| 1000 | 40953092 | Nid2-ps12 | nidogen 2, pseudogene 12 | | 4 | 35914 | 55279 | Rat | n/a | Region | gene |
| 999 | 9345060 | Ervkl-ps1 | endogenous retrovirus group K like, pseudogene 1 | | 4 | 115173 | 117996 | Rat | n/a | Region | gene |
| 998 | 41235420 | Ube2v1-ps12 | ubiquitin conjugating enzyme E2 V1, pseudogene 12 | | 4 | 194145 | 195559 | Rat | n/a | Region | gene |
| 997 | 41246724 | LOC120102192 | uncharacterized LOC120102192 | | 4 | 362232 | 376265 | Rat | n/a | Region | gene |
| 996 | 41140831 | LOC120102190 | uncharacterized LOC120102190 | | 4 | 479781 | 509877 | Rat | n/a | Region | gene |
| 995 | 41231670 | Ube2v1-ps18 | ubiquitin conjugating enzyme E2 V1, pseudogene 18 | | 4 | 482975 | 484423 | Rat | n/a | Region | gene |
| 994 | 41088472 | LOC120102591 | 5.8S ribosomal RNA | | 4 | 494813 | 494965 | Rat | n/a | Region | gene |
| 993 | 41248797 | LOC120102761 | 5.8S ribosomal RNA | | 4 | 598721 | 598874 | Rat | n/a | Region | gene |
| 992 | 7658986 | LOC102555256 | uncharacterized LOC102555256 | | 4 | 605174 | 660975 | Rat | n/a | Region | gene |
| 991 | 41158717 | Uba52-ps14 | ubiquitin A-52 residue ribosomal protein fusion product 1, pseudogene 14 | | 4 | 654676 | 655228 | Rat | n/a | Region | gene |
| 990 | 40930419 | LOC120102569 | 5.8S ribosomal RNA | | 4 | 749258 | 749410 | Rat | n/a | Region | gene |
| 989 | 41187448 | LOC120102613 | 5.8S ribosomal RNA | | 4 | 1546402 | 1546554 | Rat | n/a | Region | gene |
| 988 | 41380460 | Vmn2r116l-ps20 | vomeronasal 2, receptor 116 like, pseudogene 20 | | 4 | 1547325 | 1636961 | Rat | n/a | Region | gene |
| 987 | 41298104 | LOC120102624 | 5.8S ribosomal RNA | | 4 | 1789102 | 1789254 | Rat | n/a | Region | gene |
| 986 | 41301541 | LOC120102646 | 5.8S ribosomal RNA | | 4 | 1929884 | 1930037 | Rat | n/a | Region | gene |
| 985 | 9271714 | LOC103691583 | ATP synthase-coupling factor 6, mitochondrial pseudogene | | 4 | 2497129 | 2500406 | Rat | n/a | Region | gene |
| 984 | 40990800 | LOC120102635 | 5.8S ribosomal RNA | | 4 | 2877944 | 2878097 | Rat | n/a | Region | gene |
| 983 | 41180048 | Ube2v1-ps14 | ubiquitin conjugating enzyme E2 V1, pseudogene 14 | | 4 | 2933009 | 2934492 | Rat | n/a | Region | gene |
| 982 | 41229821 | LOC120102580 | 5.8S ribosomal RNA | | 4 | 2953693 | 2953845 | Rat | n/a | Region | gene |
| 981 | 41198355 | Atp5pf-ps2 | ATP synthase peripheral stalk subunit F6, pseudogene 2 | | 4 | 3340234 | 3411812 | Rat | n/a | Region | gene |
| 980 | 41322533 | LOC120102453 | 60S ribosomal protein L17-like | | 4 | 3429342 | 3429926 | Rat | n/a | Region | gene |
| 979 | 9291847 | LOC103691954 | zinc finger protein 431-like | | 4 | 3782886 | 3785748 | Rat | n/a | Region | gene |
| 978 | 1590940 | Ube2v1-ps23 | ubiquitin conjugating enzyme E2 V1, pseudogene 23 | | 4 | 3808540 | 3809296 | Rat | n/a | Region | gene |
| 977 | 40953497 | Rpl17-ps4 | ribosomal protein L17, pseudogene 4 | | 4 | 3873268 | 3873880 | Rat | n/a | Region | gene |
| 976 | 41198911 | LOC120102772 | 5.8S ribosomal RNA | | 4 | 3916580 | 3916732 | Rat | n/a | Region | gene |
| 975 | 41116805 | LOC120102558 | 5.8S ribosomal RNA | | 4 | 4013450 | 4013602 | Rat | n/a | Region | gene |
| 974 | 7734302 | Ralbp1l3 | ralA binding protein 1 like 3 | | 4 | 4555700 | 4626990 | Rat | n/a | Region | gene |
| 973 | 11385037 | Nid2l3 | nidogen 2 like 3 | | 4 | 4658689 | 4664208 | Rat | n/a | Region | gene |
| 972 | 41164957 | LOC120102556 | U4 spliceosomal RNA | | 4 | 4663114 | 4663273 | Rat | n/a | Region | gene |
| 971 | 41389015 | LOC120102602 | 5.8S ribosomal RNA | | 4 | 4738615 | 4738766 | Rat | n/a | Region | gene |
| 970 | 6500397 | Haus8-ps2 | HAUS augmin-like complex, subunit 8, pseudogene 2 | | 4 | 5136059 | 5149904 | Rat | n/a | Region | gene |
| 969 | 2318720 | Tmed10-ps1 | transmembrane p24 trafficking protein 10, pseudogene 1 | | 4 | 5159891 | 5160624 | Rat | n/a | Region | gene |
