| 1000 | 3983 | Zap70 | zeta chain of T cell receptor associated protein kinase 70 | | 9 | 38989750 | 39011701 | Rat | n/a | Region | gene |
| 999 | 2728 | Cmklr2 | chemerin chemokine-like receptor 2 | | 9 | 64583310 | 64617883 | Rat | n/a | Region | gene |
| 998 | 619710 | Uggt1 | UDP-glucose glycoprotein glucosyltransferase 1 | | 9 | 38355229 | 38468473 | Rat | n/a | Region | gene |
| 997 | 619768 | Pou3f3 | POU class 3 homeobox 3 | | 9 | 44945872 | 44948998 | Rat | n/a | Region | gene |
| 996 | 70879 | Atic | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase | | 9 | 73164846 | 73184897 | Rat | n/a | Region | gene |
| 995 | 70882 | Nab1 | Ngfi-A binding protein 1 | | 9 | 49053579 | 49093078 | Rat | n/a | Region | gene |
| 994 | 61963 | Fhl2 | four and a half LIM domains 2 | | 9 | 45388979 | 45462421 | Rat | n/a | Region | gene |
| 993 | 3976 | Xrcc5 | X-ray repair cross complementing 5 | | 9 | 73955216 | 74044020 | Rat | n/a | Region | gene |
| 992 | 61975 | Ctla4 | cytotoxic T-lymphocyte-associated protein 4 | | 9 | 62318874 | 62325978 | Rat | n/a | Region | gene |
| 991 | 70925 | Pecr | peroxisomal trans-2-enoyl-CoA reductase | | 9 | 73897877 | 73926511 | Rat | n/a | Region | gene |
| 990 | 2876 | Igfbp5 | insulin-like growth factor binding protein 5 | | 9 | 74452371 | 74464953 | Rat | n/a | Region | gene |
| 989 | 2124 | Speg | striated muscle enriched protein kinase | | 9 | 76865714 | 76923170 | Rat | n/a | Region | gene |
| 988 | 2873 | Igfbp2 | insulin-like growth factor binding protein 2 | | 9 | 74415574 | 74442945 | Rat | n/a | Region | gene |
| 987 | 2905 | Cxcr1 | C-X-C motif chemokine receptor 1 | | 9 | 75766894 | 75771079 | Rat | n/a | Region | gene |
| 986 | 2912 | Inha | inhibin subunit alpha | | 9 | 76994465 | 76997366 | Rat | n/a | Region | gene |
| 985 | 2844 | Hspe1 | heat shock protein family E (Hsp10) member 1 | | 9 | 56589912 | 56593000 | Rat | n/a | Region | gene |
| 984 | 2862 | Idh1 | isocitrate dehydrogenase (NADP(+)) 1 | | 9 | 66534146 | 66563703 | Rat | n/a | Region | gene |
| 983 | 71029 | Col3a1 | collagen type III alpha 1 chain | | 9 | 47374611 | 47410547 | Rat | n/a | Region | gene |
| 982 | 3884 | Tnp1 | transition protein 1 | | 9 | 74594463 | 74595072 | Rat | n/a | Region | gene |
| 981 | 620016 | Mpp4 | MAGUK p55 scaffold protein 4 | | 9 | 60569734 | 60613035 | Rat | n/a | Region | gene |
| 980 | 620021 | Ihh | Indian hedgehog signaling molecule | | 9 | 76504315 | 76510532 | Rat | n/a | Region | gene |
| 979 | 70994 | Myo1b | myosin Ib | | 9 | 49690043 | 49852373 | Rat | n/a | Region | gene |
| 978 | 3044 | Map2 | microtubule-associated protein 2 | | 9 | 67723422 | 67981886 | Rat | n/a | Region | gene |
| 977 | 3555 | Resp18 | regulated endocrine-specific protein 18 | | 9 | 76765179 | 76771824 | Rat | n/a | Region | gene |
| 976 | 2422 | Crygd | crystallin, gamma D | | 9 | 66442057 | 66443668 | Rat | n/a | Region | gene |
| 975 | 70948 | Cnga3 | cyclic nucleotide gated channel subunit alpha 3 | | 9 | 39447534 | 39494044 | Rat | n/a | Region | gene |
| 974 | 3719 | Slc9a2 | solute carrier family 9 member A2 | | 9 | 42932001 | 43014447 | Rat | n/a | Region | gene |
| 973 | 628768 | Cryba2 | crystallin, beta A2 | | 9 | 76447250 | 76457968 | Rat | n/a | Region | gene |
| 972 | 621025 | Plcd4 | phospholipase C, delta 4 | | 9 | 76115523 | 76158602 | Rat | n/a | Region | gene |
| 971 | 631400 | Gpbar1 | G protein-coupled bile acid receptor 1 | | 9 | 75860758 | 75863260 | Rat | n/a | Region | gene |
| 970 | 631406 | Fzd5 | frizzled class receptor 5 | | 9 | 66113096 | 66120276 | Rat | n/a | Region | gene |
| 969 | 629474 | Stk16 | serine/threonine kinase 16 | | 9 | 76705591 | 76708859 | Rat | n/a | Region | gene |
| 968 | 631433 | Prim2 | DNA primase subunit 2 | | 9 | 35692376 | 35904521 | Rat | n/a | Region | gene |
| 967 | 727915 | Cyp27a1 | cytochrome P450, family 27, subfamily a, polypeptide 1 | | 9 | 76264655 | 76294551 | Rat | n/a | Region | gene |
| 966 | 620686 | Des | desmin | | 9 | 76850979 | 76858695 | Rat | n/a | Region | gene |
| 965 | 621314 | Hspd1 | heat shock protein family D (Hsp60) member 1 | | 9 | 56579195 | 56590011 | Rat | n/a | Region | gene |
| 964 | 727925 | Lgsn | lengsin, lens protein with glutamine synthetase domain | | 9 | 33416362 | 33447919 | Rat | n/a | Region | gene |
| 963 | 2707 | Gls | glutaminase | | 9 | 49344616 | 49416900 | Rat | n/a | Region | gene |
| 962 | 2395 | Cps1 | carbamoyl-phosphate synthase 1 | | 9 | 68614153 | 68737037 | Rat | n/a | Region | gene |
| 961 | 2892 | Il1r1 | interleukin 1 receptor type 1 | | 9 | 42504917 | 42580958 | Rat | n/a | Region | gene |
| 960 | 2894 | Il1rl1 | interleukin 1 receptor-like 1 | | 9 | 42661694 | 42727266 | Rat | n/a | Region | gene |
| 959 | 2906 | Cxcr2 | C-X-C motif chemokine receptor 2 | | 9 | 75729493 | 75735868 | Rat | n/a | Region | gene |
| 958 | 631415 | Ppil3 | peptidylprolyl isomerase like 3 | | 9 | 59966405 | 59980147 | Rat | n/a | Region | gene |
| 957 | 628860 | Fev | FEV transcription factor, ETS family member | | 9 | 76439164 | 76443603 | Rat | n/a | Region | gene |
| 956 | 727867 | Il18rap | interleukin 18 receptor accessory protein | | 9 | 42768112 | 42800964 | Rat | n/a | Region | gene |
| 955 | 620183 | Mob4 | MOB family member 4, phocein | | 9 | 56617374 | 56641336 | Rat | n/a | Region | gene |
| 954 | 620218 | Creb1 | cAMP responsive element binding protein 1 | | 9 | 65903511 | 65972562 | Rat | n/a | Region | gene |
| 953 | 628771 | Abi2 | abl-interactor 2 | | 9 | 61827186 | 61905703 | Rat | n/a | Region | gene |
| 952 | 2421 | Crygc | crystallin, gamma C | | 9 | 66451591 | 66453626 | Rat | n/a | Region | gene |
| 951 | 2423 | Cryge | crystallin, gamma E | | 9 | 66429924 | 66432521 | Rat | n/a | Region | gene |
| 950 | 620457 | Stk17b | serine/threonine kinase 17b | | 9 | 55307485 | 55338085 | Rat | n/a | Region | gene |
| 949 | 708420 | Plcl1 | phospholipase C-like 1 | | 9 | 56901573 | 57238782 | Rat | n/a | Region | gene |
| 948 | 620148 | Sf3b1 | splicing factor 3b, subunit 1 | | 9 | 56492403 | 56532300 | Rat | n/a | Region | gene |
| 947 | 620123 | Icos | inducible T-cell co-stimulator | | 9 | 62368075 | 62406900 | Rat | n/a | Region | gene |
| 946 | 621738 | Khdrbs2 | KH RNA binding domain containing, signal transduction associated 2 | | 9 | 34447023 | 34953684 | Rat | n/a | Region | gene |
| 945 | 620777 | Ptprn | protein tyrosine phosphatase, receptor type, N | | 9 | 76741010 | 76756704 | Rat | n/a | Region | gene |
| 944 | 621749 | Unc50 | unc-50 inner nuclear membrane RNA binding protein | | 9 | 39664944 | 39674369 | Rat | n/a | Region | gene |
| 943 | 620180 | Slc40a1 | solute carrier family 40 member 1 | | 9 | 48033526 | 48053876 | Rat | n/a | Region | gene |
| 942 | 621142 | Tsga10 | testis specific 10 | | 9 | 39991203 | 40098259 | Rat | n/a | Region | gene |
| 941 | 621147 | Il1r2 | interleukin 1 receptor type 2 | | 9 | 42384280 | 42424726 | Rat | n/a | Region | gene |
| 940 | 621202 | Rpl31 | ribosomal protein L31 | | 9 | 41647397 | 41651441 | Rat | n/a | Region | gene |
| 939 | 621216 | Chst10 | carbohydrate sulfotransferase 10 | | 9 | 41092805 | 41122737 | Rat | n/a | Region | gene |
| 938 | 620484 | Nop58 | NOP58 ribonucleoprotein | | 9 | 61120939 | 61144810 | Rat | n/a | Region | gene |
| 937 | 621072 | Bard1 | BRCA1 associated RING domain 1 | | 9 | 72616070 | 72694553 | Rat | n/a | Region | gene |
| 936 | 621477 | Eif4g2-ps1 | eukaryotic translation initiation factor 4, gamma 2, pseudogene 1 | | 9 | 33046884 | 33050665 | Rat | n/a | Region | gene |
| 935 | 68386 | Inpp4a | inositol polyphosphate-4-phosphatase type I A | | 9 | 39528245 | 39650574 | Rat | n/a | Region | gene |
| 934 | 621442 | Nrp2 | neuropilin 2 | | 9 | 64122815 | 64238007 | Rat | n/a | Region | gene |
| 933 | 708355 | Txndc9 | thioredoxin domain containing 9 | | 9 | 40211818 | 40221953 | Rat | n/a | Region | gene |
| 932 | 1601463 | Slc11a1 | solute carrier family 11 member 1 | | 9 | 75957193 | 75968115 | Rat | n/a | Region | gene |
| 931 | 69416 | Lancl1 | LanC like glutathione S-transferase 1 | | 9 | 68515052 | 68548646 | Rat | n/a | Region | gene |
| 930 | 620486 | Erbb4 | erb-b2 receptor tyrosine kinase 4 | | 9 | 69523733 | 70596743 | Rat | n/a | Region | gene |
| 929 | 1303213 | Pgap1 | post-GPI attachment to proteins inositol deacylase 1 | | 9 | 55975574 | 56044325 | Rat | n/a | Region | gene |
