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| Relevance | RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | Annotations | Match | Type |
| 1000 | 1358885 | Bp251 | Blood pressure QTL 251 | 3.8 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 10639528 | 127023997 | Rat | n/a | region | qtl | |
| 1000 | 1358888 | Bp264 | Blood pressure QTL 264 | 4.43 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 3 | 10639528 | 127023997 | Rat | n/a | region | qtl | |
| 1000 | 737818 | Hcar12 | Hepatocarcinoma resistance QTL 12 | 2.6 | liver integrity trait (VT:0010547) | volume of individual liver tumorous lesion (CMO:0001078) | 3 | 30114912 | 123700444 | Rat | n/a | region | qtl | |
| 1000 | 70216 | Cm14 | Cardiac mass QTL 14 | 2.1 | heart mass (VT:0007028) | heart wet weight (CMO:0000069) | 3 | 30846101 | 172879276 | Rat | n/a | region | qtl | |
| 1000 | 1358362 | Srcrt2 | Stress Responsive Cort QTL 2 | 2.78 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 3 | 39248391 | 140271184 | Rat | n/a | region | qtl | |
| 1000 | 2301970 | Bw81 | Body weight QTL 81 | 5.19 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 43295930 | 163640485 | Rat | n/a | region | qtl | |
| 1000 | 2301971 | Cm71 | Cardiac mass QTL 71 | 4.63 | heart left ventricle mass (VT:0007031) | heart left ventricle weight (CMO:0000776) | 3 | 43295930 | 163640485 | Rat | n/a | region | qtl | |
| 1000 | 1581503 | Cm58 | Cardiac mass QTL 58 | 2.7 | 0.05 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 3 | 45406058 | 127023997 | Rat | n/a | region | qtl |
| 1000 | 1559282 | Emca5 | Estrogen-induced mammary cancer QTL 5 | 3.9 | mammary gland integrity trait (VT:0010552) | percentage of study population developing mammary tumors during a period of time (CMO:0000948) | 3 | 45406058 | 177699992 | Rat | n/a | region | qtl | |
| 1000 | 2292591 | Esta4 | Estrogen-induced thymic atrophy QTL 4 | thymus mass (VT:0004954) | thymus wet weight (CMO:0000855) | 3 | 48561928 | 155263151 | Rat | n/a | region | qtl | ||
| 1000 | 2292613 | Ept16 | Estrogen-induced pituitary tumorigenesis QTL 16 | 8.3 | pituitary gland mass (VT:0010496) | pituitary gland wet weight (CMO:0000853) | 3 | 48562146 | 115249962 | Rat | n/a | region | qtl | |
| 1000 | 1358186 | Ept2 | Estrogen-induced pituitary tumorigenesis QTL 2 | 8.3 | pituitary gland mass (VT:0010496) | pituitary gland wet weight (CMO:0000853) | 3 | 48562146 | 115249962 | Rat | n/a | region | qtl | |
| 1000 | 631665 | Bw8 | Body weight QTL 8 | 5.5 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 51821836 | 124513579 | Rat | n/a | region | qtl | |
| 1000 | 724523 | Tsu1 | Thymus enlargement suppressive QTL 1 | 3.84 | thymus mass (VT:0004954) | thymus weight to body weight ratio (CMO:0000612) | 3 | 51822008 | 120917851 | Rat | n/a | region | qtl | |
| 1000 | 1582238 | Bw68 | Body weight QTL 68 | 3.2 | 0.0064 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 54630948 | 119830094 | Rat | n/a | region | qtl |
| 1000 | 1582218 | Bw74 | Body weight QTL 74 | 3.9 | 0.0021 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 54630948 | 119830094 | Rat | n/a | region | qtl |