| 968 | 1563546 | Dhfr-ps1 | dihydrofolate reductase, pseudogene 1 | | 4 | 5169069 | 5173434 | Rat | n/a | Region | gene |
| 967 | 2901 | Il6 | interleukin 6 | | 4 | 5214602 | 5219178 | Rat | n/a | Region | gene |
| 966 | 11379972 | LOC108350850 | 60S ribosomal protein L34 pseudogene | | 4 | 5343196 | 5343591 | Rat | n/a | Region | gene |
| 965 | 40930566 | LOC120102202 | uncharacterized LOC120102202 | | 4 | 5417953 | 5443360 | Rat | n/a | Region | gene |
| 964 | 11457732 | LOC108350803 | 60S ribosomal protein L7 pseudogene | | 4 | 5443501 | 5452484 | Rat | n/a | Region | gene |
| 963 | 1308207 | Dnajb6 | DnaJ heat shock protein family (Hsp40) member B6 | | 4 | 5452683 | 5556679 | Rat | n/a | Region | gene |
| 962 | 1559986 | Ube3c | ubiquitin protein ligase E3C | | 4 | 5648932 | 5749922 | Rat | n/a | Region | gene |
| 961 | 1583498 | Polr2sl1 | RNA polymerase II, I and III subunit like 1 | | 4 | 5743067 | 5743270 | Rat | n/a | Region | gene |
| 960 | 1588091 | Mnx1 | motor neuron and pancreas homeobox 1 | | 4 | 5866506 | 5871465 | Rat | n/a | Region | gene |
| 959 | 1588109 | Nom1 | nucleolar protein with MIF4G domain 1 | | 4 | 5891220 | 5910741 | Rat | n/a | Region | gene |
| 958 | 1588121 | Rsl24d1-ps1 | ribosomal L24 domain containing 1, pseudogene 1 | | 4 | 5936207 | 5936690 | Rat | n/a | Region | gene |
| 957 | 1563910 | Lmbr1 | limb development membrane protein 1 | | 4 | 5974687 | 6146348 | Rat | n/a | Region | gene |
| 956 | 1308287 | Rnf32 | ring finger protein 32 | | 4 | 6144749 | 6209320 | Rat | n/a | Region | gene |
| 955 | 1596704 | Nsa2l2 | NSA2 ribosome biogenesis factor like 2 | | 4 | 6346122 | 6346808 | Rat | n/a | Region | gene |
| 954 | 7571041 | LOC102550082 | uncharacterized LOC102550082 | | 4 | 6443839 | 6529474 | Rat | n/a | Region | gene |
| 953 | 40945507 | LOC120102203 | uncharacterized LOC120102203 | | 4 | 6885288 | 6889077 | Rat | n/a | Region | gene |
| 952 | 7585075 | LOC102546975 | uncharacterized LOC102546975 | | 4 | 6945752 | 6957648 | Rat | n/a | Region | gene |
| 951 | 3673 | Shh | sonic hedgehog signaling molecule | | 4 | 6954017 | 6963170 | Rat | n/a | Region | gene |
| 950 | 1310651 | Rbm33 | RNA binding motif protein 33 | | 4 | 6980807 | 7088334 | Rat | n/a | Region | gene |
| 949 | 1583296 | Cnpy1 | canopy FGF signaling regulator 1 | | 4 | 7182311 | 7191408 | Rat | n/a | Region | gene |
| 948 | 1561842 | En2 | engrailed homeobox 2 | | 4 | 7221096 | 7226943 | Rat | n/a | Region | gene |
| 947 | 708457 | Insig1 | insulin induced gene 1 | | 4 | 7315494 | 7323972 | Rat | n/a | Region | gene |
| 946 | 7528367 | LOC102546740 | uncharacterized LOC102546740 | | 4 | 7343886 | 7366843 | Rat | n/a | Region | gene |
| 945 | 9428705 | LOC103692012 | uncharacterized LOC103692012 | | 4 | 7401269 | 7414270 | Rat | n/a | Region | gene |
| 944 | 2851 | Htr5a | 5-hydroxytryptamine receptor 5A | | 4 | 7444968 | 7454651 | Rat | n/a | Region | gene |
| 943 | 41084820 | LOC120102658 | small nucleolar RNA SNORA48 | | 4 | 7497557 | 7497679 | Rat | n/a | Region | gene |
| 942 | 1307547 | Paxip1 | PAX interacting protein 1 | | 4 | 7525132 | 7576659 | Rat | n/a | Region | gene |
| 941 | 41057209 | Trnav-aac11 | transfer RNA valine (anticodon AAC) 11 | | 4 | 7572224 | 7572296 | Rat | n/a | Region | gene |
| 940 | 68402 | Dpp6 | dipeptidyl peptidase like 6 | | 4 | 7589386 | 8508666 | Rat | n/a | Region | gene |
| 939 | 41361083 | Gapdh-ps89 | Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 89 | | 4 | 7618937 | 7621235 | Rat | n/a | Region | gene |
| 938 | 41104292 | LOC120102469 | uncharacterized LOC120102469 | | 4 | 7656541 | 7658707 | Rat | n/a | Region | gene |
| 937 | 11471061 | LOC108350828 | 60S ribosomal protein L10a pseudogene | | 4 | 7845370 | 7857436 | Rat | n/a | Region | gene |
| 936 | 41258656 | Nme2-ps4 | NME/NM23 nucleoside diphosphate kinase 2, pseudogene 4 | | 4 | 8497261 | 8497711 | Rat | n/a | Region | gene |
| 935 | 41188942 | LOC120102576 | U6 spliceosomal RNA | | 4 | 8617335 | 8617438 | Rat | n/a | Region | gene |