| 928 | 1303159 | Maip1 | matrix AAA peptidase interacting protein 1 | | 9 | 58978901 | 58986831 | Rat | n/a | Region | gene |
| 927 | 70921 | Col5a2 | collagen type V alpha 2 chain | | 9 | 47448741 | 47598134 | Rat | n/a | Region | gene |
| 926 | 2299 | Cd28 | Cd28 molecule | | 9 | 62166324 | 62194674 | Rat | n/a | Region | gene |
| 925 | 1304925 | Phf3 | PHD finger protein 3 | | 9 | 33063855 | 33136013 | Rat | n/a | Region | gene |
| 924 | 1304808 | Ino80d | INO80 complex subunit D | | 9 | 64447075 | 64514013 | Rat | n/a | Region | gene |
| 923 | 1307048 | Vil1 | villin 1 | | 9 | 75991141 | 76018860 | Rat | n/a | Region | gene |
| 922 | 735017 | Eif5b | eukaryotic translation initiation factor 5B | | 9 | 40222769 | 40277482 | Rat | n/a | Region | gene |
| 921 | 620847 | Cflar | CASP8 and FADD-like apoptosis regulator | | 9 | 60185338 | 60236173 | Rat | n/a | Region | gene |
| 920 | 3115 | Mstn | myostatin | | 9 | 48452533 | 48458933 | Rat | n/a | Region | gene |
| 919 | 621584 | Tpp2 | tripeptidyl peptidase 2 | | 9 | 46046712 | 46128157 | Rat | n/a | Region | gene |
| 918 | 620612 | Pth2r | parathyroid hormone 2 receptor | | 9 | 66706050 | 66810601 | Rat | n/a | Region | gene |
| 917 | 735072 | Wdr12 | WD repeat domain 12 | | 9 | 61475498 | 61502762 | Rat | n/a | Region | gene |
| 916 | 621068 | Asic4 | acid sensing ion channel subunit family member 4 | | 9 | 76941532 | 76962900 | Rat | n/a | Region | gene |
| 915 | 1304559 | Wnt6 | Wnt family member 6 | | 9 | 76329882 | 76343523 | Rat | n/a | Region | gene |
| 914 | 620945 | Casp8 | caspase 8 | | 9 | 60263863 | 60312542 | Rat | n/a | Region | gene |
| 913 | 2624 | Fn1 | fibronectin 1 | | 9 | 73196044 | 73264695 | Rat | n/a | Region | gene |
| 912 | 68427 | Tns1 | tensin 1 | | 9 | 75491886 | 75702853 | Rat | n/a | Region | gene |
| 911 | 71077 | Abcb6 | ATP binding cassette subfamily B member 6 | | 9 | 76668554 | 76677263 | Rat | n/a | Region | gene |
| 910 | 1306822 | Carf | calcium responsive transcription factor | | 9 | 61502368 | 61552433 | Rat | n/a | Region | gene |
| 909 | 621798 | Dnah7 | dynein, axonemal, heavy chain 7 | | 9 | 54960235 | 55266529 | Rat | n/a | Region | gene |
| 908 | 1304684 | Poglut2 | protein O-glucosyltransferase 2 | | 9 | 46256388 | 46268714 | Rat | n/a | Region | gene |
| 907 | 620915 | Trak2 | trafficking kinesin protein 2 | | 9 | 60348531 | 60414036 | Rat | n/a | Region | gene |
| 906 | 735221 | Cyp20a1 | cytochrome P450, family 20, subfamily a, polypeptide 1 | | 9 | 61755804 | 61805123 | Rat | n/a | Region | gene |
| 905 | 71082 | Bmpr2 | bone morphogenetic protein receptor type 2 | | 9 | 61192718 | 61307280 | Rat | n/a | Region | gene |
| 904 | 620608 | Cox5b | cytochrome c oxidase subunit 5B | | 9 | 38921980 | 38923806 | Rat | n/a | Region | gene |
| 903 | 1304653 | Ccdc115 | coiled-coil domain containing 115 | | 9 | 36650384 | 36654348 | Rat | n/a | Region | gene |
| 902 | 1304586 | Abca12 | ATP binding cassette subfamily A member 12 | | 9 | 72822661 | 72995748 | Rat | n/a | Region | gene |
| 901 | 735110 | Ica1l | islet cell autoantigen 1-like | | 9 | 61410959 | 61469884 | Rat | n/a | Region | gene |
| 900 | 735129 | Bzw1 | basic leucine zipper and W2 domains 1 | | 9 | 59930672 | 59944468 | Rat | n/a | Region | gene |
| 899 | 1305571 | Cnnm4 | cyclin and CBS domain divalent metal cation transport mediator 4 | | 9 | 38711726 | 38750942 | Rat | n/a | Region | gene |
| 898 | 1305575 | Osgepl1 | O-sialoglycoprotein endopeptidase-like 1 | | 9 | 48214995 | 48229440 | Rat | n/a | Region | gene |
| 897 | 3771 | Stat1 | signal transducer and activator of transcription 1 | | 9 | 49419561 | 49459969 | Rat | n/a | Region | gene |
| 896 | 1305848 | Arpc2 | actin related protein 2/3 complex, subunit 2 | | 9 | 75820782 | 75851471 | Rat | n/a | Region | gene |
| 895 | 1305629 | Ctdsp1 | CTD small phosphatase 1 | | 9 | 75973694 | 75979298 | Rat | n/a | Region | gene |
| 894 | 1306332 | Asnsd1 | asparagine synthetase domain containing 1 | | 9 | 48126808 | 48139073 | Rat | n/a | Region | gene |
| 893 | 1306134 | Smarcal1 | Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 | | 9 | 74239718 | 74286156 | Rat | n/a | Region | gene |
| 892 | 1306919 | Sumo1 | small ubiquitin-like modifier 1 | | 9 | 61078790 | 61108697 | Rat | n/a | Region | gene |
| 891 | 1305645 | Ecrg4 | ECRG4 augurin precursor | | 9 | 45992954 | 46012605 | Rat | n/a | Region | gene |
| 890 | 1305650 | Mgat4a | alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A | | 9 | 39673427 | 39786747 | Rat | n/a | Region | gene |
| 889 | 1306380 | Gulp1 | GULP PTB domain containing engulfment adaptor 1 | | 9 | 46622699 | 46899005 | Rat | n/a | Region | gene |
| 888 | 1305865 | Zfp451 | zinc finger protein 451 | | 9 | 35985441 | 36040991 | Rat | n/a | Region | gene |
| 887 | 1305739 | Adam23 | ADAM metallopeptidase domain 23 | | 9 | 64862649 | 65009718 | Rat | n/a | Region | gene |
| 886 | 1306260 | Zfand2b | zinc finger AN1-type containing 2B | | 9 | 76665466 | 76668447 | Rat | n/a | Region | gene |
| 885 | 1305046 | Stk11ip | serine/threonine kinase 11 interacting protein | | 9 | 77012297 | 77027989 | Rat | n/a | Region | gene |
| 884 | 1305747 | Stat4 | signal transducer and activator of transcription 4 | | 9 | 49472660 | 49588540 | Rat | n/a | Region | gene |
| 883 | 61970 | Ptp4a1 | protein tyrosine phosphatase 4A1 | | 9 | 33214201 | 33245046 | Rat | n/a | Region | gene |
| 882 | 1307318 | Stk36 | serine/threonine kinase 36 | | 9 | 76176922 | 76204423 | Rat | n/a | Region | gene |
| 881 | 1307321 | Slc39a10 | solute carrier family 39 member 10 | | 9 | 54836841 | 54960325 | Rat | n/a | Region | gene |
| 880 | 1306281 | Aamp | angio-associated, migratory cell protein | | 9 | 75863382 | 75869188 | Rat | n/a | Region | gene |
| 879 | 1306205 | Cdk15 | cyclin-dependent kinase 15 | | 9 | 60710787 | 60803638 | Rat | n/a | Region | gene |
| 878 | 1309930 | Spats2l | spermatogenesis associated, serine-rich 2-like | | 9 | 59319949 | 59493864 | Rat | n/a | Region | gene |
| 877 | 1306844 | Retreg2 | reticulophagy regulator family member 2 | | 9 | 76640282 | 76646400 | Rat | n/a | Region | gene |
| 876 | 1306705 | Tmem237 | transmembrane protein 237 | | 9 | 60533348 | 60569253 | Rat | n/a | Region | gene |
| 875 | 1309976 | Unc80 | unc-80 homolog, NALCN channel complex subunit | | 9 | 68011940 | 68190135 | Rat | n/a | Region | gene |
| 874 | 1306558 | Mrps9 | mitochondrial ribosomal protein S9 | | 9 | 45113554 | 45172375 | Rat | n/a | Region | gene |
| 873 | 1304775 | Ccdc150 | coiled-coil domain containing 150 | | 9 | 55793544 | 55897341 | Rat | n/a | Region | gene |
| 872 | 1306658 | Nabp1 | nucleic acid binding protein 1 | | 9 | 50098552 | 50133982 | Rat | n/a | Region | gene |
| 871 | 1307015 | Wnt10a | Wnt family member 10A | | 9 | 76349931 | 76362400 | Rat | n/a | Region | gene |
| 870 | 621782 | Il1rl2 | interleukin 1 receptor-like 2 | | 9 | 42591658 | 42639351 | Rat | n/a | Region | gene |
| 869 | 1307380 | Actr1b | actin related protein 1B | | 9 | 38928819 | 38938483 | Rat | n/a | Region | gene |
| 868 | 1308460 | Rnf149 | ring finger protein 149 | | 9 | 41826825 | 41854381 | Rat | n/a | Region | gene |
| 867 | 1308527 | Aff3 | ALF transcription elongation factor 3 | | 9 | 40399099 | 40856716 | Rat | n/a | Region | gene |
| 866 | 1307402 | Slc23a3 | solute carrier family 23, member 3 | | 9 | 76622621 | 76633188 | Rat | n/a | Region | gene |
| 865 | 1306566 | Dst | dystonin | | 9 | 36135657 | 36529617 | Rat | n/a | Region | gene |
| 864 | 1306715 | Rev1 | REV1, DNA directed polymerase | | 9 | 40278100 | 40351764 | Rat | n/a | Region | gene |
| 863 | 1306029 | Klf7 | KLF transcription factor 7 | | 9 | 65433683 | 65526372 | Rat | n/a | Region | gene |
| 862 | 3712 | Slc4a3 | solute carrier family 4 member 3 | | 9 | 77036243 | 77053940 | Rat | n/a | Region | gene |
| 861 | 1306071 | Inpp1 | inositol polyphosphate-1-phosphatase | | 9 | 48688037 | 48717793 | Rat | n/a | Region | gene |
| 860 | 1306073 | Obsl1 | obscurin like cytoskeletal adaptor 1 | | 9 | 76967802 | 76993771 | Rat | n/a | Region | gene |
| 859 | 1311495 | Cnot9 | CCR4-NOT transcription complex subunit 9 | | 9 | 76084269 | 76109111 | Rat | n/a | Region | gene |
| 858 | 1309276 | Prss39 | protease, serine, 39 | | 9 | 36695037 | 36713004 | Rat | n/a | Region | gene |