| 1000 | 1582239 | Epfw1 | Epididymal fat weight QTL 1 | 4.5 | 0.0006 | epididymal fat pad mass (VT:0010421) | epididymal fat pad weight to body weight ratio (CMO:0000658) | 3 | 54630948 | 119830094 | Rat | n/a | region | qtl |
| 1000 | 1581568 | Rf53 | Renal function QTL 53 | total urine protein amount (VT:0000032) | urine protein excretion rate to body weight ratio (CMO:0001099) | 3 | 58204463 | 170534769 | Rat | n/a | region | qtl | ||
| 1000 | 8662816 | Vetf4 | Vascular elastic tissue fragility QTL 4 | 4 | renal artery integrity trait (VT:0010642) | number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563) | 3 | 61241033 | 165369047 | Rat | n/a | region | qtl | |
| 1000 | 1300111 | Rf12 | Renal function QTL 12 | 3.78 | renal blood flow trait (VT:2000006) | absolute change in renal blood flow rate (CMO:0001168) | 3 | 62922868 | 127023997 | Rat | n/a | region | qtl | |
| 1000 | 1582210 | Bw71 | Body weight QTL 71 | 3.3 | 0.0012 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 66711607 | 119830094 | Rat | n/a | region | qtl |
| 1000 | 1582221 | Kidm30 | Kidney mass QTL 30 | 3.5 | 0.0008 | kidney mass (VT:0002707) | both kidneys wet weight (CMO:0000085) | 3 | 66711607 | 119830094 | Rat | n/a | region | qtl |
| 1000 | 12879848 | Bw181 | Body weght QTL 181 | 0.015 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 72672290 | 127023997 | Rat | n/a | region | qtl | |
| 1000 | 2301414 | Kidm37 | Kidney mass QTL 37 | 0.001 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 3 | 72973445 | 127023997 | Rat | n/a | region | qtl | |
| 1000 | 1600376 | Arunc5 | Aerobic running capacity QTL 5 | 0.21 | exercise endurance trait (VT:0002332) | maximum distance run on treadmill (CMO:0001406) | 3 | 78700444 | 123700444 | Rat | n/a | region | qtl | |
| 1000 | 1581546 | Pur13 | Proteinuria QTL 13 | 2.93 | 0.0335 | total urine protein amount (VT:0000032) | urine protein excretion rate (CMO:0000759) | 3 | 81136227 | 154416635 | Rat | n/a | region | qtl |
| 1000 | 2302273 | Gluco35 | Glucose level QTL 35 | 5.3 | 0.001 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 3 | 83817637 | 119509260 | Rat | n/a | region | qtl |
| 1000 | 7387306 | Bw124 | Body weight QTL 124 | 3.2 | 0.0003 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 88910015 | 133910015 | Rat | n/a | region | qtl |
| 1000 | 631649 | Bp123 | Blood pressure QTL 123 | 3.2 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 3 | 94788365 | 139788365 | Rat | n/a | region | qtl | |
| 1000 | 8694437 | Bw167 | Body weight QTL 167 | 22.46 | 0.001 | retroperitoneal fat pad mass (VT:0010430) | retroperitoneal fat pad weight to body weight ratio (CMO:0000635) | 3 | 97009185 | 142009185 | Rat | n/a | region | qtl |
| 1000 | 631841 | Niddm39 | Non-insulin dependent diabetes mellitus QTL 39 | 3.36 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 3 | 99465522 | 168732722 | Rat | n/a | region | qtl | |
| 1000 | 1582219 | Bw63 | Body weight QTL 63 | 3.8 | 0.001 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 100730984 | 119830094 | Rat | n/a | region | qtl |
| 1000 | 724532 | Cm17 | Cardiac mass QTL 17 | 2 | heart mass (VT:0007028) | calculated heart weight (CMO:0000073) | 3 | 101058963 | 146058963 | Rat | n/a | region | qtl | |
| 1000 | 2293087 | Iddm27 | Insulin dependent diabetes mellitus QTL 27 | 2.68 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 3 | 102152812 | 155263151 | Rat | n/a | region | qtl | |