| 934 | 41145582 | Cdk4-ps4 | cyclin-dependent kinase 4, pseudogene 4 | | 4 | 8703927 | 8732472 | Rat | n/a | Region | gene |
| 933 | 41324069 | LOC120102206 | uncharacterized LOC120102206 | | 4 | 9068746 | 9071677 | Rat | n/a | Region | gene |
| 932 | 7659798 | LOC102548175 | uncharacterized LOC102548175 | | 4 | 9205572 | 9215261 | Rat | n/a | Region | gene |
| 931 | 1565759 | Actr3b | actin related protein 3B | | 4 | 9261631 | 9355496 | Rat | n/a | Region | gene |
| 930 | 1564823 | Xrcc2 | X-ray repair cross complementing 2 | | 4 | 9423873 | 9502980 | Rat | n/a | Region | gene |
| 929 | 41264669 | LOC120102207 | uncharacterized LOC120102207 | | 4 | 9466446 | 9476462 | Rat | n/a | Region | gene |
| 928 | 11382704 | LOC108350851 | protein transport protein Sec61 subunit gamma pseudogene | | 4 | 9557492 | 9557698 | Rat | n/a | Region | gene |
| 927 | 2322811 | Rpl10a-ps9 | ribosomal protein L10A, pseudogene 9 | | 4 | 9589501 | 9590219 | Rat | n/a | Region | gene |
| 926 | 1561536 | Cct8l2 | chaperonin containing TCP1 subunit 8 like 2 | | 4 | 9605035 | 9606971 | Rat | n/a | Region | gene |
| 925 | 1587205 | Kmt2c | lysine methyltransferase 2C | | 4 | 9620638 | 9834787 | Rat | n/a | Region | gene |
| 924 | 41231425 | Map1lc3b-ps2 | microtubule-associated protein 1 light chain 3 beta, pseudogene 2 | | 4 | 9715992 | 9716689 | Rat | n/a | Region | gene |
| 923 | 735097 | Galnt11 | polypeptide N-acetylgalactosaminyltransferase 11 | | 4 | 9837629 | 9871141 | Rat | n/a | Region | gene |
| 922 | 11418580 | Rpl30-ps8 | ribosomal protein L30, pseudogene 8 | | 4 | 9856557 | 9856977 | Rat | n/a | Region | gene |
| 921 | 1565271 | Galntl5 | polypeptide N-acetylgalactosaminyltransferase-like 5 | | 4 | 9873426 | 9923297 | Rat | n/a | Region | gene |
| 920 | 41090173 | LOC120102456 | calcineurin B homologous protein 1-like | | 4 | 9947312 | 9949851 | Rat | n/a | Region | gene |
| 919 | 2323464 | LOC100359776 | hypothetical LOC100359776 | | 4 | 9983900 | 9993989 | Rat | n/a | Region | gene |
| 918 | 727782 | Prkag2 | protein kinase AMP-activated non-catalytic subunit gamma 2 | | 4 | 10010890 | 10252155 | Rat | n/a | Region | gene |
| 917 | 7526315 | LOC102554253 | uncharacterized LOC102554253 | | 4 | 10120883 | 10125470 | Rat | n/a | Region | gene |
| 916 | 7680602 | LOC102554193 | uncharacterized LOC102554193 | | 4 | 10163035 | 10164178 | Rat | n/a | Region | gene |
| 915 | 41315240 | LOC120102471 | uncharacterized LOC120102471 | | 4 | 10245746 | 10251046 | Rat | n/a | Region | gene |
| 914 | 621840 | Rheb | Ras homolog, mTORC1 binding | | 4 | 10278970 | 10320160 | Rat | n/a | Region | gene |
| 913 | 41241150 | LOC120102594 | U6 spliceosomal RNA | | 4 | 10353778 | 10353879 | Rat | n/a | Region | gene |
| 912 | 1308547 | Crygn | crystallin, gamma N | | 4 | 10394015 | 10401542 | Rat | n/a | Region | gene |
| 911 | 41355964 | LOC120102472 | uncharacterized LOC120102472 | | 4 | 10423496 | 10437437 | Rat | n/a | Region | gene |
| 910 | 1566180 | Wdr86 | WD repeat domain 86 | | 4 | 10423496 | 10443473 | Rat | n/a | Region | gene |
| 909 | 1359489 | Nub1 | negative regulator of ubiquitin-like proteins 1 | | 4 | 10442917 | 10473689 | Rat | n/a | Region | gene |
| 908 | 1561560 | Gpd1l3 | glycerol-3-phosphate dehydrogenase 1 like 3 | | 4 | 10523777 | 10527072 | Rat | n/a | Region | gene |
| 907 | 1311869 | Smarcd3 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 | | 4 | 10548693 | 10580334 | Rat | n/a | Region | gene |
| 906 | 1306404 | Chpf2 | chondroitin polymerizing factor 2 | | 4 | 10578470 | 10585940 | Rat | n/a | Region | gene |
| 905 | 2325494 | Mir671 | microRNA 671 | | 4 | 10580747 | 10580827 | Rat | n/a | Region | gene |
| 904 | 1304942 | Abcf2 | ATP binding cassette subfamily F member 2 | | 4 | 10594802 | 10607620 | Rat | n/a | Region | gene |
| 903 | 1564789 | Iqca1l | IQ motif containing with AAA domain 1 like | | 4 | 10616677 | 10628300 | Rat | n/a | Region | gene |