| 857 | 1310683 | Ccnyl1 | cyclin Y-like 1 | | 9 | 66071721 | 66121742 | Rat | n/a | Region | gene |
| 856 | 1311041 | Arid5a | AT-rich interaction domain 5A | | 9 | 38534612 | 38549467 | Rat | n/a | Region | gene |
| 855 | 1309752 | Hycc2 | hyccin PI4KA lipid kinase complex subunit 2 | | 9 | 60056883 | 60129176 | Rat | n/a | Region | gene |
| 854 | 1310398 | Ankrd23 | ankyrin repeat domain 23 | | 9 | 38773234 | 38778705 | Rat | n/a | Region | gene |
| 853 | 1309648 | Zfp142 | zinc finger protein 142 | | 9 | 76141053 | 76164784 | Rat | n/a | Region | gene |
| 852 | 1308686 | Ikzf2 | IKAROS family zinc finger 2 | | 9 | 71046038 | 71191296 | Rat | n/a | Region | gene |
| 851 | 1308387 | Raph1 | Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 | | 9 | 61907476 | 61990170 | Rat | n/a | Region | gene |
| 850 | 1308392 | Hibch | 3-hydroxyisobutyryl-CoA hydrolase | | 9 | 48590097 | 48669896 | Rat | n/a | Region | gene |
| 849 | 1359409 | Tmbim1 | transmembrane BAX inhibitor motif containing 1 | | 9 | 75871835 | 75889366 | Rat | n/a | Region | gene |
| 848 | 620528 | Aox1 | aldehyde oxidase 1 | | 9 | 59579621 | 59658772 | Rat | n/a | Region | gene |
| 847 | 1310450 | Atg9a | autophagy related 9A | | 9 | 76677403 | 76688050 | Rat | n/a | Region | gene |
| 846 | 1306867 | Rab23 | RAB23, member RAS oncogene family | | 9 | 35943522 | 35967367 | Rat | n/a | Region | gene |
| 845 | 1310819 | Cracdl | CRACD like | | 9 | 39834321 | 39950763 | Rat | n/a | Region | gene |
| 844 | 1310329 | Nif3l1 | NGG1 interacting factor 3 like 1 | | 9 | 59980101 | 60001490 | Rat | n/a | Region | gene |
| 843 | 1311885 | Hsfy2 | heat shock transcription factor, Y linked 2 | | 9 | 58182415 | 58183828 | Rat | n/a | Region | gene |
| 842 | 1311888 | Bivm | basic, immunoglobulin-like variable motif containing | | 9 | 46268758 | 46305038 | Rat | n/a | Region | gene |
| 841 | 1311469 | Clk1 | CDC-like kinase 1 | | 9 | 59947774 | 59959002 | Rat | n/a | Region | gene |
| 840 | 1311975 | Aox4 | aldehyde oxidase 4 | | 9 | 59761238 | 59818169 | Rat | n/a | Region | gene |
| 839 | 735175 | Cnppd1 | cyclin Pas1/PHO80 domain containing 1 | | 9 | 76633475 | 76640164 | Rat | n/a | Region | gene |
| 838 | 1310772 | Tgfbrap1 | transforming growth factor, beta receptor associated protein 1 | | 9 | 45320975 | 45371329 | Rat | n/a | Region | gene |
| 837 | 1311586 | Ptpn18 | protein tyrosine phosphatase, non-receptor type 18 | | 9 | 36672325 | 36689963 | Rat | n/a | Region | gene |
| 836 | 1311527 | Mars2 | methionyl-tRNA synthetase 2, mitochondrial | | 9 | 56720408 | 56729991 | Rat | n/a | Region | gene |
| 835 | 1559504 | Ankrd39 | ankyrin repeat domain 39 | | 9 | 38780291 | 38790177 | Rat | n/a | Region | gene |
| 834 | 1560678 | Rufy4 | RUN and FYVE domain containing 4 | | 9 | 75702937 | 75727719 | Rat | n/a | Region | gene |
| 833 | 2300146 | Ormdl1 | ORMDL sphingolipid biosynthesis regulator 1 | | 9 | 48243365 | 48253316 | Rat | n/a | Region | gene |
| 832 | 1309266 | Tmem131 | transmembrane protein 131 | | 9 | 39016470 | 39162841 | Rat | n/a | Region | gene |
| 831 | 1309474 | Glb1l | galactosidase, beta 1-like | | 9 | 76693325 | 76705548 | Rat | n/a | Region | gene |
| 830 | 1307700 | Mitd1 | microtubule interacting and trafficking domain containing 1 | | 9 | 40113943 | 40125280 | Rat | n/a | Region | gene |
| 829 | 1309218 | Hs6st1 | heparan sulfate 6-O-sulfotransferase 1 | | 9 | 38283502 | 38322684 | Rat | n/a | Region | gene |
| 828 | 1309220 | Kansl3 | KAT8 regulatory NSL complex subunit 3 | | 9 | 38562170 | 38605757 | Rat | n/a | Region | gene |
| 827 | 1308463 | Imp4 | IMP U3 small nucleolar ribonucleoprotein 4 | | 9 | 36654127 | 36659265 | Rat | n/a | Region | gene |
| 826 | 1310392 | Bend6 | BEN domain containing 6 | | 9 | 36081033 | 36135309 | Rat | n/a | Region | gene |
| 825 | 1311415 | Eef1b2 | eukaryotic translation elongation factor 1 beta 2 | | 9 | 64580163 | 64582737 | Rat | n/a | Region | gene |
| 824 | 1307874 | Mdh1b | malate dehydrogenase 1B | | 9 | 65120370 | 65168008 | Rat | n/a | Region | gene |
| 823 | 1307883 | Fastkd2 | FAST kinase domains 2 | | 9 | 65166148 | 65188184 | Rat | n/a | Region | gene |
| 822 | 1309095 | Tex30 | testis expressed 30 | | 9 | 46243416 | 46252273 | Rat | n/a | Region | gene |
| 821 | 1310954 | Plekhb2 | pleckstrin homology domain containing B2 | | 9 | 37049580 | 37082231 | Rat | n/a | Region | gene |
| 820 | 1308698 | Prkag3 | protein kinase AMP-activated non-catalytic subunit gamma 3 | | 9 | 76295715 | 76304959 | Rat | n/a | Region | gene |
| 819 | 1305965 | Nck2 | NCK adaptor protein 2 | | 9 | 45713979 | 45840330 | Rat | n/a | Region | gene |
| 818 | 1308196 | Mrpl30 | mitochondrial ribosomal protein L30 | | 9 | 40125352 | 40136189 | Rat | n/a | Region | gene |
| 817 | 727910 | Pincl | pregnancy induced noncoding RNA like | | 9 | 74982849 | 74999760 | Rat | n/a | Region | gene |
| 816 | 1307304 | Rftn2 | raftlin family member 2 | | 9 | 56651617 | 56707830 | Rat | n/a | Region | gene |
| 815 | 1306253 | Gpr45 | G protein-coupled receptor 45 | | 9 | 45221364 | 45309713 | Rat | n/a | Region | gene |
| 814 | 1307676 | Fam117b | family with sequence similarity 117, member B | | 9 | 61340284 | 61418531 | Rat | n/a | Region | gene |
| 813 | 1308589 | Il18r1 | interleukin 18 receptor 1 | | 9 | 42727416 | 42760971 | Rat | n/a | Region | gene |
| 812 | 1307151 | Plekhm3 | pleckstrin homology domain containing M3 | | 9 | 66166233 | 66325332 | Rat | n/a | Region | gene |
| 811 | 1309681 | Npas2 | neuronal PAS domain protein 2 | | 9 | 41463361 | 41642322 | Rat | n/a | Region | gene |
| 810 | 1305322 | Map4k4 | mitogen-activated protein kinase kinase kinase kinase 4 | | 9 | 42200708 | 42326708 | Rat | n/a | Region | gene |
| 809 | 1308839 | Tmeff2 | transmembrane protein with EGF-like and two follistatin-like domains 2 | | 9 | 50445947 | 50733473 | Rat | n/a | Region | gene |
| 808 | 1310276 | Lipt1 | lipoyltransferase 1 | | 9 | 40107938 | 40118268 | Rat | n/a | Region | gene |
| 807 | 2011 | Acadl | acyl-CoA dehydrogenase, long chain | | 9 | 68333981 | 68372149 | Rat | n/a | Region | gene |
| 806 | 1306941 | C9h2orf69 | similar to human chromosome 2 open reading frame 69 | | 9 | 58949821 | 58958456 | Rat | n/a | Region | gene |
| 805 | 1311393 | Lman2l | lectin, mannose-binding 2-like | | 9 | 38661709 | 38685244 | Rat | n/a | Region | gene |
| 804 | 1308450 | Sgo2 | shugoshin 2 | | 9 | 59548605 | 59573229 | Rat | n/a | Region | gene |
| 803 | 1311557 | Rnf25 | ring finger protein 25 | | 9 | 76170037 | 76176924 | Rat | n/a | Region | gene |
| 802 | 1307926 | Cnnm3 | cyclin and CBS domain divalent metal cation transport mediator 3 | | 9 | 38755374 | 38770740 | Rat | n/a | Region | gene |
| 801 | 1309663 | Pdcl3 | phosducin-like 3 | | 9 | 41234322 | 41243769 | Rat | n/a | Region | gene |
| 800 | 1309185 | Gtf3c3 | general transcription factor IIIC subunit 3 | | 9 | 55882252 | 55943037 | Rat | n/a | Region | gene |
| 799 | 1310553 | C9h2orf49 | similar to human chromosome 2 open reading frame 49 | | 9 | 45371396 | 45382123 | Rat | n/a | Region | gene |
| 798 | 1310372 | Als2 | alsin Rho guanine nucleotide exchange factor ALS2 | | 9 | 60613182 | 60686394 | Rat | n/a | Region | gene |
| 797 | 1562029 | Kiaa2012 | KIAA2012 homolog | | 9 | 60967398 | 61076596 | Rat | n/a | Region | gene |
| 796 | 1359633 | Neurl3 | neuralized E3 ubiquitin protein ligase 3 | | 9 | 38494486 | 38503352 | Rat | n/a | Region | gene |
| 795 | 1563696 | Tmem182 | transmembrane protein 182 | | 9 | 43059432 | 43111318 | Rat | n/a | Region | gene |
| 794 | 1359668 | Aox2 | aldehyde oxidase 2 | | 9 | 59828403 | 59916175 | Rat | n/a | Region | gene |
| 793 | 1560909 | Cnot11 | CCR4-NOT transcription complex, subunit 11 | | 9 | 41814923 | 41824626 | Rat | n/a | Region | gene |
| 792 | 1562137 | Lonrf2 | LON peptidase N-terminal domain and ring finger 2 | | 9 | 41033125 | 41070551 | Rat | n/a | Region | gene |
| 791 | 1564591 | Fam178b | family with sequence similarity 178, member B | | 9 | 38805864 | 38913681 | Rat | n/a | Region | gene |
| 790 | 1562560 | Vwa3b | von Willebrand factor A domain containing 3B | | 9 | 39249523 | 39419614 | Rat | n/a | Region | gene |
| 789 | 1562461 | Rplp1-ps1 | ribosomal protein lateral stalk subunit P1, pseudogene 1 | | 9 | 36849932 | 36855302 | Rat | n/a | Region | gene |
