| 1000 | 3651 | Cxcl12 | C-X-C motif chemokine ligand 12 | | 4 | 150388326 | 150401173 | Rat | n/a | Region | gene |
| 999 | 3552 | Reg1a | regenerating family member 1 alpha | | 4 | 110892451 | 110895115 | Rat | n/a | Region | gene |
| 998 | 3573 | Rho | rhodopsin | | 4 | 148975597 | 148988693 | Rat | n/a | Region | gene |
| 997 | 3594 | Rpn1 | ribophorin I | | 4 | 120543667 | 120565069 | Rat | n/a | Region | gene |
| 996 | 3960 | Vhl | von Hippel-Lindau tumor suppressor | | 4 | 146772483 | 146779376 | Rat | n/a | Region | gene |
| 995 | 71067 | Gpr27 | G protein-coupled receptor 27 | | 4 | 132328364 | 132329497 | Rat | n/a | Region | gene |
| 994 | 3253 | Cntn3 | contactin 3 | | 4 | 134841268 | 135214460 | Rat | n/a | Region | gene |
| 993 | 3256 | Reg3g | regenerating family member 3 gamma | | 4 | 110922805 | 110927803 | Rat | n/a | Region | gene |
| 992 | 2797 | Hk2 | hexokinase 2 | | 4 | 115234509 | 115283530 | Rat | n/a | Region | gene |
| 991 | 3903 | Trh | thyrotropin releasing hormone | | 4 | 124742111 | 124777094 | Rat | n/a | Region | gene |
| 990 | 61978 | Klrg1 | killer cell lectin like receptor G1 | | 4 | 155455465 | 155467301 | Rat | n/a | Region | gene |
| 989 | 70918 | Klf15 | KLF transcription factor 15 | | 4 | 122965718 | 122978403 | Rat | n/a | Region | gene |
| 988 | 70938 | Il5ra | interleukin 5 receptor subunit alpha | | 4 | 139630652 | 139664593 | Rat | n/a | Region | gene |
| 987 | 70998 | Fxyd4 | FXYD domain-containing ion transport regulator 4 | | 4 | 151109779 | 151113659 | Rat | n/a | Region | gene |
| 986 | 69339 | Nup210 | nucleoporin 210 | | 4 | 123511558 | 123609874 | Rat | n/a | Region | gene |
| 985 | 2096 | Alox5 | arachidonate 5-lipoxygenase | | 4 | 149531329 | 149578696 | Rat | n/a | Region | gene |
| 984 | 2830 | Hrh1 | histamine receptor H 1 | | 4 | 147564963 | 147649353 | Rat | n/a | Region | gene |
| 983 | 3092 | Mitf | melanocyte inducing transcription factor | | 4 | 130409020 | 130621145 | Rat | n/a | Region | gene |
| 982 | 3371 | Pparg | peroxisome proliferator-activated receptor gamma | | 4 | 148423102 | 148548471 | Rat | n/a | Region | gene |
| 981 | 2664 | Gata2 | GATA binding protein 2 | | 4 | 120654205 | 120667763 | Rat | n/a | Region | gene |
| 980 | 69079 | Wnt7a | Wnt family member 7A | | 4 | 123863108 | 123908981 | Rat | n/a | Region | gene |
| 979 | 2933 | Itpr1 | inositol 1,4,5-trisphosphate receptor, type 1 | | 4 | 141187377 | 141554240 | Rat | n/a | Region | gene |
| 978 | 2245 | Cacna1c | calcium voltage-gated channel subunit alpha1 C | | 4 | 151764138 | 152379454 | Rat | n/a | Region | gene |
| 977 | 2281 | Cav3 | caveolin 3 | | 4 | 145582168 | 145598142 | Rat | n/a | Region | gene |
| 976 | 68439 | Bhlhe40 | basic helix-loop-helix family, member e40 | | 4 | 141618453 | 141624154 | Rat | n/a | Region | gene |
| 975 | 2176 | Atp2b2 | ATPase plasma membrane Ca2+ transporting 2 | | 4 | 146894602 | 147208060 | Rat | n/a | Region | gene |
| 974 | 2042 | Add2 | adducin 2 | | 4 | 118444594 | 118538505 | Rat | n/a | Region | gene |
| 973 | 3239 | Oxtr | oxytocin receptor | | 4 | 145598549 | 145614674 | Rat | n/a | Region | gene |