| 902 | 1562922 | Asb10 | ankyrin repeat and SOCS box-containing 10 | | 4 | 10630318 | 10644270 | Rat | n/a | Region | gene |
| 901 | 621864 | Gbx1 | gastrulation brain homeobox 1 | | 4 | 10645957 | 10672486 | Rat | n/a | Region | gene |
| 900 | 1310751 | Agap3 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 | | 4 | 10674746 | 10724848 | Rat | n/a | Region | gene |
| 899 | 735120 | Tmub1 | transmembrane and ubiquitin-like domain containing 1 | | 4 | 10729494 | 10732060 | Rat | n/a | Region | gene |
| 898 | 1311601 | Fastk | Fas-activated serine/threonine kinase | | 4 | 10732273 | 10736332 | Rat | n/a | Region | gene |
| 897 | 3711 | Slc4a2 | solute carrier family 4 member 2 | | 4 | 10736419 | 10754407 | Rat | n/a | Region | gene |
| 896 | 70514 | Cdk5 | cyclin-dependent kinase 5 | | 4 | 10754682 | 10760110 | Rat | n/a | Region | gene |
| 895 | 708578 | Asic3 | acid sensing ion channel subunit 3 | | 4 | 10760509 | 10764987 | Rat | n/a | Region | gene |
| 894 | 1307655 | Abcb8 | ATP binding cassette subfamily B member 8 | | 4 | 10766206 | 10783598 | Rat | n/a | Region | gene |
| 893 | 1560887 | Atg9b | autophagy related 9B | | 4 | 10784934 | 10793832 | Rat | n/a | Region | gene |
| 892 | 40958365 | LOC120102208 | uncharacterized LOC120102208 | | 4 | 10787630 | 10789628 | Rat | n/a | Region | gene |
| 891 | 3186 | Nos3 | nitric oxide synthase 3 | | 4 | 10793834 | 10814170 | Rat | n/a | Region | gene |
| 890 | 621414 | Kcnh2 | potassium voltage-gated channel subfamily H member 2 | | 4 | 10826834 | 10859009 | Rat | n/a | Region | gene |
| 889 | 11470826 | LOC108350647 | uncharacterized LOC108350647 | | 4 | 10910706 | 10925138 | Rat | n/a | Region | gene |
| 888 | 1560934 | Nup42 | nucleoporin 42 | | 4 | 10985554 | 11002591 | Rat | n/a | Region | gene |
| 887 | 1305564 | Klhl7 | kelch-like family member 7 | | 4 | 11006366 | 11055399 | Rat | n/a | Region | gene |
| 886 | 1562906 | Hycc1 | hyccin PI4KA lipid kinase complex subunit 1 | | 4 | 11132224 | 11239120 | Rat | n/a | Region | gene |
| 885 | 41185982 | Ube2i-ps6 | ubiquitin-conjugating enzyme E2I, pseudogene 6 | | 4 | 11162553 | 11163825 | Rat | n/a | Region | gene |
| 884 | 40988581 | LOC120102210 | uncharacterized LOC120102210 | | 4 | 11177143 | 11207140 | Rat | n/a | Region | gene |
| 883 | 7653780 | LOC102555004 | uncharacterized LOC102555004 | | 4 | 11260050 | 11268070 | Rat | n/a | Region | gene |
| 882 | 6502346 | LOC100909675 | uncharacterized LOC100909675 | | 4 | 11287605 | 11291820 | Rat | n/a | Region | gene |
| 881 | 41215821 | Snord93 | small nucleolar RNA, C/D box 93 | | 4 | 11290116 | 11290186 | Rat | n/a | Region | gene |
| 880 | 1591393 | Tomm7 | translocase of outer mitochondrial membrane 7 | | 4 | 11305122 | 11311963 | Rat | n/a | Region | gene |
| 879 | 1560433 | Rint1 | RAD50 interactor 1 | | 4 | 11319416 | 11355740 | Rat | n/a | Region | gene |
| 878 | 1307054 | Pus7 | pseudouridine synthase 7 | | 4 | 11360169 | 11401139 | Rat | n/a | Region | gene |
| 877 | 41232405 | LOC120102743 | small nucleolar RNA SNORD93 | | 4 | 11439967 | 11440037 | Rat | n/a | Region | gene |
| 876 | 1305107 | Srpk2 | SRSF protein kinase 2 | | 4 | 11464684 | 11655993 | Rat | n/a | Region | gene |
| 875 | 1309641 | Kmt2e | lysine methyltransferase 2E | | 4 | 11658218 | 11727373 | Rat | n/a | Region | gene |
| 874 | 41106171 | LOC120102473 | uncharacterized LOC120102473 | | 4 | 11765104 | 11771452 | Rat | n/a | Region | gene |
| 873 | 40993653 | LOC120102618 | U7 small nuclear RNA | | 4 | 11788276 | 11788340 | Rat | n/a | Region | gene |
| 872 | 9159670 | LOC103692025 | uncharacterized LOC103692025 | | 4 | 11836200 | 12379126 | Rat | n/a | Region | gene |
| 871 | 9400372 | Mifl1 | macrophage migration inhibitory factor like 1 | | 4 | 11966945 | 11973092 | Rat | n/a | Region | gene |
| 870 | 41244972 | Rnu2-12 | RNA, U2 small nuclear 12 | | 4 | 12375403 | 12375483 | Rat | n/a | Region | gene |