| 788 | 1560005 | Zdbf2 | zinc finger, DBF-type containing 2 | | 9 | 64672974 | 64748446 | Rat | n/a | Region | gene |
| 787 | 1562431 | Pced1bl1 | PC-esterase domain containing 1B like 1 | | 9 | 70859554 | 70861542 | Rat | n/a | Region | gene |
| 786 | 1559449 | Stradb | STE20 related adaptor beta | | 9 | 60414182 | 60433084 | Rat | n/a | Region | gene |
| 785 | 1562212 | Mfsd9 | major facilitator superfamily domain containing 9 | | 9 | 43019611 | 43039100 | Rat | n/a | Region | gene |
| 784 | 1560420 | Amer3 | APC membrane recruitment protein 3 | | 9 | 36790355 | 36802341 | Rat | n/a | Region | gene |
| 783 | 1560421 | Nemp2 | nuclear envelope integral membrane protein 2 | | 9 | 48861252 | 48880565 | Rat | n/a | Region | gene |
| 782 | 1562399 | Rps2-ps15 | ribosomal protein S2, pseudogene 15 | | 9 | 60699615 | 60700505 | Rat | n/a | Region | gene |
| 781 | 1564447 | H3f3al3 | H3.3 histone A like 3 | | 9 | 42494007 | 42495112 | Rat | n/a | Region | gene |
| 780 | 1562317 | Mfsd6 | major facilitator superfamily domain containing 6 | | 9 | 48773171 | 48858471 | Rat | n/a | Region | gene |
| 779 | 1562333 | Mreg | melanoregulin | | 9 | 73786727 | 73842081 | Rat | n/a | Region | gene |
| 778 | 1560806 | Golph3l-ps1 | golgi phosphoprotein 3-like, pseudogene 1 | | 9 | 45890492 | 45891363 | Rat | n/a | Region | gene |
| 777 | 1560533 | Rps14-ps2 | ribosomal protein S14, pseudogene 2 | | 9 | 37153290 | 37153723 | Rat | n/a | Region | gene |
| 776 | 1561893 | Ankrd44 | ankyrin repeat domain 44 | | 9 | 56126746 | 56427661 | Rat | n/a | Region | gene |
| 775 | 1564239 | Dbi-ps3 | diazepam binding inhibitor, acyl-CoA binding protein, pseudogene 3 | | 9 | 61336528 | 61336927 | Rat | n/a | Region | gene |
| 774 | 1562067 | Cdca3l1 | cell division cycle associated 3 like 1 | | 9 | 46506533 | 46507525 | Rat | n/a | Region | gene |
| 773 | 1562369 | Satb2 | SATB homeobox 2 | | 9 | 58348027 | 58534256 | Rat | n/a | Region | gene |
| 772 | 1562530 | Cdk5r2 | cyclin-dependent kinase 5 regulatory subunit 2 | | 9 | 76416251 | 76417719 | Rat | n/a | Region | gene |
| 771 | 1359328 | Aox3 | aldehyde oxidase 3 | | 9 | 59664784 | 59749701 | Rat | n/a | Region | gene |
| 770 | 3721 | Slc9a4 | solute carrier family 9 member A4 | | 9 | 42825334 | 42879729 | Rat | n/a | Region | gene |
| 769 | 1359509 | Coq10b | coenzyme Q10B | | 9 | 56553751 | 56573671 | Rat | n/a | Region | gene |
| 768 | 1359511 | Pms1 | PMS1 homolog 1, mismatch repair system component | | 9 | 48229403 | 48340237 | Rat | n/a | Region | gene |
| 767 | 1359338 | Nhej1 | nonhomologous end-joining factor 1 | | 9 | 76526322 | 76622488 | Rat | n/a | Region | gene |
| 766 | 1359345 | Cavin2 | caveolae associated protein 2 | | 9 | 50302079 | 50314096 | Rat | n/a | Region | gene |
| 765 | 1560724 | Rfx8 | regulatory factor X8 | | 9 | 41957589 | 42021432 | Rat | n/a | Region | gene |
| 764 | 1562818 | Rpl35-ps10 | ribosomal protein L35, pseudogene 10 | | 9 | 44873772 | 44874628 | Rat | n/a | Region | gene |
| 763 | 1561425 | Mettl21c | methyltransferase 21C, AARS1 lysine | | 9 | 46130451 | 46145128 | Rat | n/a | Region | gene |
| 762 | 1561071 | Ankar | ankyrin and armadillo repeat containing | | 9 | 48141534 | 48215400 | Rat | n/a | Region | gene |
| 761 | 1560644 | Gmppa | GDP-mannose pyrophosphorylase A | | 9 | 76926724 | 76934274 | Rat | n/a | Region | gene |
| 760 | 1359122 | NMS | neuromedin S | | 9 | 41169634 | 41180697 | Rat | n/a | Region | gene |
| 759 | 1311269 | Tyw5 | tRNA-yW synthesizing protein 5 | | 9 | 58961100 | 58979188 | Rat | n/a | Region | gene |
| 758 | 1359242 | Ankzf1 | ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 | | 9 | 76688194 | 76695162 | Rat | n/a | Region | gene |
| 757 | 1560362 | Arpc5l-ps1 | actin related protein 2/3 complex, subunit 5-like, pseudogene 1 | | 9 | 45263352 | 45264349 | Rat | n/a | Region | gene |
| 756 | 1562837 | Sema4c | semaphorin 4C | | 9 | 38791668 | 38802171 | Rat | n/a | Region | gene |
| 755 | 1564869 | Wdr75 | WD repeat domain 75 | | 9 | 47903214 | 47933399 | Rat | n/a | Region | gene |
| 754 | 1559527 | Boll | boule homolog, RNA binding protein | | 9 | 56734890 | 56859917 | Rat | n/a | Region | gene |
| 753 | 1560357 | Ppia-ps15 | peptidylprolyl isomerase A, pseudogene 15 | | 9 | 76313005 | 76314011 | Rat | n/a | Region | gene |
| 752 | 1310737 | Ndufb3 | NADH:ubiquinone oxidoreductase subunit B3 | | 9 | 60129240 | 60139452 | Rat | n/a | Region | gene |
| 751 | 1564056 | Creg2 | cellular repressor of E1A-stimulated genes 2 | | 9 | 41872000 | 41945413 | Rat | n/a | Region | gene |
| 750 | 1564890 | Rpe | ribulose-5-phosphate-3-epimerase | | 9 | 68191027 | 68211295 | Rat | n/a | Region | gene |
| 749 | 1311844 | Orc2 | origin recognition complex, subunit 2 | | 9 | 60001631 | 60038301 | Rat | n/a | Region | gene |
| 748 | 1562143 | Ctps1-ps2 | CTP synthase 1, pseudogene 2 | | 9 | 47802177 | 47803574 | Rat | n/a | Region | gene |
| 747 | 1560332 | Lyg1 | lysozyme G1 | | 9 | 40171123 | 40182869 | Rat | n/a | Region | gene |
| 746 | 1359458 | Chpf | chondroitin polymerizing factor | | 9 | 76963178 | 76967878 | Rat | n/a | Region | gene |
| 745 | 1586396 | Ube2v1-ps22 | ubiquitin conjugating enzyme E2 V1, pseudogene 22 | | 9 | 33633770 | 33634238 | Rat | n/a | Region | gene |
| 744 | 1565450 | C2cd6 | C2 calcium dependent domain containing 6 | | 9 | 60434926 | 60530842 | Rat | n/a | Region | gene |
| 743 | 1359658 | Bcs1l | BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone | | 9 | 76164925 | 76168940 | Rat | n/a | Region | gene |
| 742 | 1586604 | Tmem258b | transmembrane protein 258 B | | 9 | 56450373 | 56450755 | Rat | n/a | Region | gene |
| 741 | 1583848 | Dnpep | aspartyl aminopeptidase | | 9 | 76799931 | 76808841 | Rat | n/a | Region | gene |
| 740 | 1562188 | Cfc1 | cripto, FRL-1, cryptic family 1 | | 9 | 36742106 | 36751931 | Rat | n/a | Region | gene |
| 739 | 1561330 | Prss40 | protease, serine, 40 | | 9 | 36762170 | 36770979 | Rat | n/a | Region | gene |
| 738 | 1564820 | Kctd18 | potassium channel tetramerization domain containing 18 | | 9 | 59502220 | 59566857 | Rat | n/a | Region | gene |
| 737 | 1583985 | Fam168b | family with sequence similarity 168, member B | | 9 | 37005569 | 37038631 | Rat | n/a | Region | gene |
| 736 | 1584383 | Rps3-ps8 | ribosomal protein S3, pseudogene 8 | | 9 | 47115406 | 47116385 | Rat | n/a | Region | gene |
| 735 | 1565095 | Coa5 | cytochrome C oxidase assembly factor 5 | | 9 | 39651459 | 39664870 | Rat | n/a | Region | gene |
| 734 | 1582820 | Tmem169 | transmembrane protein 169 | | 9 | 73926553 | 73950679 | Rat | n/a | Region | gene |
| 733 | 1565501 | Vwc2l | von Willebrand factor C domain containing 2 like | | 9 | 72252793 | 72448543 | Rat | n/a | Region | gene |
| 732 | 1565062 | Spag16 | sperm associated antigen 16 | | 9 | 71333005 | 72252772 | Rat | n/a | Region | gene |
| 731 | 1565371 | Bnip3-ps1 | BCL2 interacting protein 3, pseudogene 1 | | 9 | 48762804 | 48764417 | Rat | n/a | Region | gene |
| 730 | 1359623 | Tuba4a | tubulin, alpha 4A | | 9 | 76709617 | 76714327 | Rat | n/a | Region | gene |
| 729 | 1563002 | Cfap65 | cilia and flagella associated protein 65 | | 9 | 76459211 | 76494199 | Rat | n/a | Region | gene |
| 728 | 1586327 | Fus-ps6 | FUS RNA binding protein, pseudogene 6 | | 9 | 35549140 | 35550782 | Rat | n/a | Region | gene |
| 727 | 1586353 | Crygf | crystallin, gamma F | | 9 | 67448265 | 67450429 | Rat | n/a | Region | gene |
| 726 | 1588771 | Cpo | carboxypeptidase O | | 9 | 65319996 | 65338250 | Rat | n/a | Region | gene |
| 725 | 1590797 | Marchf4 | membrane associated ring-CH-type finger 4 | | 9 | 74078437 | 74196070 | Rat | n/a | Region | gene |
| 724 | 1590798 | Pum3-ps2 | pumilio RNA-binding family member 3, pseudogene 2 | | 9 | 68480846 | 68482298 | Rat | n/a | Region | gene |
| 723 | 1590799 | Kansl1l | KAT8 regulatory NSL complex subunit 1-like | | 9 | 68211151 | 68316992 | Rat | n/a | Region | gene |
| 722 | 1590802 | Rpl6-ps7 | ribosomal protein L6, pseudogene 7 | | 9 | 59082270 | 59083124 | Rat | n/a | Region | gene |
| 721 | 1590803 | Rpl11-ps6 | ribosomal protein L11, pseudogene 6 | | 9 | 56469023 | 56469614 | Rat | n/a | Region | gene |
| 720 | 1590804 | Eno1-ps2 | enolase 1, pseudogene 2 | | 9 | 54730302 | 54750752 | Rat | n/a | Region | gene |