| 972 | 628850 | Wnt5b | Wnt family member 5B | | 4 | 152609566 | 152733790 | Rat | n/a | Region | gene |
| 971 | 621062 | Clec4f | C-type lectin domain family 4, member F | | 4 | 116129023 | 116138744 | Rat | n/a | Region | gene |
| 970 | 620280 | Prok2 | prokineticin 2 | | 4 | 132346681 | 132361754 | Rat | n/a | Region | gene |
| 969 | 708443 | Prokr1 | prokineticin receptor 1 | | 4 | 120022301 | 120033367 | Rat | n/a | Region | gene |
| 968 | 621133 | Vax2 | ventral anterior homeobox 2 | | 4 | 116195528 | 116219597 | Rat | n/a | Region | gene |
| 967 | 629473 | Camk1 | calcium/calmodulin-dependent protein kinase I | | 4 | 146481196 | 146492039 | Rat | n/a | Region | gene |
| 966 | 632283 | Ghrl | ghrelin and obestatin prepropeptide | | 4 | 146865712 | 146869621 | Rat | n/a | Region | gene |
| 965 | 71039 | Mgll | monoglyceride lipase | | 4 | 121192186 | 121294187 | Rat | n/a | Region | gene |
| 964 | 621168 | Ogg1 | 8-oxoguanine DNA glycosylase | | 4 | 146474701 | 146481959 | Rat | n/a | Region | gene |
| 963 | 620480 | Cand2 | cullin-associated and neddylation-dissociated 2 (putative) | | 4 | 148835050 | 148864039 | Rat | n/a | Region | gene |
| 962 | 621294 | Aldh1l1 | aldehyde dehydrogenase 1 family, member L1 | | 4 | 123059989 | 123106471 | Rat | n/a | Region | gene |
| 961 | 621668 | Grip2 | glutamate receptor interacting protein 2 | | 4 | 124271456 | 124356538 | Rat | n/a | Region | gene |
| 960 | 3811 | Tacr1 | tachykinin receptor 1 | | 4 | 114920844 | 115089733 | Rat | n/a | Region | gene |
| 959 | 708509 | Vom1r90 | vomeronasal 1 receptor 90 | | 4 | 122139053 | 122148056 | Rat | n/a | Region | gene |
| 958 | 628685 | Fbln2 | fibulin 2 | | 4 | 123704289 | 123763857 | Rat | n/a | Region | gene |
| 957 | 620229 | Zfp422 | zinc finger protein 422 | | 4 | 149885805 | 149893287 | Rat | n/a | Region | gene |
| 956 | 628707 | Zfand4 | zinc finger AN1-type containing 4 | | 4 | 149327339 | 149399495 | Rat | n/a | Region | gene |
| 955 | 68321 | Sec61a1 | SEC61 translocon subunit alpha 1 | | 4 | 120973519 | 120987871 | Rat | n/a | Region | gene |
| 954 | 620160 | Bid | BH3 interacting domain death agonist | | 4 | 154113198 | 154136353 | Rat | n/a | Region | gene |
| 953 | 620172 | Frmd4b | FERM domain containing 4B | | 4 | 129895401 | 130222070 | Rat | n/a | Region | gene |
| 952 | 620551 | Tmf1 | TATA element modulatory factor 1 | | 4 | 129759952 | 129785705 | Rat | n/a | Region | gene |
| 951 | 620552 | Ninj2 | ninjurin 2 | | 4 | 153306439 | 153408618 | Rat | n/a | Region | gene |
| 950 | 727874 | Rtkn | rhotekin | | 4 | 115640813 | 115657952 | Rat | n/a | Region | gene |
| 949 | 621605 | Nat8b | N-acetyltransferase 8B | | 4 | 118359445 | 118364351 | Rat | n/a | Region | gene |
| 948 | 708572 | Arl6ip5 | ADP-ribosylation factor like GTPase 6 interacting protein 5 | | 4 | 129810650 | 129838628 | Rat | n/a | Region | gene |
| 947 | 621361 | Cntn4 | contactin 4 | | 4 | 138624584 | 139622499 | Rat | n/a | Region | gene |
| 946 | 621366 | Mug1 | murinoglobulin 1 | | 4 | 155076270 | 155130051 | Rat | n/a | Region | gene |
| 945 | 620533 | Slc6a1 | solute carrier family 6 member 1 | | 4 | 147448961 | 147482295 | Rat | n/a | Region | gene |
