003) | 2 | 184730446 | 229730446 | Rat | n/a | region | qtl |
| 1000 | 1331794 | Bp202 | Blood pressure QTL 202 | 3.66819 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 147122993 | 240020001 | Rat | n/a | region | qtl |
| 1000 | 1331745 | Bp203 | Blood pressure QTL 203 | 4.377 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 2 | 204585642 | 235290110 | Rat | n/a | region | qtl |
| 1000 | 1331734 | Bp204 | Blood pressure QTL 204 | 3.61192 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 2 | 181990297 | 240020001 | Rat | n/a | region | qtl |
| 1000 | 1354648 | Bp239 | Blood pressure QTL 239 | | 0.001 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 66828236 | 243550655 | Rat | n/a | region | qtl |
| 1000 | 1358885 | Bp251 | Blood pressure QTL 251 | 3.8 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 10639528 | 127023997 | Rat | n/a | region | qtl |
| 1000 | 1358888 | Bp264 | Blood pressure QTL 264 | 4.43 | | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 10639528 | 127023997 | Rat | n/a | region | qtl |
| 1000 | 1359031 | Bp275 | Blood pressure QTL 275 | | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 200453324 | 236318668 | Rat | n/a | region | qtl |
| 1000 | 1359031 | Bp275 | Blood pressure QTL 275 | | | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 2 | 200453324 | 236318668 | Rat | n/a | region | qtl |
| 1000 | 1598838 | Bp290 | Blood pressure QTL 290 | 1.9 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 181522444 | 226522444 | Rat | n/a | region | qtl |
| 1000 | 2306901 | Bp337 | Blood pressure QTL 337 | | 0.01 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 177680772 | 243901375 | Rat | n/a | region | qtl |
| 1000 | 2325840 | Bp345 | Blood pressure QTL 345 | | 0.001 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 14090411 | 29084626 | Rat | n/a | region | qtl |
| 1000 | 10755499 | Bp389 | Blood pressure QTL 389 | 2.61 | | arterial blood pressure trait (VT:2000000) | diastolic blood pressure (CMO:0000005) | 2 | 16679272 | 245624402 | Rat | n/a | region | qtl |
| 1000 | 61398 | Bp50 | Blood pressure QTL 50 | 4.4 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 2 | 204585642 | 249585642 | Rat | n/a | region | qtl |
| 1000 | 70162 | Bp63 | Blood pressure QTL 63 | 5.64 | | arterial blood pressure trait (VT:2000000) | blood pressure measurement (CMO:0000003) | 2 | 184730446 | 229730446 | Rat | n/a | region | qtl |
| 1000 | 631545 | Bp85 | Blood pressure QTL 85 | 3.1 | | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 1 | 28500807 | Rat | n/a | region | qtl |
| 1000 | 631568 | Bp92 | Blood pressure QTL 92 | 2.2 | 0.005 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 13126914 | 41510346 | Rat | n/a | region | qtl |
| 1000 | 70191 | BpQTLcluster4 | Blood pressure QTL cluster 4 | 3 | | arterial blood pressure trait (VT:2000000) | absolute change in mean arterial blood pressure (CMO:0000533) | 3 | 6000748 | 51687917 | Rat | n/a | region | qtl |
| 1000 | 70191 | BpQTLcluster4 | Blood pressure QTL cluster 4 | 3 | | arterial blood pressure trait (VT:2000000) | absolute change in systolic blood pressure (CMO:0000607) | 3 | 6000748 | 51687917 | Rat | n/a | region | qtl |
| 1000 | 1578648 | Bss11 | Bone structure and strength QTL 11 | 4.7 | | femur morphology trait (VT:0000559) | femoral neck cortical cross-sectional area (CMO:0001702) | 2 | 118446646 | 227707979 | Rat | n/a | region | qtl |
| 1000 | 4889966 | Bss95 | Bone structure and strength QTL 95 | 4.4 | | tibia area (VT:1000281) | tibia-fibula cross-sectional area (CMO:0001718) | 3 | 1 | 37891710 | Rat | n/a | region | qtl |
| 1000 | 6893355 | Bw101 | Body weight QTL 101 | 0.4 | 0.38 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 6000748 | 34394365 | Rat | n/a | region | qtl |
| 1000 | 6893363 | Bw105 | Body weight QTL 105 | 2.6 | 0.0036 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 6000748 | 34394365 | Rat | n/a | region | qtl |