| 719 | 1590805 | Clip1-ps1 | CAP-GLY domain containing linker protein 1, pseudogene 1 | | 9 | 54099063 | 54102686 | Rat | n/a | Region | gene |
| 718 | 1590806 | Cct6a-ps1 | chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 1 | | 9 | 53338399 | 53339815 | Rat | n/a | Region | gene |
| 717 | 1590809 | Trir-ps2 | telomerase RNA component interacting RNase, pseudogene 2 | | 9 | 35679607 | 35690156 | Rat | n/a | Region | gene |
| 716 | 1587872 | Pals1-ps1 | protein associated with LIN7 1, MAGUK p55 family member, pseudogene 1 | | 9 | 54500256 | 54502541 | Rat | n/a | Region | gene |
| 715 | 1591348 | Mettl6-ps1 | methyltransferase like 6, pseudogene 1 | | 9 | 51514746 | 51515605 | Rat | n/a | Region | gene |
| 714 | 1591035 | Dnajb2 | DnaJ heat shock protein family (Hsp40) member B2 | | 9 | 76731060 | 76739278 | Rat | n/a | Region | gene |
| 713 | 1590771 | Nono-ps13 | non-POU domain containing, octamer-binding, pseudogene 13 | | 9 | 53049502 | 53055409 | Rat | n/a | Region | gene |
| 712 | 1590772 | Hspd1-ps13 | heat shock protein family D (Hsp60) member 1, pseudogene 13 | | 9 | 46991457 | 46996798 | Rat | n/a | Region | gene |
| 711 | 1585200 | Cfl2-ps2 | cofilin-2, pseudogene 2 | | 9 | 35934456 | 35934941 | Rat | n/a | Region | gene |
| 710 | 1585173 | Bag2 | BAG cochaperone 2 | | 9 | 35970033 | 35980677 | Rat | n/a | Region | gene |
| 709 | 1586666 | C9h2orf66 | similar to human chromosome 2 open reading frame 66 | | 9 | 55945806 | 55949855 | Rat | n/a | Region | gene |
| 708 | 1359362 | Flacc1 | flagellum associated containing coiled-coil domains 1 | | 9 | 60315581 | 60343692 | Rat | n/a | Region | gene |
| 707 | 1584991 | Crygb | crystallin, gamma B | | 9 | 66461460 | 66463520 | Rat | n/a | Region | gene |
| 706 | 1584992 | Pard3b | par-3 family cell polarity regulator beta | | 9 | 63038435 | 64067178 | Rat | n/a | Region | gene |
| 705 | 1359670 | Ndufs1 | NADH:ubiquinone oxidoreductase core subunit S1 | | 9 | 64546430 | 64579751 | Rat | n/a | Region | gene |
| 704 | 1586176 | Ercc5 | ERCC excision repair 5, endonuclease | | 9 | 46309477 | 46354478 | Rat | n/a | Region | gene |
| 703 | 1586177 | Dnajc14-ps2 | DnaJ heat shock protein family (Hsp40) member C14, pseudogene 2 | | 9 | 46177463 | 46179852 | Rat | n/a | Region | gene |
| 702 | 1586179 | Arhgef4 | Rho guanine nucleotide exchange factor 4 | | 9 | 36861800 | 37005079 | Rat | n/a | Region | gene |
| 701 | 1583681 | Fer1l5 | fer-1-like family member 5 | | 9 | 38605835 | 38661869 | Rat | n/a | Region | gene |
| 700 | 1593480 | Paics-ps7 | phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 7 | | 9 | 62901274 | 62922952 | Rat | n/a | Region | gene |
| 699 | 1596071 | Catip | ciliogenesis associated TTC17 interacting protein | | 9 | 75945960 | 75953618 | Rat | n/a | Region | gene |
| 698 | 1596173 | Set-ps16 | Set nuclear proto-oncogene, pseudogene 16 | | 9 | 61108952 | 61113900 | Rat | n/a | Region | gene |
| 697 | 1592067 | Pikfyve | phosphoinositide kinase, FYVE-type zinc finger containing | | 9 | 66563747 | 66657873 | Rat | n/a | Region | gene |
| 696 | 1595217 | Cryga | crystallin, gamma A | | 9 | 66482176 | 66484638 | Rat | n/a | Region | gene |
| 695 | 1595308 | Smc6-ps1 | structural maintenance of chromosomes 6, pseudogene 1 | | 9 | 48521146 | 48522274 | Rat | n/a | Region | gene |
| 694 | 1596736 | Mettl21cl1 | methyltransferase like 21C-like 1 | | 9 | 46382141 | 46397299 | Rat | n/a | Region | gene |
| 693 | 1596909 | Tcf19-ps1 | transcription factor 19, pseudogene 1 | | 9 | 66987524 | 66988262 | Rat | n/a | Region | gene |
| 692 | 1592054 | Hsp90ab1-ps13 | heat shock protein 90 alpha family class B member 1, pseudogene 13 | | 9 | 45545063 | 45547427 | Rat | n/a | Region | gene |
| 691 | 1594742 | Ttll4 | tubulin tyrosine ligase like 4 | | 9 | 76221659 | 76258219 | Rat | n/a | Region | gene |
| 690 | 1593244 | Hecw2 | HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 | | 9 | 55359462 | 55753106 | Rat | n/a | Region | gene |
| 689 | 1595408 | Ahcy-ps5 | adenosylhomocysteinase, pseudogene 5 | | 9 | 47023990 | 47025181 | Rat | n/a | Region | gene |
| 688 | 1594799 | Nbeal1 | neurobeachin-like 1 | | 9 | 61575154 | 61743896 | Rat | n/a | Region | gene |
| 687 | 1590313 | Psma7-ps3 | proteasome 20S subunit alpha 7, pseudogene 3 | | 9 | 62412709 | 62415587 | Rat | n/a | Region | gene |
| 686 | 1595491 | Tbc1d8 | TBC1 domain family, member 8 | | 9 | 41651394 | 41761432 | Rat | n/a | Region | gene |
| 685 | 1597333 | Rps8-ps13 | ribosomal protein S8, pseudogene 13 | | 9 | 74664600 | 74685585 | Rat | n/a | Region | gene |
| 684 | 1588705 | Dnajb6-ps6 | DnaJ heat shock protein family (Hsp40) member B6, pseudogene 6 | | 9 | 32798746 | 32799447 | Rat | n/a | Region | gene |
| 683 | 1586334 | Zfp622l1 | zinc finger protein 622 like 1 | | 9 | 35478603 | 35480175 | Rat | n/a | Region | gene |
| 682 | 1598796 | Myl1 | myosin, light chain 1 | | 9 | 68437514 | 68458256 | Rat | n/a | Region | gene |
| 681 | 1597774 | Plp2l1 | proteolipid protein 2 like 1 | | 9 | 48076775 | 48077809 | Rat | n/a | Region | gene |
| 680 | 1596493 | C9h2orf88 | similar to human chromosome 2 open reading frame 88 | | 9 | 48539140 | 48584882 | Rat | n/a | Region | gene |
| 679 | 1596442 | Pgap2-ps2 | post-GPI attachment to proteins 2, pseudogene 2 | | 9 | 48741571 | 48760802 | Rat | n/a | Region | gene |
| 678 | 2300155 | Pnkd | PNKD metallo-beta-lactamase domain containing | | 9 | 75868620 | 75937126 | Rat | n/a | Region | gene |
| 677 | 2319715 | Usp37 | ubiquitin specific peptidase 37 | | 9 | 76018863 | 76118732 | Rat | n/a | Region | gene |
| 676 | 2319152 | Tmem198 | transmembrane protein 198 | | 9 | 76968079 | 76974131 | Rat | n/a | Region | gene |
| 675 | 2318113 | Zfp706-ps1 | zinc finger protein 706, pseudogene 1 | | 9 | 32970669 | 32970915 | Rat | n/a | Region | gene |
| 674 | 2319947 | Rpl37a | ribosomal protein L37A | | 9 | 74298843 | 74300926 | Rat | n/a | Region | gene |
| 673 | 2319343 | Atp5mc2l1 | ATP synthase membrane subunit c locus 2 like 1 | | 9 | 76549370 | 76549840 | Rat | n/a | Region | gene |
| 672 | 2318998 | Cacybp-ps1 | calcyclin binding protein, pseudogene 1 | | 9 | 54313125 | 54313795 | Rat | n/a | Region | gene |
| 671 | 2321317 | Rpl37-ps5 | ribosomal protein L37, pseudogene 5 | | 9 | 64417475 | 64417847 | Rat | n/a | Region | gene |
| 670 | 2320870 | Hmga1-ps2 | high mobility group AT-hook 1, pseudogene 2 | | 9 | 65714206 | 65715579 | Rat | n/a | Region | gene |
| 669 | 2320917 | Dytn | dystrotelin | | 9 | 65037378 | 65098549 | Rat | n/a | Region | gene |
| 668 | 2320919 | Rps8-ps5 | ribosomal protein S8, pseudogene 5 | | 9 | 43725840 | 43726444 | Rat | n/a | Region | gene |
| 667 | 2321037 | Vdac2-ps1 | voltage-dependent anion channel 2, pseudogene 1 | | 9 | 73890450 | 73891132 | Rat | n/a | Region | gene |
| 666 | 2321064 | Cox5b-ps1 | cytochrome c oxidase subunit 5B, pseudogene 1 | | 9 | 64792694 | 64793077 | Rat | n/a | Region | gene |
| 665 | 2321066 | Cox6a1-ps2 | cytochrome c oxidase subunit 6A1, pseudogene 2 | | 9 | 42169747 | 42170079 | Rat | n/a | Region | gene |
| 664 | 2321905 | Fzd7 | frizzled class receptor 7 | | 9 | 60931433 | 60934252 | Rat | n/a | Region | gene |
| 663 | 2323350 | Got2-ps3 | glutamic-oxaloacetic transaminase 2, pseudogene 3 | | 9 | 47995386 | 48000701 | Rat | n/a | Region | gene |
| 662 | 2323511 | Cct6a-ps16 | chaperonin containing TCP1 subunit 6A, pseudogene 16 | | 9 | 53250906 | 53252183 | Rat | n/a | Region | gene |
| 661 | 2323551 | Srek1-ps1 | splicing regulatory glutamic acid and lysine rich protein 1, pseudogene 1 | | 9 | 67571328 | 67632585 | Rat | n/a | Region | gene |
| 660 | 2323628 | Tmem19-ps1 | transmembrane protein 19, pseudogene 1 | | 9 | 52752078 | 52753081 | Rat | n/a | Region | gene |
| 659 | 2323675 | Cyb5d1-ps1 | cytochrome b5 domain containing 1, pseudogene 1 | | 9 | 52408815 | 52409577 | Rat | n/a | Region | gene |
| 658 | 2323836 | Ccdc126-ps1 | coiled-coil domain containing 126, pseudogene 1 | | 9 | 51244912 | 51245507 | Rat | n/a | Region | gene |
| 657 | 2325360 | Mir375 | microRNA 375 | | 9 | 76457911 | 76457985 | Rat | n/a | Region | gene |
| 656 | 2325394 | Mir26b | microRNA 26b | | 9 | 75976596 | 75976680 | Rat | n/a | Region | gene |
| 655 | 6484877 | Hdac1-ps10 | Histone deacetylase 1, pseudogene 10 | | 9 | 38172777 | 38173577 | Rat | n/a | Region | gene |