| 944 | 2546 | Egr4 | early growth response 4 | | 4 | 118047869 | 118050328 | Rat | n/a | Region | gene |
| 943 | 628733 | Erc1 | ELKS/RAB6-interacting/CAST family member 1 | | 4 | 152763664 | 153055724 | Rat | n/a | Region | gene |
| 942 | 628737 | Slc6a11 | solute carrier family 6 member 11 | | 4 | 147297972 | 147413319 | Rat | n/a | Region | gene |
| 941 | 3531 | Raf1 | Raf-1 proto-oncogene, serine/threonine kinase | | 4 | 148679534 | 148740265 | Rat | n/a | Region | gene |
| 940 | 621203 | Rpl32 | ribosomal protein L32 | | 4 | 148864048 | 148867612 | Rat | n/a | Region | gene |
| 939 | 631379 | Cyp26b1 | cytochrome P450, family 26, subfamily b, polypeptide 1 | | 4 | 117041808 | 117058628 | Rat | n/a | Region | gene |
| 938 | 68373 | Ruvbl1 | RuvB-like AAA ATPase 1 | | 4 | 120932486 | 120967400 | Rat | n/a | Region | gene |
| 937 | 621609 | Nat8 | N-acetyltransferase 8 | | 4 | 118279521 | 118284671 | Rat | n/a | Region | gene |
| 936 | 621084 | Uba3 | ubiquitin-like modifier activating enzyme 3 | | 4 | 129789526 | 129810707 | Rat | n/a | Region | gene |
| 935 | 620788 | Slc6a13 | solute carrier family 6 member 13 | | 4 | 154539246 | 154577784 | Rat | n/a | Region | gene |
| 934 | 619857 | Grm7 | glutamate metabotropic receptor 7 | | 4 | 143730862 | 144613230 | Rat | n/a | Region | gene |
| 933 | 621607 | Nat8f3 | N-acetyltransferase 8 (GCN5-related) family member 3 | | 4 | 118241792 | 118246010 | Rat | n/a | Region | gene |
| 932 | 735014 | Gkn1 | gastrokine 1 | | 4 | 119790101 | 119795389 | Rat | n/a | Region | gene |
| 931 | 1304825 | Fam136a | family with sequence similarity 136, member A | | 4 | 118805129 | 118811046 | Rat | n/a | Region | gene |
| 930 | 620366 | Hnrnpf | heterogeneous nuclear ribonucleoprotein F | | 4 | 151083262 | 151104464 | Rat | n/a | Region | gene |
| 929 | 621171 | Anxa4 | annexin A4 | | 4 | 119184378 | 119241183 | Rat | n/a | Region | gene |
| 928 | 708391 | Vom1r97 | vomeronasal 1 receptor 97 | | 4 | 122361863 | 122364034 | Rat | n/a | Region | gene |
| 927 | 620255 | Slc6a12 | solute carrier family 6 member 12 | | 4 | 154585386 | 154603750 | Rat | n/a | Region | gene |
| 926 | 628706 | Sfxn5 | sideroflexin 5 | | 4 | 117750213 | 117869826 | Rat | n/a | Region | gene |
| 925 | 1304817 | Atg7 | autophagy related 7 | | 4 | 147718663 | 147925656 | Rat | n/a | Region | gene |
| 924 | 2133 | Apobec1 | apolipoprotein B mRNA editing enzyme catalytic subunit 1 | | 4 | 155800030 | 155828515 | Rat | n/a | Region | gene |
| 923 | 1304561 | Chchd6 | coiled-coil-helix-coiled-coil-helix domain containing 6 | | 4 | 121803501 | 122024209 | Rat | n/a | Region | gene |
| 922 | 1302962 | Mug2 | murinoglobulin 2 | | 4 | 155164061 | 155236894 | Rat | n/a | Region | gene |
| 921 | 708384 | Vom1r102 | vomeronasal 1 receptor 102 | | 4 | 122537934 | 122545602 | Rat | n/a | Region | gene |
| 920 | 708395 | Vom1r101 | vomeronasal 1 receptor 101 | | 4 | 122499102 | 122500235 | Rat | n/a | Region | gene |
| 919 | 2004 | A2m | alpha-2-macroglobulin | | 4 | 154897770 | 154947787 | Rat | n/a | Region | gene |
| 918 | 61912 | Slc6a6 | solute carrier family 6 member 6 | | 4 | 124195186 | 124268880 | Rat | n/a | Region | gene |