| 869 | 40977562 | LOC120102619 | U7 small nuclear RNA | | 4 | 12440957 | 12441013 | Rat | n/a | Region | gene |
| 868 | 41392212 | LOC120102614 | U7 small nuclear RNA | | 4 | 12477250 | 12477311 | Rat | n/a | Region | gene |
| 867 | 1561088 | Orc5 | origin recognition complex, subunit 5 | | 4 | 12548007 | 12612611 | Rat | n/a | Region | gene |
| 866 | 41354020 | LOC120102148 | uncharacterized LOC120102148 | | 4 | 12640903 | 12643798 | Rat | n/a | Region | gene |
| 865 | 41018004 | LOC120102692 | small nucleolar RNA SNORA17 | | 4 | 12720684 | 12720803 | Rat | n/a | Region | gene |
| 864 | 3553 | Reln | reelin | | 4 | 12736177 | 13162956 | Rat | n/a | Region | gene |
| 863 | 9334471 | Elobl5 | elongin B like 5 | | 4 | 13111861 | 13117780 | Rat | n/a | Region | gene |
| 862 | 7532340 | Cryzl1-ps1 | crystallin zeta like 1, pseudogene 1 | | 4 | 13198236 | 13199448 | Rat | n/a | Region | gene |
| 861 | 69334 | Slc26a5 | solute carrier family 26 member 5 | | 4 | 13210260 | 13249289 | Rat | n/a | Region | gene |
| 860 | 3428 | Psmc2 | proteasome 26S subunit, ATPase 2 | | 4 | 13255850 | 13270160 | Rat | n/a | Region | gene |
| 859 | 620524 | Dnajc2 | DnaJ heat shock protein family (Hsp40) member C2 | | 4 | 13270239 | 13297438 | Rat | n/a | Region | gene |
| 858 | 41053492 | LOC120102645 | small nucleolar RNA SNORA48 | | 4 | 13280755 | 13280901 | Rat | n/a | Region | gene |
| 857 | 621297 | Pmpcb | peptidase, mitochondrial processing subunit beta | | 4 | 13297583 | 13310363 | Rat | n/a | Region | gene |
| 856 | 1587329 | Arf1-ps3 | ADP-ribosylation factor 1, pseudogene 3 | | 4 | 13325480 | 13328608 | Rat | n/a | Region | gene |
| 855 | 735197 | Napepld | N-acyl phosphatidylethanolamine phospholipase D | | 4 | 13360532 | 13398815 | Rat | n/a | Region | gene |
| 854 | 1305915 | Armc10 | armadillo repeat containing 10 | | 4 | 13399004 | 13414594 | Rat | n/a | Region | gene |
| 853 | 1642425 | Fbxl13 | F-box and leucine-rich repeat protein 13 | | 4 | 13414880 | 13607079 | Rat | n/a | Region | gene |
| 852 | 41107235 | LOC120102659 | small nucleolar RNA SNORA17 | | 4 | 13496986 | 13497113 | Rat | n/a | Region | gene |
| 851 | 1560165 | Lrrc17 | leucine rich repeat containing 17 | | 4 | 13501428 | 13531845 | Rat | n/a | Region | gene |
| 850 | 1562135 | Fam185a | family with sequence similarity 185, member A | | 4 | 13542022 | 13662967 | Rat | n/a | Region | gene |
| 849 | 41018904 | LOC120102739 | small nucleolar RNA SNORD86 | | 4 | 13555824 | 13555909 | Rat | n/a | Region | gene |
| 848 | 1559535 | Ccdc146 | coiled-coil domain containing 146 | | 4 | 13662766 | 13811619 | Rat | n/a | Region | gene |
| 847 | 620170 | Fgl2 | fibrinogen-like 2 | | 4 | 13710566 | 13716207 | Rat | n/a | Region | gene |
| 846 | 41335650 | LOC120102212 | uncharacterized LOC120102212 | | 4 | 13755447 | 13761134 | Rat | n/a | Region | gene |
| 845 | 1563271 | Gsap | gamma-secretase activating protein | | 4 | 13813046 | 13907875 | Rat | n/a | Region | gene |
| 844 | 41237841 | Net1-ps1 | neuroepithelial cell transforming 1, pseudogene 1 | | 4 | 13955818 | 13973331 | Rat | n/a | Region | gene |
| 843 | 41193151 | LOC120102737 | small nucleolar RNA SNORA40 | | 4 | 13981033 | 13981157 | Rat | n/a | Region | gene |
| 842 | 7666239 | LOC102556034 | uncharacterized LOC102556034 | | 4 | 14012213 | 14020864 | Rat | n/a | Region | gene |
| 841 | 620894 | Ptpn12 | protein tyrosine phosphatase, non-receptor type 12 | | 4 | 14020997 | 14092931 | Rat | n/a | Region | gene |
| 840 | 41353109 | LOC120102213 | uncharacterized LOC120102213 | | 4 | 14100599 | 14110132 | Rat | n/a | Region | gene |
| 839 | 1308748 | Rsbn1l | round spermatid basic protein 1-like | | 4 | 14138076 | 14203972 | Rat | n/a | Region | gene |
| 838 | 9685233 | Aptr | Alu-mediated CDKN1A/p21 transcriptional regulator | | 4 | 14138275 | 14139577 | Rat | n/a | Region | gene |
| 837 | 1308939 | Tmem60 | transmembrane protein 60 | | 4 | 14210029 | 14214884 | Rat | n/a | Region | gene |