| 654 | 6486560 | Srsf7-ps4 | serine and arginine rich splicing factor 7, pseudogene 4 | | 9 | 48587865 | 48589638 | Rat | n/a | Region | gene |
| 653 | 6498974 | Nelfe-ps1 | negative elongation factor complex member E, pseudogene 1 | | 9 | 54229368 | 54231747 | Rat | n/a | Region | gene |
| 652 | 6499281 | LOC100910304 | uncharacterized LOC100910304 | | 9 | 43451484 | 43528710 | Rat | n/a | Region | gene |
| 651 | 6496811 | Lyg2 | lysozyme G2 | | 9 | 40141144 | 40150821 | Rat | n/a | Region | gene |
| 650 | 6500396 | Eef1a1-ps1 | eukaryotic translation elongation factor 1 alpha 1, pseudogene 1 | | 9 | 33804763 | 33825540 | Rat | n/a | Region | gene |
| 649 | 6500780 | Swi5-ps1 | SWI5 homologous recombination repair protein, pseudogene 1 | | 9 | 35633690 | 35641769 | Rat | n/a | Region | gene |
| 648 | 6501057 | LOC100909946 | uncharacterized LOC100909946 | | 9 | 60195007 | 60199453 | Rat | n/a | Region | gene |
| 647 | 6501168 | C9h2orf92 | similar to human chromosome 2 open reading frame 92 | | 9 | 38943927 | 38984878 | Rat | n/a | Region | gene |
| 646 | 6501582 | LOC100909803 | uncharacterized LOC100909803 | | 9 | 38481096 | 38488323 | Rat | n/a | Region | gene |
| 645 | 7527018 | Tubb4b-ps4 | tubulin, beta 4B class IVb, pseudogene 4 | | 9 | 71859659 | 71861139 | Rat | n/a | Region | gene |
| 644 | 7505088 | LOC102549484 | uncharacterized LOC102549484 | | 9 | 58899704 | 58949945 | Rat | n/a | Region | gene |
| 643 | 7500673 | LOC102554222 | uncharacterized LOC102554222 | | 9 | 38502553 | 38512621 | Rat | n/a | Region | gene |
| 642 | 7506283 | LOC102549980 | uncharacterized LOC102549980 | | 9 | 76494186 | 76502960 | Rat | n/a | Region | gene |
| 641 | 7613346 | LOC102549950 | uncharacterized LOC102549950 | | 9 | 43739344 | 43744575 | Rat | n/a | Region | gene |
| 640 | 7647959 | LOC102551615 | uncharacterized LOC102551615 | | 9 | 36232877 | 36236460 | Rat | n/a | Region | gene |
| 639 | 7648480 | LOC102554721 | L-lactate dehydrogenase B chain-like | | 9 | 75093647 | 75094902 | Rat | n/a | Region | gene |
| 638 | 7651604 | Mettl21a | methyltransferase 21A, HSPA lysine | | 9 | 65934253 | 65999964 | Rat | n/a | Region | gene |
| 637 | 7652959 | LOC102554186 | uncharacterized LOC102554186 | | 9 | 73266606 | 73278080 | Rat | n/a | Region | gene |
| 636 | 7559628 | LOC102550477 | uncharacterized LOC102550477 | | 9 | 76858329 | 76873352 | Rat | n/a | Region | gene |
| 635 | 7574954 | LOC102549320 | uncharacterized LOC102549320 | | 9 | 58527236 | 58603337 | Rat | n/a | Region | gene |
| 634 | 7638136 | Foxo1l | forkhead box O1 like | | 9 | 36636617 | 36646847 | Rat | n/a | Region | gene |
| 633 | 7624990 | LOC102555358 | uncharacterized LOC102555358 | | 9 | 74093160 | 74105239 | Rat | n/a | Region | gene |
| 632 | 7626358 | LOC102548410 | uncharacterized LOC102548410 | | 9 | 64383162 | 64410799 | Rat | n/a | Region | gene |
| 631 | 7640284 | Aasdhppt-ps1 | aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase, pseudogene 1 | | 9 | 50735249 | 50746852 | Rat | n/a | Region | gene |
| 630 | 7594970 | Nop16-ps2 | NOP16 nucleolar protein, pseudogene 2 | | 9 | 64536349 | 64546088 | Rat | n/a | Region | gene |
| 629 | 7642363 | LOC102548134 | uncharacterized LOC102548134 | | 9 | 74595181 | 74603935 | Rat | n/a | Region | gene |
| 628 | 7590823 | LOC102548289 | uncharacterized LOC102548289 | | 9 | 33222662 | 33247053 | Rat | n/a | Region | gene |
| 627 | 7595922 | LOC102548093 | uncharacterized LOC102548093 | | 9 | 62750914 | 62757597 | Rat | n/a | Region | gene |
| 626 | 7543919 | Npm1-ps7 | nucleophosmin 1, pseudogene 7 | | 9 | 50562443 | 50587615 | Rat | n/a | Region | gene |
| 625 | 7564863 | LOC102548232 | uncharacterized LOC102548232 | | 9 | 74700076 | 74708768 | Rat | n/a | Region | gene |
| 624 | 7694989 | LOC102547940 | uncharacterized LOC102547940 | | 9 | 74374308 | 74378142 | Rat | n/a | Region | gene |
| 623 | 7695235 | LOC102554903 | uncharacterized LOC102554903 | | 9 | 76714747 | 76730584 | Rat | n/a | Region | gene |
| 622 | 7704514 | LOC102554970 | uncharacterized LOC102554970 | | 9 | 73649054 | 73665651 | Rat | n/a | Region | gene |
| 621 | 7688151 | Pantr1 | POU3F3 adjacent non-coding transcript 1 | | 9 | 44898338 | 44943631 | Rat | n/a | Region | gene |
| 620 | 7688659 | LOC102552040 | uncharacterized LOC102552040 | | 9 | 66433366 | 66440952 | Rat | n/a | Region | gene |
| 619 | 7736852 | LOC102547711 | uncharacterized LOC102547711 | | 9 | 62046143 | 62050985 | Rat | n/a | Region | gene |
| 618 | 7702950 | LOC102554284 | nucleolar protein 56-like | | 9 | 73284212 | 73285074 | Rat | n/a | Region | gene |
| 617 | 7709066 | Banf1-ps3 | BAF nuclear assembly factor 1, pseudogene 3 | | 9 | 60099902 | 60100455 | Rat | n/a | Region | gene |
| 616 | 7728653 | LOC102554996 | uncharacterized LOC102554996 | | 9 | 39332222 | 39334749 | Rat | n/a | Region | gene |
| 615 | 7679868 | LOC102548321 | uncharacterized LOC102548321 | | 9 | 74712617 | 74729921 | Rat | n/a | Region | gene |
| 614 | 7680407 | Ccdc168 | coiled-coil domain containing 168 | | 9 | 46198234 | 46236325 | Rat | n/a | Region | gene |
| 613 | 9134966 | LOC103690538 | uncharacterized LOC103690538 | | 9 | 59887888 | 59901999 | Rat | n/a | Region | gene |
| 612 | 9179481 | LOC103690547 | glycine cleavage system H protein, mitochondrial pseudogene | | 9 | 56635056 | 56636545 | Rat | n/a | Region | gene |
| 611 | 9182814 | LOC103690528 | uncharacterized LOC103690528 | | 9 | 44974539 | 44981088 | Rat | n/a | Region | gene |
| 610 | 9211165 | LOC103690543 | uncharacterized LOC103690543 | | 9 | 65573691 | 65585909 | Rat | n/a | Region | gene |
| 609 | 9235481 | Fam237a | family with sequence similarity 237 member A | | 9 | 65024312 | 65035051 | Rat | n/a | Region | gene |
| 608 | 9281499 | LOC103690558 | uncharacterized LOC103690558 | | 9 | 75820056 | 75820840 | Rat | n/a | Region | gene |
| 607 | 9375952 | LOC103690545 | small integral membrane protein 7-like | | 9 | 65825361 | 65826864 | Rat | n/a | Region | gene |
| 606 | 9295055 | LOC103690525 | uncharacterized LOC103690525 | | 9 | 42934965 | 42943357 | Rat | n/a | Region | gene |
| 605 | 9346435 | LOC103690550 | uncharacterized LOC103690550 | | 9 | 49687774 | 49689862 | Rat | n/a | Region | gene |
| 604 | 11362092 | LOC108351929 | uncharacterized LOC108351929 | | 9 | 50489227 | 50559755 | Rat | n/a | Region | gene |
| 603 | 11433865 | LOC108351918 | uncharacterized LOC108351918 | | 9 | 42020176 | 42025870 | Rat | n/a | Region | gene |
| 602 | 11454381 | LOC108351943 | uncharacterized LOC108351943 | | 9 | 65225711 | 65235289 | Rat | n/a | Region | gene |
| 601 | 11468746 | LOC108352000 | glyceraldehyde-3-phosphate dehydrogenase pseudogene | | 9 | 58083349 | 58084426 | Rat | n/a | Region | gene |
| 600 | 11470012 | LOC108351952 | uncharacterized LOC108351952 | | 9 | 75079894 | 75083779 | Rat | n/a | Region | gene |
| 599 | 11470202 | LOC108351936 | 60S ribosomal protein L30-like | | 9 | 59353800 | 59354253 | Rat | n/a | Region | gene |
| 598 | 11472363 | LOC108351922 | thymosin beta-10 pseudogene | | 9 | 45544655 | 45544831 | Rat | n/a | Region | gene |
| 597 | 11474459 | LOC108352026 | high mobility group protein B1 pseudogene | | 9 | 49214819 | 49215542 | Rat | n/a | Region | gene |
| 596 | 11443911 | LOC108352023 | uncharacterized LOC108352023 | | 9 | 41304231 | 41307924 | Rat | n/a | Region | gene |
| 595 | 11444069 | Trnae-uuc5 | transfer RNA glutamic acid (anticodon UUC) 5 | | 9 | 36647874 | 36647945 | Rat | n/a | Region | gene |
| 594 | 11444870 | LOC108351925 | glyceraldehyde-3-phosphate dehydrogenase pseudogene | | 9 | 49272398 | 49273479 | Rat | n/a | Region | gene |
| 593 | 11446793 | LOC108352027 | 40S ribosomal protein S28-like | | 9 | 51515970 | 51516251 | Rat | n/a | Region | gene |
| 592 | 11451021 | Sec61gl4 | SEC61 translocon subunit gamma like 4 | | 9 | 41302673 | 41303608 | Rat | n/a | Region | gene |
| 591 | 11365277 | Tmsb10l3 | thymosin beta 10 like 3 | | 9 | 49974823 | 49975501 | Rat | n/a | Region | gene |
| 590 | 11452400 | LOC108351921 | uncharacterized LOC108351921 | | 9 | 43956886 | 44145114 | Rat | n/a | Region | gene |
| 589 | 11425109 | LOC108351947 | uncharacterized LOC108351947 | | 9 | 73869973 | 73873989 | Rat | n/a | Region | gene |
| 588 | 11356775 | LOC108351950 | uncharacterized LOC108351950 | | 9 | 74961065 | 74971838 | Rat | n/a | Region | gene |