| 917 | 1303009 | Slc4a5 | solute carrier family 4 member 5 | | 4 | 115710101 | 115810330 | Rat | n/a | Region | gene |
| 916 | 620858 | Tpra1 | transmembrane protein adipocyte associated 1 | | 4 | 121364093 | 121375275 | Rat | n/a | Region | gene |
| 915 | 3201 | Nr2c2 | nuclear receptor subfamily 2, group C, member 2 | | 4 | 124610216 | 124666813 | Rat | n/a | Region | gene |
| 914 | 621141 | Wnk1 | WNK lysine deficient protein kinase 1 | | 4 | 153128334 | 153253905 | Rat | n/a | Region | gene |
| 913 | 62008 | Cntn6 | contactin 6 | | 4 | 137354886 | 137751712 | Rat | n/a | Region | gene |
| 912 | 621606 | Nat8f1 | N-acetyltransferase 8 (GCN5-related) family member 1 | | 4 | 118336208 | 118342923 | Rat | n/a | Region | gene |
| 911 | 621401 | Reg3a | regenerating islet-derived 3 alpha | | 4 | 110872398 | 110875157 | Rat | n/a | Region | gene |
| 910 | 69240 | Mogs | mannosyl-oligosaccharide glucosidase | | 4 | 115621623 | 115625026 | Rat | n/a | Region | gene |
| 909 | 621610 | Nat8f5 | N-acetyltransferase 8 (GCN5-related) family member 5 | | 4 | 118260323 | 118285038 | Rat | n/a | Region | gene |
| 908 | 3798 | Syn2 | synapsin II | | 4 | 148178846 | 148347010 | Rat | n/a | Region | gene |
| 907 | 3849 | Tgfa | transforming growth factor alpha | | 4 | 118618043 | 118700897 | Rat | n/a | Region | gene |
| 906 | 61908 | Rab7a | RAB7A, member RAS oncogene family | | 4 | 120461966 | 120510756 | Rat | n/a | Region | gene |
| 905 | 628652 | Pcyox1 | prenylcysteine oxidase 1 | | 4 | 118832114 | 118842951 | Rat | n/a | Region | gene |
| 904 | 735230 | Washc2c | WASH complex subunit 2C | | 4 | 149267851 | 149325850 | Rat | n/a | Region | gene |
| 903 | 620122 | Chl1 | cell adhesion molecule L1-like | | 4 | 136291504 | 136505830 | Rat | n/a | Region | gene |
| 902 | 621807 | Cnbp | CCHC-type zinc finger, nucleic acid binding protein | | 4 | 120302768 | 120311694 | Rat | n/a | Region | gene |
| 901 | 1304842 | Mtmr14 | myotubularin related protein 14 | | 4 | 146386949 | 146429990 | Rat | n/a | Region | gene |
| 900 | 62038 | Dctn1 | dynactin subunit 1 | | 4 | 115671024 | 115703824 | Rat | n/a | Region | gene |
| 899 | 1305008 | Suclg2 | succinate-CoA ligase GDP-forming subunit beta | | 4 | 128067031 | 128337146 | Rat | n/a | Region | gene |
| 898 | 1306723 | Prickle2 | prickle planar cell polarity protein 2 | | 4 | 124869655 | 125214862 | Rat | n/a | Region | gene |
| 897 | 1305577 | Mcm2 | minichromosome maintenance complex component 2 | | 4 | 121346434 | 121360962 | Rat | n/a | Region | gene |
| 896 | 1305851 | Tex261 | testis expressed 261 | | 4 | 116253547 | 116260730 | Rat | n/a | Region | gene |
| 895 | 1304792 | Gcfc2 | GC-rich sequence DNA-binding factor 2 | | 4 | 114481613 | 114519268 | Rat | n/a | Region | gene |
| 894 | 1304799 | Dguok | deoxyguanosine kinase | | 4 | 115987101 | 116014733 | Rat | n/a | Region | gene |
| 893 | 1305589 | Fgd5 | FYVE, RhoGEF and PH domain containing 5 | | 4 | 124497061 | 124594564 | Rat | n/a | Region | gene |
| 892 | 1307014 | Mob1a | MOB kinase activator 1A | | 4 | 115831581 | 115848561 | Rat | n/a | Region | gene |
| 891 | 1306392 | Il17rc | interleukin 17 receptor C | | 4 | 146618321 | 146631444 | Rat | n/a | Region | gene |