| 1000 | 1354611 | Despr2 | Despair related QTL 2 | 3.03 | 0.0028 | locomotor behavior trait (VT:0001392) | amount of time spent in voluntary immobility (CMO:0001043) | 3 | 102466149 | 147466149 | Rat | n/a | region | qtl |
| 1000 | 2312670 | Bw94 | Body weight QTL 94 | 0.01 | inguinal fat pad mass (VT:0010424) | inguinal fat pad weight to body weight ratio (CMO:0001253) | 3 | 103141814 | 176418101 | Rat | n/a | region | qtl | |
| 1000 | 2312673 | Scl63 | Serum cholesterol level QTL 63 | 0.001 | blood cholesterol amount (VT:0000180) | serum total cholesterol level (CMO:0000363) | 3 | 103141814 | 176418101 | Rat | n/a | region | qtl | |
| 1000 | 2312659 | Slep7 | Serum leptin concentration QTL 7 | 0.001 | blood leptin amount (VT:0005667) | serum leptin level (CMO:0000780) | 3 | 103141814 | 176418101 | Rat | n/a | region | qtl | |
| 1000 | 2302373 | Gluco39 | Glucose level QTL 39 | 5.01 | blood glucose amount (VT:0000188) | blood glucose level area under curve (AUC) (CMO:0000350) | 3 | 103141944 | 170934860 | Rat | n/a | region | qtl | |
| 1000 | 1582216 | Bw65 | Body weight QTL 65 | 6.3 | body mass (VT:0001259) | body weight (CMO:0000012) | 3 | 106900427 | 119830094 | Rat | n/a | region | qtl | |
| 1000 | 70212 | Niddm25 | Non-insulin dependent diabetes mellitus QTL 25 | 3.54 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 5 | 1 | 136640934 | Rat | n/a | region | qtl | |
| 1000 | 1331756 | Rf34 | Renal function QTL 34 | 4.16275 | kidney blood vessel physiology trait (VT:0100012) | absolute change in renal blood flow rate (CMO:0001168) | 5 | 1 | 93273395 | Rat | n/a | region | qtl | |
| 1000 | 1331771 | Rf35 | Renal function QTL 35 | 4.36965 | kidney blood vessel physiology trait (VT:0100012) | absolute change in renal blood flow rate (CMO:0001168) | 5 | 1 | 89432042 | Rat | n/a | region | qtl | |
| 1000 | 1576314 | Eutr1 | Estrogen induced uterine response QTL 1 | uterus integrity trait (VT:0010575) | pyometritis severity score (CMO:0002009) | 5 | 1525098 | 78720537 | Rat | n/a | region | qtl | ||
| 1000 | 8662454 | Vetf3 | Vascular elastic tissue fragility QTL 3 | 27.4 | artery integrity trait (VT:0010639) | number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562) | 5 | 1666587 | 71552720 | Rat | n/a | region | qtl | |
| 1000 | 1300117 | Hrtrt8 | Heart rate QTL 8 | 3.49 | heart pumping trait (VT:2000009) | heart rate (CMO:0000002) | 5 | 3251329 | 48722188 | Rat | n/a | region | qtl | |
| 1000 | 61462 | Niddm10 | Non-insulin dependent diabetes mellitus QTL 10 | 3.9 | 0.001 | blood glucose amount (VT:0000188) | plasma glucose level (CMO:0000042) | 5 | 4525738 | 47978104 | Rat | n/a | region | qtl |
| 1000 | 2293666 | Bmd38 | Bone mineral density QTL 38 | 4.4 | femur size trait (VT:1000369) | femoral neck cortical cross-sectional area (CMO:0001702) | 5 | 8632285 | 53632285 | Rat | n/a | region | qtl | |
| 1000 | 7394712 | Emca13 | Estrogen-induced mammary cancer QTL 13 | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 5 | 9514842 | 103580403 | Rat | n/a | region | qtl | ||
| 1000 | 634305 | Mamtr1 | Mammary tumor resistance QTL 1 | 0.0001 | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 5 | 12651967 | 117554267 | Rat | n/a | region | qtl | |