| 587 | 11396265 | LOC108351945 | uncharacterized LOC108351945 | | 9 | 65750705 | 65758684 | Rat | n/a | Region | gene |
| 586 | 11385622 | LOC108351940 | uncharacterized LOC108351940 | | 9 | 62443442 | 62466139 | Rat | n/a | Region | gene |
| 585 | 11390134 | LOC108351933 | uncharacterized LOC108351933 | | 9 | 57071616 | 57113442 | Rat | n/a | Region | gene |
| 584 | 11391487 | LOC108351932 | uncharacterized LOC108351932 | | 9 | 56325545 | 56333506 | Rat | n/a | Region | gene |
| 583 | 11403437 | Rpl21l4 | ribosomal protein L21 like 4 | | 9 | 59821076 | 59823671 | Rat | n/a | Region | gene |
| 582 | 11382578 | LOC108352025 | uncharacterized LOC108352025 | | 9 | 44173293 | 44246711 | Rat | n/a | Region | gene |
| 581 | 11383155 | Rpl31l12 | ribosomal protein L31 like 12 | | 9 | 55833911 | 55834622 | Rat | n/a | Region | gene |
| 580 | 11476915 | LOC108351941 | dnaJ homolog subfamily A member 1 pseudogene | | 9 | 65165202 | 65166696 | Rat | n/a | Region | gene |
| 579 | 11504586 | LOC108351955 | uncharacterized LOC108351955 | | 9 | 76937295 | 76940926 | Rat | n/a | Region | gene |
| 578 | 11495887 | LOC108352024 | uncharacterized LOC108352024 | | 9 | 43587882 | 43617987 | Rat | n/a | Region | gene |
| 577 | 11489282 | LOC108352007 | 40S ribosomal protein S10 pseudogene | | 9 | 70418814 | 70419577 | Rat | n/a | Region | gene |
| 576 | 11493513 | LOC108351935 | uncharacterized LOC108351935 | | 9 | 59105339 | 59149851 | Rat | n/a | Region | gene |
| 575 | 41136363 | LOC120094917 | small nucleolar RNA SNORA17 | | 9 | 71345735 | 71345862 | Rat | n/a | Region | gene |
| 574 | 41234631 | LOC120094970 | U6 spliceosomal RNA | | 9 | 50425749 | 50425855 | Rat | n/a | Region | gene |
| 573 | 41139219 | LOC120094699 | uncharacterized LOC120094699 | | 9 | 73266508 | 73283004 | Rat | n/a | Region | gene |
| 572 | 41205098 | LOC120094876 | U7 small nuclear RNA | | 9 | 34818410 | 34818473 | Rat | n/a | Region | gene |
| 571 | 41277081 | LOC120094671 | uncharacterized LOC120094671 | | 9 | 41474137 | 41475046 | Rat | n/a | Region | gene |
| 570 | 41278460 | LOC120094801 | uncharacterized LOC120094801 | | 9 | 61394470 | 61398897 | Rat | n/a | Region | gene |
| 569 | 41114033 | LOC120094663 | uncharacterized LOC120094663 | | 9 | 36923669 | 36928337 | Rat | n/a | Region | gene |
| 568 | 41384701 | LOC120094933 | small nucleolar RNA SNORA17 | | 9 | 64436881 | 64436969 | Rat | n/a | Region | gene |
| 567 | 41090859 | LOC120094706 | uncharacterized LOC120094706 | | 9 | 74957802 | 74965568 | Rat | n/a | Region | gene |
| 566 | 41115964 | LOC120094668 | uncharacterized LOC120094668 | | 9 | 38913769 | 38918495 | Rat | n/a | Region | gene |
| 565 | 41145026 | LOC120094849 | uncharacterized LOC120094849 | | 9 | 74355208 | 74365786 | Rat | n/a | Region | gene |
| 564 | 41327220 | LOC120094983 | U6 spliceosomal RNA | | 9 | 53031962 | 53032064 | Rat | n/a | Region | gene |
| 563 | 41360059 | LOC120094669 | uncharacterized LOC120094669 | | 9 | 39697669 | 39727620 | Rat | n/a | Region | gene |
| 562 | 41092498 | LOC120094902 | small nucleolar RNA SNORA48 | | 9 | 72154158 | 72154301 | Rat | n/a | Region | gene |
| 561 | 41117169 | LOC120094931 | small nucleolar RNA SNORA17 | | 9 | 33539517 | 33539639 | Rat | n/a | Region | gene |
| 560 | 41174017 | Asdurf | ASNSD1 upstream open reading frame | | 9 | 48126808 | 48136134 | Rat | n/a | Region | gene |
| 559 | 41260367 | LOC120094689 | uncharacterized LOC120094689 | | 9 | 59349203 | 59351098 | Rat | n/a | Region | gene |
| 558 | 41361104 | LOC120094670 | uncharacterized LOC120094670 | | 9 | 41398217 | 41414897 | Rat | n/a | Region | gene |
| 557 | 41388092 | Rps18-ps7 | ribosomal protein S18, pseudogene 7 | | 9 | 36047178 | 36048807 | Rat | n/a | Region | gene |
| 556 | 41388248 | LOC120094910 | small nucleolar RNA SNORA17 | | 9 | 68381516 | 68381647 | Rat | n/a | Region | gene |
| 555 | 41093670 | LOC120094674 | uncharacterized LOC120094674 | | 9 | 42111835 | 42117297 | Rat | n/a | Region | gene |
| 554 | 41147243 | Mrpl30-ps7 | mitochondrial ribosomal protein L30, pseudogene 7 | | 9 | 46039259 | 46045901 | Rat | n/a | Region | gene |
| 553 | 41261015 | LOC120094798 | uncharacterized LOC120094798 | | 9 | 60905201 | 60907409 | Rat | n/a | Region | gene |
| 552 | 41330207 | LOC120094704 | uncharacterized LOC120094704 | | 9 | 74529463 | 74549684 | Rat | n/a | Region | gene |
| 551 | 41364019 | LOC120094895 | small nucleolar RNA SNORA51 | | 9 | 62093950 | 62094058 | Rat | n/a | Region | gene |
| 550 | 41094824 | LOC120094693 | uncharacterized LOC120094693 | | 9 | 65592173 | 65596677 | Rat | n/a | Region | gene |
| 549 | 41096022 | LOC120094690 | uncharacterized LOC120094690 | | 9 | 59655080 | 59658278 | Rat | n/a | Region | gene |
| 548 | 41096174 | LOC120094665 | uncharacterized LOC120094665 | | 9 | 38130573 | 38137099 | Rat | n/a | Region | gene |
| 547 | 41096178 | Rps7-ps13 | ribosomal protein S7, pseudogene 13 | | 9 | 50871906 | 50872667 | Rat | n/a | Region | gene |
| 546 | 41119832 | LOC120094916 | U1 spliceosomal RNA | | 9 | 37075112 | 37075272 | Rat | n/a | Region | gene |
| 545 | 41148168 | Snora41 | small nucleolar RNA, H/ACA box 41 | | 9 | 64582070 | 64582201 | Rat | n/a | Region | gene |
| 544 | 41176457 | LOC120094945 | U6atac minor spliceosomal RNA | | 9 | 69865987 | 69866117 | Rat | n/a | Region | gene |
| 543 | 41332032 | LOC120094976 | U6 spliceosomal RNA | | 9 | 46060656 | 46060762 | Rat | n/a | Region | gene |
| 542 | 41178156 | LOC120094869 | U6 spliceosomal RNA | | 9 | 33912595 | 33912698 | Rat | n/a | Region | gene |
| 541 | 41189416 | LOC120094799 | uncharacterized LOC120094799 | | 9 | 60919282 | 60922015 | Rat | n/a | Region | gene |
| 540 | 41098019 | LOC120094921 | small nucleolar RNA SNORA17 | | 9 | 41921340 | 41921468 | Rat | n/a | Region | gene |
| 539 | 41122244 | LOC120094911 | small nucleolar RNA SNORA17 | | 9 | 60509054 | 60509188 | Rat | n/a | Region | gene |
| 538 | 41123000 | LOC120094847 | uncharacterized LOC120094847 | | 9 | 53988400 | 53993546 | Rat | n/a | Region | gene |
| 537 | 41154104 | Rcbtb1-ps1 | RCC1 and BTB domain containing protein 1, pseudogene 1 | | 9 | 36776133 | 36790749 | Rat | n/a | Region | gene |
| 536 | 41180480 | LOC120094929 | small nucleolar RNA SNORA17 | | 9 | 52090288 | 52090429 | Rat | n/a | Region | gene |
| 535 | 41190690 | LOC120094844 | uncharacterized LOC120094844 | | 9 | 38031194 | 38033635 | Rat | n/a | Region | gene |
| 534 | 41266346 | LOC120094714 | uncharacterized LOC120094714 | | 9 | 76946232 | 76947900 | Rat | n/a | Region | gene |
| 533 | 41344301 | Trnav-aac15 | transfer RNA valine (anticodon AAC) 15 | | 9 | 60415378 | 60415450 | Rat | n/a | Region | gene |
| 532 | 41395376 | Trnap-agg59 | transfer RNA proline (anticodon AGG) 59 | | 9 | 76067772 | 76067852 | Rat | n/a | Region | gene |
| 531 | 41288307 | LOC120094676 | uncharacterized LOC120094676 | | 9 | 43117096 | 43119324 | Rat | n/a | Region | gene |
| 530 | 41102125 | Rps21-ps7 | ribosomal protein S21, pseudogene 7 | | 9 | 75640472 | 75640715 | Rat | n/a | Region | gene |
| 529 | 41125672 | LOC120094794 | uncharacterized LOC120094794 | | 9 | 56908502 | 56915395 | Rat | n/a | Region | gene |
| 528 | 41218150 | LOC120094956 | U2 spliceosomal RNA | | 9 | 73856773 | 73856963 | Rat | n/a | Region | gene |
| 527 | 41290364 | LOC120094862 | U6 spliceosomal RNA | | 9 | 37962141 | 37962247 | Rat | n/a | Region | gene |
| 526 | 41346670 | LOC120094661 | thymosin beta-10-like | | 9 | 36837361 | 36852737 | Rat | n/a | Region | gene |
| 525 | 41128029 | LOC120094972 | U6 spliceosomal RNA | | 9 | 46880232 | 46880338 | Rat | n/a | Region | gene |
| 524 | 41159026 | LOC120094960 | U2 spliceosomal RNA | | 9 | 73465051 | 73465140 | Rat | n/a | Region | gene |
| 523 | 41185075 | LOC120094796 | uncharacterized LOC120094796 | | 9 | 60343808 | 60368188 | Rat | n/a | Region | gene |
| 522 | 41400105 | LOC120094804 | uncharacterized LOC120094804 | | 9 | 69984418 | 69994916 | Rat | n/a | Region | gene |
| 521 | 41128145 | Snord11b | small nucleolar RNA, C/D box 11B | | 9 | 61137168 | 61137247 | Rat | n/a | Region | gene |
| 520 | 41160946 | Snord70 | small nucleolar RNA, C/D box 70 | | 9 | 61125974 | 61126060 | Rat | n/a | Region | gene |
| 519 | 41107238 | LOC120094913 | small nucleolar RNA SNORA17 | | 9 | 37335150 | 37335272 | Rat | n/a | Region | gene |