| 890 | 1305742 | Tia1 | TIA1 cytotoxic granule-associated RNA binding protein | | 4 | 118852765 | 118883252 | Rat | n/a | Region | gene |
| 889 | 1305815 | Podxl2 | podocalyxin-like 2 | | 4 | 121306224 | 121338070 | Rat | n/a | Region | gene |
| 888 | 1307077 | Rybp | RING1 and YY1 binding protein | | 4 | 132876260 | 132928328 | Rat | n/a | Region | gene |
| 887 | 1305760 | Xpc | XPC complex subunit, DNA damage recognition and repair factor | | 4 | 123993670 | 124020922 | Rat | n/a | Region | gene |
| 886 | 1306746 | C4h2orf42 | similar to human chromosome 2 open reading frame 42 | | 4 | 118887688 | 118916808 | Rat | n/a | Region | gene |
| 885 | 1307312 | Ppp4r2 | protein phosphatase 4, regulatory subunit 2 | | 4 | 133454555 | 133495486 | Rat | n/a | Region | gene |
| 884 | 1306985 | Bcl2l13 | Bcl2-like 13 | | 4 | 154056116 | 154112890 | Rat | n/a | Region | gene |
| 883 | 1306993 | Rad18 | RAD18 E3 ubiquitin protein ligase | | 4 | 145735654 | 145821102 | Rat | n/a | Region | gene |
| 882 | 1307582 | Rpusd3 | RNA pseudouridine synthase D3 | | 4 | 146553743 | 146562789 | Rat | n/a | Region | gene |
| 881 | 1306422 | Cct7 | chaperonin containing TCP1 subunit 7 | | 4 | 117989232 | 118006478 | Rat | n/a | Region | gene |
| 880 | 1309939 | Sumf1 | sulfatase modifying factor 1 | | 4 | 141078735 | 141160711 | Rat | n/a | Region | gene |
| 879 | 1308857 | Trnt1 | tRNA nucleotidyl transferase 1 | | 4 | 139681115 | 139703611 | Rat | n/a | Region | gene |
| 878 | 1305057 | Nagk | N-acetylglucosamine kinase | | 4 | 116281179 | 116293870 | Rat | n/a | Region | gene |
| 877 | 1307688 | Isy1 | ISY1 splicing factor homolog | | 4 | 120276535 | 120297227 | Rat | n/a | Region | gene |
| 876 | 1306557 | Hdhd5 | haloacid dehalogenase like hydrolase domain containing 5 | | 4 | 153701026 | 153753303 | Rat | n/a | Region | gene |
| 875 | 1306559 | Il17ra | interleukin 17 receptor A | | 4 | 153667534 | 153690174 | Rat | n/a | Region | gene |
| 874 | 1304961 | Wbp1 | WW domain binding protein 1 | | 4 | 115625168 | 115627567 | Rat | n/a | Region | gene |
| 873 | 1310610 | Shq1 | SHQ1, H/ACA ribonucleoprotein assembly factor | | 4 | 133213357 | 133305586 | Rat | n/a | Region | gene |
| 872 | 3753 | Spr | sepiapterin reductase | | 4 | 117671948 | 117676292 | Rat | n/a | Region | gene |
| 871 | 735157 | Atp6v1e1 | ATPase H+ transporting V1 subunit E1 | | 4 | 154022358 | 154044486 | Rat | n/a | Region | gene |
| 870 | 1308770 | Mrps25 | mitochondrial ribosomal protein S25 | | 4 | 124668320 | 124680086 | Rat | n/a | Region | gene |
| 869 | 1307038 | Dusp11 | dual specificity phosphatase 11 | | 4 | 118367673 | 118385183 | Rat | n/a | Region | gene |
| 868 | 1307785 | Rassf4 | Ras association domain family member 4 | | 4 | 149897525 | 149932658 | Rat | n/a | Region | gene |
| 867 | 1305836 | Rasgef1a | RasGEF domain family, member 1A | | 4 | 151187533 | 151267982 | Rat | n/a | Region | gene |
| 866 | 1305250 | Pdzrn3 | PDZ domain containing RING finger 3 | | 4 | 133770736 | 133996959 | Rat | n/a | Region | gene |
| 865 | 2027 | Actg2 | actin gamma 2, smooth muscle | | 4 | 116021832 | 116046475 | Rat | n/a | Region | gene |