| 836 | 1310593 | Phtf2 | putative homeodomain transcription factor 2 | | 4 | 14215190 | 14330549 | Rat | n/a | Region | gene |
| 835 | 621855 | Magi2 | membrane associated guanylate kinase, WW and PDZ domain containing 2 | | 4 | 14386389 | 15870036 | Rat | n/a | Region | gene |
| 834 | 41061536 | LOC120102478 | uncharacterized LOC120102478 | | 4 | 14393876 | 14398745 | Rat | n/a | Region | gene |
| 833 | 40992258 | LOC120102477 | uncharacterized LOC120102477 | | 4 | 14588903 | 14591674 | Rat | n/a | Region | gene |
| 832 | 41096115 | Rpl28-ps10 | ribosomal protein L28, pseudogene 10 | | 4 | 14815784 | 14816098 | Rat | n/a | Region | gene |
| 831 | 41012632 | LOC120102678 | small nucleolar RNA SNORA17 | | 4 | 14948787 | 14948916 | Rat | n/a | Region | gene |
| 830 | 11420335 | Tmsb10l4 | thymosin beta 10 like 4 | | 4 | 15299198 | 15299866 | Rat | n/a | Region | gene |
| 829 | 9417558 | Lmnb2-ps1 | lamin B2, pseudogene 1 | | 4 | 15457286 | 15601866 | Rat | n/a | Region | gene |
| 828 | 41303880 | Rnu6-543 | RNA, U6 small nuclear 543 | | 4 | 15580139 | 15580245 | Rat | n/a | Region | gene |
| 827 | 41216683 | Trnap-agg63 | transfer RNA proline (anticodon AGG) 63 | | 4 | 15704157 | 15704231 | Rat | n/a | Region | gene |
| 826 | 41065937 | LOC120102475 | uncharacterized LOC120102475 | | 4 | 15809205 | 15825962 | Rat | n/a | Region | gene |
| 825 | 41161253 | LOC120102476 | uncharacterized LOC120102476 | | 4 | 15846943 | 15848437 | Rat | n/a | Region | gene |
| 824 | 7681325 | 4921504A21Rikl | RIKEN cDNA 4921504A21 gene like | | 4 | 15870497 | 15898907 | Rat | n/a | Region | gene |
| 823 | 2318988 | Bclaf1-ps1 | BCL2-associated transcription factor 1, pseudogene 1 | | 4 | 15885307 | 15888072 | Rat | n/a | Region | gene |
| 822 | 41076500 | LOC120102698 | small nucleolar RNA SNORA17 | | 4 | 16288953 | 16289069 | Rat | n/a | Region | gene |
| 821 | 6497775 | Apex1-ps2 | apurinic/apyrimidinic endodeoxyribonuclease 1, pseudogene 2 | | 4 | 16445195 | 16446152 | Rat | n/a | Region | gene |
| 820 | 2713 | Gnai1 | G protein subunit alpha i1 | | 4 | 16814000 | 16898119 | Rat | n/a | Region | gene |
| 819 | 727817 | Gnat3 | G protein subunit alpha transducin 3 | | 4 | 17162500 | 17212283 | Rat | n/a | Region | gene |
| 818 | 41284761 | Trnaa-agc88 | transfer RNA alanine (anticodon AGC) 88 | | 4 | 17190017 | 17190091 | Rat | n/a | Region | gene |
| 817 | 2301 | Cd36 | CD36 molecule | | 4 | 17317343 | 17410084 | Rat | n/a | Region | gene |
| 816 | 1565355 | Cd36l1 | CD36 molecule like 1 | | 4 | 17424749 | 17465808 | Rat | n/a | Region | gene |
| 815 | 41249586 | Cd36-ps1 | CD36 molecule, pseudogene 1 | | 4 | 17487837 | 17514900 | Rat | n/a | Region | gene |
| 814 | 1309343 | Sema3c | semaphorin 3C | | 4 | 17583212 | 17747234 | Rat | n/a | Region | gene |
| 813 | 41391017 | LOC120102215 | uncharacterized LOC120102215 | | 4 | 17688579 | 17739337 | Rat | n/a | Region | gene |
| 812 | 1563537 | Rps9-ps5 | ribosomal protein S9, pseudogene 5 | | 4 | 17822680 | 17823238 | Rat | n/a | Region | gene |
| 811 | 7549033 | LOC102551002 | uncharacterized LOC102551002 | | 4 | 17965657 | 18047911 | Rat | n/a | Region | gene |
| 810 | 41145508 | LOC120102685 | small nucleolar RNA SNORA17 | | 4 | 18073298 | 18073422 | Rat | n/a | Region | gene |
| 809 | 2322730 | Tfb1m-ps1 | transcription factor B1, mitochondrial, pseudogene 1 | | 4 | 18192517 | 18200323 | Rat | n/a | Region | gene |
| 808 | 7747752 | Cdhr17 | cadherin related family member 17 | | 4 | 18427877 | 18525060 | Rat | n/a | Region | gene |
| 807 | 2794 | Hgf | hepatocyte growth factor | | 4 | 18673736 | 18745582 | Rat | n/a | Region | gene |
| 806 | 9414363 | LOC103692033 | uncharacterized LOC103692033 | | 4 | 18744502 | 18757594 | Rat | n/a | Region | gene |
| 805 | 2247 | Cacna2d1 | calcium voltage-gated channel auxiliary subunit alpha2delta 1 | | 4 | 18950611 | 19374969 | Rat | n/a | Region | gene |