| 518 | 41130776 | Rnf149-ps2 | ring finger protein 149, pseudogene 2 | | 9 | 41829062 | 41830546 | Rat | n/a | Region | gene |
| 517 | 41163881 | LOC120094904 | small nucleolar RNA SNORA48 | | 9 | 40922766 | 40922908 | Rat | n/a | Region | gene |
| 516 | 41272762 | LOC120094675 | uncharacterized LOC120094675 | | 9 | 42466670 | 42468248 | Rat | n/a | Region | gene |
| 515 | 41294134 | LOC120094954 | U2 spliceosomal RNA | | 9 | 73874253 | 73874443 | Rat | n/a | Region | gene |
| 514 | 41294387 | LOC120094695 | uncharacterized LOC120094695 | | 9 | 66061878 | 66071873 | Rat | n/a | Region | gene |
| 513 | 41107517 | LOC120094903 | small nucleolar RNA SNORA48 | | 9 | 50321577 | 50321728 | Rat | n/a | Region | gene |
| 512 | 41273883 | LOC120094688 | uncharacterized LOC120094688 | | 9 | 58898108 | 58899892 | Rat | n/a | Region | gene |
| 511 | 41274183 | LOC120094703 | uncharacterized LOC120094703 | | 9 | 74289128 | 74292893 | Rat | n/a | Region | gene |
| 510 | 41296899 | Trnap-agg73 | transfer RNA proline (anticodon AGG) 73 | | 9 | 66529537 | 66529617 | Rat | n/a | Region | gene |
| 509 | 41352736 | LOC120094958 | U2 spliceosomal RNA | | 9 | 59986296 | 59986483 | Rat | n/a | Region | gene |
| 508 | 41377830 | LOC120094880 | U7 small nuclear RNA | | 9 | 58422514 | 58422570 | Rat | n/a | Region | gene |
| 507 | 40944792 | Hnrnpa1-ps34 | heterogeneous nuclear ribonucleoprotein A1, pseudogene 34 | | 9 | 45246306 | 45247422 | Rat | n/a | Region | gene |
| 506 | 40944823 | LOC120094955 | U2 spliceosomal RNA | | 9 | 73889838 | 73890028 | Rat | n/a | Region | gene |
| 505 | 40998509 | LOC120094713 | uncharacterized LOC120094713 | | 9 | 76902456 | 76921926 | Rat | n/a | Region | gene |
| 504 | 41015968 | LOC120094683 | uncharacterized LOC120094683 | | 9 | 50172839 | 50187261 | Rat | n/a | Region | gene |
| 503 | 40950643 | LOC120094708 | uncharacterized LOC120094708 | | 9 | 75193491 | 75225446 | Rat | n/a | Region | gene |
| 502 | 40952034 | LOC120094967 | U4 spliceosomal RNA | | 9 | 67035468 | 67035644 | Rat | n/a | Region | gene |
| 501 | 40976196 | LOC120094959 | U2 spliceosomal RNA | | 9 | 52574954 | 52575147 | Rat | n/a | Region | gene |
| 500 | 41012662 | LOC120094705 | uncharacterized LOC120094705 | | 9 | 74729964 | 74742441 | Rat | n/a | Region | gene |
| 499 | 41013560 | LOC120094932 | small nucleolar RNA SNORA17 | | 9 | 59701502 | 59701601 | Rat | n/a | Region | gene |
| 498 | 40979013 | LOC120094797 | mitochondrial intermembrane space import and assembly protein 40-like | | 9 | 60584841 | 60585260 | Rat | n/a | Region | gene |
| 497 | 40982266 | Ube2i-ps5 | ubiquitin-conjugating enzyme E2I, pseudogene 5 | | 9 | 35982390 | 35984367 | Rat | n/a | Region | gene |
| 496 | 40983058 | LOC120094715 | uncharacterized LOC120094715 | | 9 | 77119878 | 77144297 | Rat | n/a | Region | gene |
| 495 | 40983397 | LOC120094901 | small nucleolar RNA SNORA48 | | 9 | 75310800 | 75310942 | Rat | n/a | Region | gene |
| 494 | 41003253 | LOC120094677 | uncharacterized LOC120094677 | | 9 | 44521425 | 44577442 | Rat | n/a | Region | gene |
| 493 | 40959969 | LOC120094803 | Kruppel like factor 7 | | 9 | 65433683 | 65526372 | Rat | n/a | Region | gene |
| 492 | 40960633 | Snord51 | small nucleolar RNA, C/D box 51 | | 9 | 64581731 | 64581808 | Rat | n/a | Region | gene |
| 491 | 41004670 | Snord11 | small nucleolar RNA, C/D box 11 | | 9 | 61137715 | 61137798 | Rat | n/a | Region | gene |
| 490 | 41006317 | LOC120094678 | uncharacterized LOC120094678 | | 9 | 44599194 | 44629263 | Rat | n/a | Region | gene |
| 489 | 40935687 | Trnat-agu33 | transfer RNA threonine (anticodon AGU) 33 | | 9 | 40432345 | 40432425 | Rat | n/a | Region | gene |
| 488 | 40935986 | LOC120094700 | uncharacterized LOC120094700 | | 9 | 73528981 | 73537576 | Rat | n/a | Region | gene |
| 487 | 40961944 | Snord70b | small nucleolar RNA, C/D box 70B | | 9 | 61126745 | 61126828 | Rat | n/a | Region | gene |
| 486 | 40985578 | Trnav-aac39 | transfer RNA valine (anticodon AAC) 39 | | 9 | 76099241 | 76099313 | Rat | n/a | Region | gene |
| 485 | 40939110 | LOC120094918 | small nucleolar RNA SNORA17 | | 9 | 68756815 | 68756940 | Rat | n/a | Region | gene |
| 484 | 41009382 | Got2-ps1 | glutamic-oxaloacetic transaminase 2, pseudogene 1 | | 9 | 71773494 | 71780853 | Rat | n/a | Region | gene |
| 483 | 40942445 | LOC120094712 | uncharacterized LOC120094712 | | 9 | 76745609 | 76750739 | Rat | n/a | Region | gene |
| 482 | 40943289 | LOC120094696 | uncharacterized LOC120094696 | | 9 | 66300223 | 66302108 | Rat | n/a | Region | gene |
| 481 | 40971008 | LOC120094685 | uncharacterized LOC120094685 | | 9 | 54842275 | 54876577 | Rat | n/a | Region | gene |
| 480 | 41242467 | LOC120094697 | uncharacterized LOC120094697 | | 9 | 70644316 | 70744273 | Rat | n/a | Region | gene |
| 479 | 41242603 | LOC120094662 | uncharacterized LOC120094662 | | 9 | 37037463 | 37047132 | Rat | n/a | Region | gene |
| 478 | 41312543 | Trnaa-agc41 | transfer RNA alanine (anticodon AGC) 41 | | 9 | 39301657 | 39301729 | Rat | n/a | Region | gene |
| 477 | 41024403 | LOC120094664 | uncharacterized LOC120094664 | | 9 | 38121368 | 38165876 | Rat | n/a | Region | gene |
| 476 | 41313489 | LOC120094912 | small nucleolar RNA SNORA17 | | 9 | 58995078 | 58995205 | Rat | n/a | Region | gene |
| 475 | 41049662 | LOC120094686 | uncharacterized LOC120094686 | | 9 | 55337934 | 55363100 | Rat | n/a | Region | gene |
| 474 | 41076818 | LOC120094795 | uncharacterized LOC120094795 | | 9 | 60451591 | 60485960 | Rat | n/a | Region | gene |
| 473 | 41315872 | LOC120094878 | U7 small nuclear RNA | | 9 | 68366211 | 68366273 | Rat | n/a | Region | gene |
| 472 | 41027314 | LOC120094698 | uncharacterized LOC120094698 | | 9 | 72620955 | 72634535 | Rat | n/a | Region | gene |
| 471 | 41052886 | LOC120094872 | U6 spliceosomal RNA | | 9 | 59544343 | 59544444 | Rat | n/a | Region | gene |
| 470 | 41333059 | LOC120094922 | small nucleolar RNA SNORA17 | | 9 | 37335526 | 37335650 | Rat | n/a | Region | gene |
| 469 | 41053977 | LOC120094930 | small nucleolar RNA SNORA17 | | 9 | 45127812 | 45127930 | Rat | n/a | Region | gene |
| 468 | 41220839 | LOC120094964 | U2 spliceosomal RNA | | 9 | 47572833 | 47572962 | Rat | n/a | Region | gene |
| 467 | 41058289 | LOC120094899 | small nucleolar RNA SNORA48 | | 9 | 61124277 | 61124421 | Rat | n/a | Region | gene |
| 466 | 41298570 | LOC120094923 | small nucleolar RNA SNORA17 | | 9 | 48391955 | 48392087 | Rat | n/a | Region | gene |
| 465 | 41314403 | Cks2-ps4 | CDC28 protein kinase regulatory subunit 2, pseudogene 4 | | 9 | 74127636 | 74133481 | Rat | n/a | Region | gene |
| 464 | 41300716 | LOC120094969 | U4 spliceosomal RNA | | 9 | 50317788 | 50317913 | Rat | n/a | Region | gene |
| 463 | 41034877 | Ptp4a1-ps5 | protein tyrosine phosphatase 4A1, pseudogene 5 | | 9 | 59736180 | 59736701 | Rat | n/a | Region | gene |
| 462 | 41062037 | LOC120094908 | small nucleolar RNA SNORA48 | | 9 | 33647489 | 33647629 | Rat | n/a | Region | gene |
| 461 | 41335151 | Atp5mc2-ps1 | ATP synthase membrane subunit c locus 2, pseudogene 1 | | 9 | 61746260 | 61746688 | Rat | n/a | Region | gene |
| 460 | 41036328 | LOC120094966 | U4 spliceosomal RNA | | 9 | 38982359 | 38982474 | Rat | n/a | Region | gene |
| 459 | 41016240 | Snord89 | small nucleolar RNA, C/D box 89 | | 9 | 41827972 | 41828086 | Rat | n/a | Region | gene |
| 458 | 41038988 | LOC120094971 | U6 spliceosomal RNA | | 9 | 41123228 | 41123334 | Rat | n/a | Region | gene |
| 457 | 41065030 | LOC120094660 | uncharacterized LOC120094660 | | 9 | 36646954 | 36649913 | Rat | n/a | Region | gene |
| 456 | 41065706 | LOC120094957 | U2 spliceosomal RNA | | 9 | 73894013 | 73894203 | Rat | n/a | Region | gene |
| 455 | 41235983 | LOC120094692 | uncharacterized LOC120094692 | | 9 | 62143467 | 62149952 | Rat | n/a | Region | gene |
| 454 | 41019548 | LOC120094961 | U2 spliceosomal RNA | | 9 | 45587224 | 45587387 | Rat | n/a | Region | gene |
| 453 | 41020349 | Dnajb13-ps1 | DnaJ heat shock protein family (Hsp40) member B13, pseudogene 1 | | 9 | 74800725 | 74801412 | Rat | n/a | Region | gene |
| 452 | 41240104 | LOC120094963 | U2 spliceosomal RNA | | 9 | 39932292 | 39932472 | Rat | n/a | Region | gene |
| 451 | 41074009 | Trnaa-agc29 | transfer RNA alanine (anticodon AGC) 29 | | 9 | 50109825 | 50109905 | Rat | n/a | Region | gene |