| 864 | 1305523 | Fbxl14 | F-box and leucine-rich repeat protein 14 | | 4 | 152662542 | 152666360 | Rat | n/a | Region | gene |
| 863 | 1307793 | Pole4 | DNA polymerase epsilon 4, accessory subunit | | 4 | 115165285 | 115171097 | Rat | n/a | Region | gene |
| 862 | 1306709 | Mrpl53 | mitochondrial ribosomal protein L53 | | 4 | 115615329 | 115616219 | Rat | n/a | Region | gene |
| 861 | 1311706 | Hdac11 | histone deacetylase 11 | | 4 | 123645873 | 123667407 | Rat | n/a | Region | gene |
| 860 | 1309746 | Zfp638 | zinc finger protein 638 | | 4 | 116355934 | 116475051 | Rat | n/a | Region | gene |
| 859 | 1560552 | Eefsec | eukaryotic elongation factor, selenocysteine-tRNA-specific | | 4 | 120719616 | 120915779 | Rat | n/a | Region | gene |
| 858 | 1305225 | Ccdc174 | coiled-coil domain containing 174 | | 4 | 124392183 | 124419035 | Rat | n/a | Region | gene |
| 857 | 1308906 | Htra2 | HtrA serine peptidase 2 | | 4 | 115556914 | 115560202 | Rat | n/a | Region | gene |
| 856 | 1359401 | Vom1r95 | vomeronasal 1 receptor 95 | | 4 | 122285444 | 122286388 | Rat | n/a | Region | gene |
| 855 | 1309584 | Irak2 | interleukin-1 receptor-associated kinase 2 | | 4 | 146786004 | 146842615 | Rat | n/a | Region | gene |
| 854 | 1309153 | Smyd5 | SMYD family member 5 | | 4 | 117969615 | 117984082 | Rat | n/a | Region | gene |
| 853 | 1333902 | Or13a1 | olfactory receptor family 13 subfamily A member 1 | | 4 | 149602129 | 149610213 | Rat | n/a | Region | gene |
| 852 | 1560707 | Lrrtm4 | leucine rich repeat transmembrane neuronal 4 | | 4 | 112545874 | 113338713 | Rat | n/a | Region | gene |
| 851 | 1332631 | Or6d12b | olfactory receptor family 6 subfamily D member 12B | | 4 | 149717772 | 149718755 | Rat | n/a | Region | gene |
| 850 | 1309786 | Tprkb | Tp53rk binding protein | | 4 | 118342910 | 118357908 | Rat | n/a | Region | gene |
| 849 | 1333171 | Or6d15b | olfactory receptor family 6 subfamily D member 15B | | 4 | 149839430 | 149840362 | Rat | n/a | Region | gene |
| 848 | 1303172 | Fancd2 | FA complementation group D2 | | 4 | 146679014 | 146743422 | Rat | n/a | Region | gene |
| 847 | 1306889 | Adamts9 | ADAM metallopeptidase with thrombospondin type 1 motif, 9 | | 4 | 125290633 | 125462988 | Rat | n/a | Region | gene |
| 846 | 1303222 | Aicda | activation-induced cytidine deaminase | | 4 | 155774132 | 155783972 | Rat | n/a | Region | gene |
| 845 | 1333628 | Or6d15 | olfactory receptor family 6 subfamily D member 15 | | 4 | 149818596 | 149819528 | Rat | n/a | Region | gene |
| 844 | 1310433 | Setd5 | SET domain containing 5 | | 4 | 146217172 | 146294896 | Rat | n/a | Region | gene |
| 843 | 1549782 | Pcgf1 | polycomb group ring finger 1 | | 4 | 115576165 | 115587019 | Rat | n/a | Region | gene |
| 842 | 1359153 | Usp18 | ubiquitin specific peptidase 18 | | 4 | 154471634 | 154499154 | Rat | n/a | Region | gene |
| 841 | 1310710 | Ccdc77 | coiled-coil domain containing 77 | | 4 | 153534184 | 153566059 | Rat | n/a | Region | gene |
| 840 | 1311302 | Ift122 | intraflagellar transport 122 | | 4 | 148905031 | 148975458 | Rat | n/a | Region | gene |
| 839 | 1310925 | Snrnp27 | small nuclear ribonucleoprotein U4/U6.U5 subunit 27 | | 4 | 119123676 | 119133234 | Rat | n/a | Region | gene |