| 1000 | 1641903 | Alcrsp3 | Alcohol response QTL 3 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 5 | 13288888 | 58288888 | Rat | n/a | region | qtl | ||
| 1000 | 1600358 | Mamtr5 | Mammary tumor resistance QTL 5 | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 5 | 18847913 | 63847913 | Rat | n/a | region | qtl | ||
| 1000 | 1358353 | Srcrtb2 | Stress Responsive Cort Basal QTL 2 | 3.48 | 0.003 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 5 | 18847913 | 76608178 | Rat | n/a | region | qtl |
| 1000 | 8552954 | Pigfal14 | Plasma insulin-like growth factor 1 level QTL 14 | 9 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 5 | 21904363 | 66904363 | Rat | n/a | region | qtl | |
| 1000 | 1549901 | Neudeg2 | Neurodegradation QTL 2 | 4 | 0 | nervous system integrity trait (VT:0010566) | mononuclear cell count (CMO:0002119) | 5 | 24956212 | 44747071 | Rat | n/a | region | qtl |
| 1000 | 1578767 | Stresp17 | Stress response QTL 17 | 4.3 | 0.01 | blood aldosterone amount (VT:0005346) | plasma aldosterone level (CMO:0000551) | 5 | 29078899 | 74078899 | Rat | n/a | region | qtl |
| 1000 | 1578776 | Stresp18 | Stress response QTL 18 | 2.9 | thymus mass (VT:0004954) | thymus wet weight (CMO:0000855) | 5 | 29078899 | 74078899 | Rat | n/a | region | qtl | |
| 1000 | 6903306 | Scl35 | Serum cholesterol QTL 35 | 2.6 | 0.0073 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 5 | 29641661 | 74641661 | Rat | n/a | region | qtl |
| 1000 | 6903292 | Stl28 | Serum triglyceride level QTL 28 | 2.6 | 0.0073 | blood triglyceride amount (VT:0002644) | plasma triglyceride level (CMO:0000548) | 5 | 29641661 | 74641661 | Rat | n/a | region | qtl |
| 1000 | 2290448 | Scl54 | Serum cholesterol level QTL 54 | 2.93 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 5 | 31926122 | 136640934 | Rat | n/a | region | qtl | |
| 1000 | 1598807 | Glom12 | Glomerulus QTL 12 | 2.7 | kidney glomerulus morphology trait (VT:0005325) | index of glomerular damage (CMO:0001135) | 5 | 34402409 | 79402409 | Rat | n/a | region | qtl | |
| 1000 | 1302786 | Kidm8 | Kidney mass QTL 8 | 28.15 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 5 | 34402409 | 79402409 | Rat | n/a | region | qtl | |
| 1000 | 1298067 | Scl15 | Serum cholesterol level QTL 15 | 4.8 | 0.001 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 5 | 34402409 | 79402409 | Rat | n/a | region | qtl |
| 1000 | 1576317 | Eutr2 | Estrogen induced uterine response QTL 2 | 0.01 | uterus integrity trait (VT:0010575) | pyometritis severity score (CMO:0002009) | 5 | 35225432 | 108092802 | Rat | n/a | region | qtl | |
| 1000 | 2316959 | Gluco59 | Glucose level QTL 59 | 4.7 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 5 | 35661945 | 117554267 | Rat | n/a | region | qtl | |
| 1000 | 1641912 | Alcrsp18 | Alcohol response QTL 18 | response to alcohol trait (VT:0010489) | duration of loss of righting reflex (CMO:0002289) | 5 | 35788756 | 147487820 | Rat | n/a | region | qtl | ||
| 1000 | 1641922 | Alcrsp8 | Alcohol response QTL 8 | alcohol metabolism trait (VT:0015089) | blood ethanol level (CMO:0000535) | 5 | 35788756 | 70742105 | Rat | n/a | region | qtl | ||
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