| 804 | 2322535 | Plrg1-ps1 | pleiotropic regulator 1, pseudogene 1 | | 4 | 19406463 | 19432154 | Rat | n/a | Region | gene |
| 803 | 40929882 | LOC120102654 | small nucleolar RNA SNORA48 | | 4 | 19444113 | 19444260 | Rat | n/a | Region | gene |
| 802 | 69406 | Pclo | piccolo (presynaptic cytomatrix protein) | | 4 | 19691439 | 20050015 | Rat | n/a | Region | gene |
| 801 | 11466909 | LOC108350655 | uncharacterized LOC108350655 | | 4 | 20233143 | 20255059 | Rat | n/a | Region | gene |
| 800 | 1310973 | Sema3e | semaphorin 3E | | 4 | 20297534 | 20555287 | Rat | n/a | Region | gene |
| 799 | 41344080 | LOC120102552 | 5S ribosomal RNA | | 4 | 20519601 | 20519719 | Rat | n/a | Region | gene |
| 798 | 7646743 | LOC102552661 | uncharacterized LOC102552661 | | 4 | 20625552 | 20630241 | Rat | n/a | Region | gene |
| 797 | 40969825 | LOC120102459 | NEDD4-binding protein 1-like | | 4 | 20713514 | 20714914 | Rat | n/a | Region | gene |
| 796 | 41257705 | LOC120102460 | NEDD4-binding protein 1-like | | 4 | 20749192 | 20750556 | Rat | n/a | Region | gene |
| 795 | 41285801 | LOC120102461 | NEDD4-binding protein 1-like | | 4 | 20756424 | 20757551 | Rat | n/a | Region | gene |
| 794 | 41096301 | LOC120102462 | NEDD4-binding protein 1-like | | 4 | 20763689 | 20765077 | Rat | n/a | Region | gene |
| 793 | 1584092 | N4bp1l1 | Nedd4 binding protein 1 like 1 | | 4 | 20806230 | 20807323 | Rat | n/a | Region | gene |
| 792 | 40989850 | LOC120102149 | NEDD4-binding protein 1-like | | 4 | 20815305 | 20815945 | Rat | n/a | Region | gene |
| 791 | 41113357 | LOC120102150 | NEDD4-binding protein 1-like | | 4 | 20822565 | 20823205 | Rat | n/a | Region | gene |
| 790 | 1583001 | Scaf11-ps1 | SR-related CTD-associated factor 11, pseudogene 1 | | 4 | 20872341 | 20886738 | Rat | n/a | Region | gene |
| 789 | 41165648 | LOC120102463 | NEDD4-binding protein 1-like | | 4 | 20887085 | 20888188 | Rat | n/a | Region | gene |
| 788 | 41240105 | LOC120102151 | NEDD4-binding protein 1-like | | 4 | 20929616 | 20931001 | Rat | n/a | Region | gene |
| 787 | 41199734 | LOC120102216 | protein SCAF11-like | | 4 | 21023955 | 21027327 | Rat | n/a | Region | gene |
| 786 | 7550011 | LOC102552749 | MLV-related proviral Env polyprotein-like | | 4 | 21051941 | 21053799 | Rat | n/a | Region | gene |
| 785 | 41115840 | LOC120102217 | uncharacterized LOC120102217 | | 4 | 21159687 | 21181773 | Rat | n/a | Region | gene |
| 784 | 3657 | Sema3a | semaphorin 3A | | 4 | 21282398 | 21754834 | Rat | n/a | Region | gene |
| 783 | 41320971 | LOC120102218 | uncharacterized LOC120102218 | | 4 | 22092885 | 22119273 | Rat | n/a | Region | gene |
| 782 | 727939 | Sema3d | semaphorin 3D | | 4 | 22316769 | 22505930 | Rat | n/a | Region | gene |
| 781 | 40955874 | LOC120102571 | U6 spliceosomal RNA | | 4 | 22968285 | 22968392 | Rat | n/a | Region | gene |
| 780 | 41054814 | Envl-ps4 | MLV-related proviral Env polyprotein-like, pseudogene 4 | | 4 | 22988477 | 22990225 | Rat | n/a | Region | gene |
| 779 | 41303418 | LOC120102627 | small nucleolar RNA SNORA31 | | 4 | 23084067 | 23084203 | Rat | n/a | Region | gene |
| 778 | 7624497 | LOC102553320 | uncharacterized LOC102553320 | | 4 | 23592964 | 23661292 | Rat | n/a | Region | gene |
| 777 | 1562636 | Ppp1r3bl1 | protein phosphatase 1, regulatory subunit 3B like 1 | | 4 | 23765874 | 23768883 | Rat | n/a | Region | gene |
| 776 | 1564798 | Tmem183a-ps1 | transmembrane protein 183A, pseudogene 1 | | 4 | 23897157 | 23898281 | Rat | n/a | Region | gene |
| 775 | 6492128 | Rps6-ps11 | ribosomal protein S6, pseudogene 11 | | 4 | 24093353 | 24096338 | Rat | n/a | Region | gene |
| 774 | 9197484 | LOC103692044 | mitochondrial import inner membrane translocase subunit Tim8 A pseudogene | | 4 | 24289429 | 24289895 | Rat | n/a | Region | gene |
| 773 | 2744 | Grm3 | glutamate metabotropic receptor 3 | | 4 | 24364854 | 24643972 | Rat | n/a | Region | gene |