| 1000 | 8694383 | Bw158 | Body weight QTL 158 | 7.69 | 0.001 | body lean mass (VT:0010483) | lean tissue morphological measurement (CMO:0002184) | 2 | 197253963 | 242253963 | Rat | n/a | region | qtl |
| 1000 | 8694435 | Bw166 | Body weight QTL 166 | 14.08 | 0.001 | retroperitoneal fat pad mass (VT:0010430) | retroperitoneal fat pad weight to body weight ratio (CMO:0000635) | 2 | 197253963 | 242253963 | Rat | n/a | region | qtl |
| 1000 | 12879849 | Bw180 | Body weight QTL 180 | | 0.037 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 14090411 | 48562146 | Rat | n/a | region | qtl |
| 1000 | 1558654 | Bw56 | Body weight QTL 56 | 4.5 | 0.0000171 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 6000748 | 34394365 | Rat | n/a | region | qtl |
| 1000 | 61417 | Cia10 | Collagen induced arthritis QTL 10 | 3.4 | | joint integrity trait (VT:0010548) | experimental arthritis severity measurement (CMO:0001459) | 2 | 194998627 | 239998627 | Rat | n/a | region | qtl |
| 1000 | 631679 | Cm10 | Cardiac mass QTL 10 | 7.34 | 0.0001 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 3 | 1 | 25786001 | Rat | n/a | region | qtl |
| 1000 | 1331805 | Cm29 | Cardiac mass QTL 29 | 3.50746 | | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 2 | 147122993 | 240020001 | Rat | n/a | region | qtl |
| 1000 | 1558657 | Cm43 | Cardiac mass QTL 43 | 6.6 | 0.0000000293 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 3 | 6000866 | 34394121 | Rat | n/a | region | qtl |
| 1000 | 1558647 | Cm46 | Cardiac mass QTL 46 | 5.4 | 0.0000055 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 3 | 6000866 | 34394121 | Rat | n/a | region | qtl |
| 1000 | 1558650 | Cm48 | Cardiac mass QTL 48 | 4 | 0.0001 | heart mass (VT:0007028) | heart weight to body weight ratio (CMO:0000074) | 3 | 6000866 | 34394121 | Rat | n/a | region | qtl |
| 1000 | 631676 | Cm8 | Cardiac mass QTL 8 | 7.03 | 0.0001 | aorta mass (VT:0002845) | aorta weight (CMO:0000076) | 3 | 18023664 | 63023664 | Rat | n/a | region | qtl |
| 1000 | 12879850 | Cm91 | Cardiac mass QTL 91 | | 0.001 | heart mass (VT:0007028) | heart wet weight to body weight ratio (CMO:0002408) | 3 | 14090411 | 48562146 | Rat | n/a | region | qtl |
| 1000 | 12879851 | Cm92 | Cardiac mass QTL 92 | | 0.001 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 3 | 14090411 | 48562146 | Rat | n/a | region | qtl |
| 1000 | 12879852 | Cm93 | Cardiac mass QTL 93 | | 0.001 | heart right ventricle mass (VT:0007033) | heart right ventricle weight to body weight ratio (CMO:0000914) | 3 | 14090411 | 48562146 | Rat | n/a | region | qtl |
| 1000 | 2298479 | Eau5 | Experimental allergic uveoretinitis QTL 5 | | 0.0021 | uvea integrity trait (VT:0010551) | experimental autoimmune uveitis score (CMO:0001504) | 2 | 217498545 | 254132424 | Rat | n/a | region | qtl |
| 1000 | 1581499 | Esta2 | Estrogen-induced thymic atrophy QTL 2 | | | thymus mass (VT:0004954) | thymus wet weight (CMO:0000855) | 2 | 204585642 | 243689611 | Rat | n/a | region | qtl |
| 1000 | 70203 | Gcr2 | Gastric cancer resistance QTL 2 | 2.6 | | stomach morphology trait (VT:0000470) | stomach tumor susceptibility score (CMO:0002043) | 3 | 3285929 | 28136884 | Rat | n/a | region | qtl |
| 1000 | 2317752 | Glom23 | Glomerulus QTL 23 | 3.6 | | urine protein amount (VT:0005160) | urine protein level (CMO:0000591) | 2 | 208594330 | 263179188 | Rat | n/a | region | qtl |
| 1000 | 631203 | Gluco14 | Glucose level QTL 14 | | 0.0001 | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 2 | 221880206 | 235570970 | Rat | n/a | region | qtl |
| 1000 | 1358905 | Hrtrt17 | Heart rate QTL 17 | 5.9 | 0.000014 | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 3 | 10094081 | 93415837 | Rat | n/a | region | qtl |
| 1000 | 2293084 | Iddm26 | Insulin dependent diabetes mellitus QTL 26 | 2.9 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 2 | 188838511 | 228984665 | Rat | n/a | region | qtl |