| 838 | 69077 | Timp4 | TIMP metallopeptidase inhibitor 4 | | 4 | 148306021 | 148312558 | Rat | n/a | Region | gene |
| 837 | 1310932 | Dppa3 | developmental pluripotency-associated 3 | | 4 | 155851461 | 155854845 | Rat | n/a | Region | gene |
| 836 | 1311566 | Emc3 | ER membrane protein complex subunit 3 | | 4 | 146663065 | 146678976 | Rat | n/a | Region | gene |
| 835 | 1310746 | Chchd4 | coiled-coil-helix-coiled-coil-helix domain containing 4 | | 4 | 123968264 | 123977398 | Rat | n/a | Region | gene |
| 834 | 1359355 | M6pr | mannose-6-phosphate receptor, cation dependent | | 4 | 155501080 | 155510219 | Rat | n/a | Region | gene |
| 833 | 1359357 | Eogt | EGF domain specific O-linked N-acetylglucosamine transferase | | 4 | 129718897 | 129756558 | Rat | n/a | Region | gene |
| 832 | 1359363 | Abtb1 | ankyrin repeat and BTB domain containing 1 | | 4 | 121299302 | 121305667 | Rat | n/a | Region | gene |
| 831 | 1308363 | Txnrd3 | thioredoxin reductase 3 | | 4 | 122072548 | 122112493 | Rat | n/a | Region | gene |
| 830 | 1308669 | Foxp1 | forkhead box P1 | | 4 | 131559599 | 132155092 | Rat | n/a | Region | gene |
| 829 | 1311653 | Vgll4 | vestigial-like family member 4 | | 4 | 147925630 | 148038519 | Rat | n/a | Region | gene |
| 828 | 1549781 | Vom1r96 | vomeronasal 1 receptor 96 | | 4 | 122334287 | 122335270 | Rat | n/a | Region | gene |
| 827 | 1332875 | Or6d12c | olfactory receptor family 6 subfamily D member 12C | | 4 | 149777747 | 149778730 | Rat | n/a | Region | gene |
| 826 | 1309212 | Cpne9 | copine family member 9 | | 4 | 146429961 | 146454335 | Rat | n/a | Region | gene |
| 825 | 1307823 | Nfu1 | NFU1 iron-sulfur cluster scaffold | | 4 | 119458981 | 119480162 | Rat | n/a | Region | gene |
| 824 | 1310618 | Mkrn2 | makorin, ring finger protein, 2 | | 4 | 148661529 | 148679580 | Rat | n/a | Region | gene |
| 823 | 1310619 | Atp6v1b1 | ATPase H+ transporting V1 subunit B1 | | 4 | 116223799 | 116242475 | Rat | n/a | Region | gene |
| 822 | 1310096 | Arpc4 | actin related protein 2/3 complex, subunit 4 | | 4 | 146522255 | 146532784 | Rat | n/a | Region | gene |
| 821 | 1307891 | Adipor2 | adiponectin receptor 2 | | 4 | 152524604 | 152588848 | Rat | n/a | Region | gene |
| 820 | 1304975 | Rad52 | RAD52 homolog, DNA repair protein | | 4 | 153106062 | 153128598 | Rat | n/a | Region | gene |
| 819 | 1311313 | Mthfd2 | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase | | 4 | 115811135 | 115822663 | Rat | n/a | Region | gene |
| 818 | 1309499 | Dok1 | docking protein 1 | | 4 | 115537453 | 115540464 | Rat | n/a | Region | gene |
| 817 | 1311590 | Alms1 | ALMS1, centrosome and basal body associated protein | | 4 | 118125581 | 118226005 | Rat | n/a | Region | gene |
| 816 | 1309203 | Phc1 | polyhomeotic homolog 1 | | 4 | 155510274 | 155532636 | Rat | n/a | Region | gene |
| 815 | 1305971 | Lsm3 | LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated | | 4 | 124021023 | 124027269 | Rat | n/a | Region | gene |
| 814 | 1305975 | Bola3 | bolA family member 3 | | 4 | 115853350 | 115862797 | Rat | n/a | Region | gene |
| 813 | 1307144 | Antxr1 | ANTXR cell adhesion molecule 1 | | 4 | 119590770 | 119778232 | Rat | n/a | Region | gene |