| 772 | 1563349 | Elapor2 | endosome-lysosome associated apoptosis and autophagy regulator family member 2 | | 4 | 24613163 | 24805729 | Rat | n/a | Region | gene |
| 771 | 2325362 | Mir879 | microRNA 879 | | 4 | 24724455 | 24724530 | Rat | n/a | Region | gene |
| 770 | 11462374 | LOC108350658 | uncharacterized LOC108350658 | | 4 | 24779571 | 24794265 | Rat | n/a | Region | gene |
| 769 | 7536117 | LOC102555663 | uncharacterized LOC102555663 | | 4 | 24805912 | 24807670 | Rat | n/a | Region | gene |
| 768 | 70966 | Dmtf1 | cyclin D binding myb-like transcription factor 1 | | 4 | 24909937 | 24950786 | Rat | n/a | Region | gene |
| 767 | 1562351 | Tmem243 | transmembrane protein 243 | | 4 | 24950791 | 24968642 | Rat | n/a | Region | gene |
| 766 | 41334218 | LOC120102603 | U6 spliceosomal RNA | | 4 | 24952724 | 24952824 | Rat | n/a | Region | gene |
| 765 | 41118809 | LOC120102219 | uncharacterized LOC120102219 | | 4 | 24993818 | 25003812 | Rat | n/a | Region | gene |
| 764 | 41212670 | Eif3k-ps1 | eukaryotic translation initiation factor 3, subunit K, pseudogene 1 | | 4 | 25012064 | 25012685 | Rat | n/a | Region | gene |
| 763 | 70908 | Crot | carnitine O-octanoyltransferase | | 4 | 25068270 | 25133111 | Rat | n/a | Region | gene |
| 762 | 620248 | Abcb4 | ATP binding cassette subfamily B member 4 | | 4 | 25150998 | 25209489 | Rat | n/a | Region | gene |
| 761 | 41286244 | LOC120102221 | uncharacterized LOC120102221 | | 4 | 25171669 | 25175960 | Rat | n/a | Region | gene |
| 760 | 41047811 | C1h11orf98-ps2 | similar to human chromosome 11 open reading frame 98, pseudogene 2 | | 4 | 25174727 | 25175091 | Rat | n/a | Region | gene |
| 759 | 3318 | Abcb1b | ATP-binding cassette, sub-family B member 1B | | 4 | 25242761 | 25325194 | Rat | n/a | Region | gene |
| 758 | 41222673 | LOC120102222 | uncharacterized LOC120102222 | | 4 | 25245400 | 25250299 | Rat | n/a | Region | gene |
| 757 | 619951 | Abcb1a | ATP binding cassette subfamily B member 1A | | 4 | 25357467 | 25529941 | Rat | n/a | Region | gene |
| 756 | 1587590 | Rundc3b | RUN domain containing 3B | | 4 | 25462543 | 25599477 | Rat | n/a | Region | gene |
| 755 | 1308774 | Slc25a40 | solute carrier family 25, member 40 | | 4 | 25631447 | 25676454 | Rat | n/a | Region | gene |
| 754 | 1305854 | Dbf4 | DBF4-CDC7 kinase regulatory subunit | | 4 | 25676570 | 25701152 | Rat | n/a | Region | gene |
| 753 | 1585016 | Adam22 | ADAM metallopeptidase domain 22 | | 4 | 25716055 | 25970932 | Rat | n/a | Region | gene |
| 752 | 41165065 | Trnap-agg72 | transfer RNA proline (anticodon AGG) 72 | | 4 | 25780505 | 25780585 | Rat | n/a | Region | gene |
| 751 | 41303543 | LOC120102223 | uncharacterized LOC120102223 | | 4 | 25821696 | 25835920 | Rat | n/a | Region | gene |
| 750 | 1584485 | Sri | sorcin | | 4 | 25973493 | 25997879 | Rat | n/a | Region | gene |
| 749 | 1560331 | Steap4 | STEAP4 metalloreductase | | 4 | 26077182 | 26099859 | Rat | n/a | Region | gene |
| 748 | 41240640 | LOC120102760 | U2 spliceosomal RNA | | 4 | 26375297 | 26375438 | Rat | n/a | Region | gene |
| 747 | 41340251 | Ranbp1-ps1 | RAN binding protein 1, pseudogene 1 | | 4 | 26468954 | 26472445 | Rat | n/a | Region | gene |
| 746 | 1589640 | Zfp804b | zinc finger protein 804B | | 4 | 26608510 | 27144717 | Rat | n/a | Region | gene |
| 745 | 41129509 | Rnu2-34 | RNA, U2 small nuclear 34 | | 4 | 26617169 | 26617247 | Rat | n/a | Region | gene |
| 744 | 41258698 | LOC120102775 | U4 spliceosomal RNA | | 4 | 26618134 | 26618285 | Rat | n/a | Region | gene |
| 743 | 1564345 | Tex47 | testis expressed 47 | | 4 | 26644098 | 26647393 | Rat | n/a | Region | gene |
| 742 | 1589639 | Cd2ap-ps1 | CD2-associated protein, pseudogene 1 | | 4 | 27198006 | 27200492 | Rat | n/a | Region | gene |
| 741 | 7734714 | LOC102549955 | uncharacterized LOC102549955 | | 4 | 27210682 | 27262917 | Rat | n/a | Region | gene |
| 740 | 41114928 | Ewsr1-ps6 | EWS RNA-binding protein 6 | | 4 | 27526233 | 27528198 | Rat | n/a | Region | gene |