| 1000 | 61366 | Iddm3 | Insulin dependent diabetes mellitus QTL 3 | 4.7 | | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 2 | 204585642 | 249585642 | Rat | n/a | region | qtl |
| 1000 | 2299161 | Iddm33 | Insulin dependent diabetes mellitus QTL 33 | 2.98 | | blood glucose amount (VT:0000188) | age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140) | 2 | 221488355 | 254121739 | Rat | n/a | region | qtl |
| 1000 | 1354622 | Kidm16 | Kidney mass QTL 16 | 3 | | kidney mass (VT:0002707) | left kidney wet weight (CMO:0000083) | 2 | 83819608 | 239166203 | Rat | n/a | region | qtl |
| 1000 | 1354649 | Kidm17 | Kidney mass QTL 17 | 2.9 | | kidney mass (VT:0002707) | calculated kidney weight (CMO:0000160) | 2 | 83819608 | 243901375 | Rat | n/a | region | qtl |
| 1000 | 2301408 | Kidm36 | Kidney mass QTL 36 | | 0.002 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 2 | 205583921 | 243562243 | Rat | n/a | region | qtl |
| 1000 | 10401810 | Kidm53 | Kidney mass QTL 53 | | | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 3 | 2631421 | 48562146 | Rat | n/a | region | qtl |
| 1000 | 12879854 | Kidm63 | Kidney mass QTL 63 | | 0.001 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 3 | 14090411 | 48562146 | Rat | n/a | region | qtl |
| 1000 | 1598813 | Memor9 | Memory QTL 9 | 2.7 | | exploratory behavior trait (VT:0010471) | average horizontal distance in proximity to the target during voluntary locomotion in an experimental apparatus (CMO:0002674) | 2 | 214870793 | 251212353 | Rat | n/a | region | qtl |
| 1000 | 2298542 | Neuinf11 | Neuroinflammation QTL 11 | 3.9 | | nervous system integrity trait (VT:0010566) | spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126) | 3 | 10119318 | 79772001 | Rat | n/a | region | qtl |
| 1000 | 1359022 | Ppulsi1 | Prepulse inhibition QTL 1 | 3.63 | | prepulse inhibition trait (VT:0003088) | acoustic startle response measurement (CMO:0001519) | 2 | 142053350 | 228984665 | Rat | n/a | region | qtl |
| 1000 | 634308 | Sach6 | Saccharin preference QTL 6 | 4.9 | | taste sensitivity trait (VT:0001986) | saccharin intake volume to total fluid intake volume ratio (CMO:0001601) | 2 | 116075644 | 228737869 | Rat | n/a | region | qtl |
| 1000 | 9589044 | Scfw1 | Subcutaneous fat weight QTL 1 | 5.8 | 0.001 | subcutaneous adipose mass (VT:1000472) | abdominal subcutaneous fat pad weight (CMO:0002069) | 2 | 197253963 | 242253963 | Rat | n/a | region | qtl |
| 1000 | 2290452 | Scl56 | Serum cholesterol level QTL 56 | 2.26 | | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 3 | 1 | 95176874 | Rat | n/a | region | qtl |
| 1000 | 2312664 | Scl62 | Serum cholesterol level QTL 62 | | 0.05 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 3 | 1 | 39773425 | Rat | n/a | region | qtl |
| 1000 | 1358356 | Srcrt1 | Stress Responsive Cort QTL1 | 3.66 | | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 2 | 175403337 | 239166203 | Rat | n/a | region | qtl |
| 1000 | 1358357 | Srcrtb1 | Stress Responsive Cort Basal QTL 1 | 6.36 | 0.002 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 3 | 3285929 | 28136884 | Rat | n/a | region | qtl |
| 1000 | 1302789 | Stl26 | Serum triglyceride level QTL 26 | 3.1 | 0.0035 | blood triglyceride amount (VT:0002644) | plasma triglyceride level (CMO:0000548) | 2 | 218957047 | 240977220 | Rat | n/a | region | qtl |
| 1000 | 724568 | Uae13 | Urinary albumin excretion QTL 13 | 4.4 | | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 2 | 149114878 | 225501939 | Rat | n/a | region | qtl |
| 1000 | 8662832 | Vetf7 | Vascular elastic tissue fragility QTL 7 | 3.5 | | aorta elastin amount (VT:0003905) | aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002) | 2 | 83754907 | 237610852 | Rat | n/a | region | qtl |
| 1000 | 8662843 | Vetf9 | Vascular elastic tissue fragility QTL 9 | 2.05 | | thoracic aorta molecular composition trait (VT:0010568) | aorta wall extracellular elastin dry weight to aorta wall extracellular collagen weight ratio (CMO:0002003) | 2 | 169852670 | 243026643 | Rat | n/a | region | qtl |