| 812 | 1306788 | Lrig1 | leucine-rich repeats and immunoglobulin-like domains 1 | | 4 | 127130899 | 127230956 | Rat | n/a | Region | gene |
| 811 | 1305429 | Kdm5a | lysine demethylase 5A | | 4 | 153565909 | 153643912 | Rat | n/a | Region | gene |
| 810 | 1305768 | Cfap100 | cilia and flagella associated protein 100 | | 4 | 122914693 | 122938994 | Rat | n/a | Region | gene |
| 809 | 1309339 | Marchf8 | membrane associated ring-CH-type finger 8 | | 4 | 149415642 | 149530771 | Rat | n/a | Region | gene |
| 808 | 1308850 | Tmem72 | transmembrane protein 72 | | 4 | 149946296 | 149973550 | Rat | n/a | Region | gene |
| 807 | 619963 | Stambp | Stam binding protein | | 4 | 116055563 | 116083563 | Rat | n/a | Region | gene |
| 806 | 1332818 | Or6d13 | olfactory receptor family 6 subfamily D member 13 | | 4 | 149696014 | 149696997 | Rat | n/a | Region | gene |
| 805 | 1310533 | Crbn | cereblon | | 4 | 139701154 | 139719949 | Rat | n/a | Region | gene |
| 804 | 1308043 | Bms1 | BMS1 ribosome biogenesis factor | | 4 | 151558163 | 151595187 | Rat | n/a | Region | gene |
| 803 | 1309412 | Creld1 | cysteine-rich with EGF-like domains 1 | | 4 | 146631883 | 146641493 | Rat | n/a | Region | gene |
| 802 | 1308963 | Lmcd1 | LIM and cysteine-rich domains 1 | | 4 | 145393153 | 145452049 | Rat | n/a | Region | gene |
| 801 | 1307919 | Mfap5 | microfibril associated protein 5 | | 4 | 155727925 | 155750458 | Rat | n/a | Region | gene |
| 800 | 1307930 | Paip2b | poly(A) binding protein interacting protein 2B | | 4 | 116292001 | 116323387 | Rat | n/a | Region | gene |
| 799 | 1308811 | Slc25a26 | solute carrier family 25 member 26 | | 4 | 127036704 | 127131026 | Rat | n/a | Region | gene |
| 798 | 1309946 | Tsen2 | tRNA splicing endonuclease subunit 2 | | 4 | 148602805 | 148638219 | Rat | n/a | Region | gene |
| 797 | 1305520 | Aak1 | AP2 associated kinase 1 | | 4 | 119300128 | 119451834 | Rat | n/a | Region | gene |
| 796 | 1305397 | Rbsn | rabenosyn, RAB effector | | 4 | 124682228 | 124712578 | Rat | n/a | Region | gene |
| 795 | 1562113 | Cidec | cell death-inducing DFFA-like effector c | | 4 | 146569288 | 146582173 | Rat | n/a | Region | gene |
| 794 | 1562986 | Bmp10 | bone morphogenetic protein 10 | | 4 | 119872066 | 119877694 | Rat | n/a | Region | gene |
| 793 | 1564525 | Mxd1 | max dimerization protein 1 | | 4 | 119097353 | 119118080 | Rat | n/a | Region | gene |
| 792 | 1563166 | Kbtbd8 | kelch repeat and BTB domain containing 8 | | 4 | 127675967 | 127688785 | Rat | n/a | Region | gene |
| 791 | 1560871 | Plxna1 | plexin A1 | | 4 | 121737934 | 121782901 | Rat | n/a | Region | gene |
| 790 | 1563152 | Srgap3 | SLIT-ROBO Rho GTPase activating protein 3 | | 4 | 145839369 | 146070556 | Rat | n/a | Region | gene |
| 789 | 1560289 | C4h3orf20 | similar to human chromosome 3 open reading frame 20 | | 4 | 124422033 | 124470657 | Rat | n/a | Region | gene |
| 788 | 1563660 | Csgalnact2 | chondroitin sulfate N-acetylgalactosaminyltransferase 2 | | 4 | 151271774 | 151308856 | Rat | n/a | Region | gene |
| 787 | 1564754 | Figla | folliculogenesis specific bHLH transcription factor | | 4 | 118432517 | 118436846 | Rat | n/a | Region | gene |
| 786 | 1563492 | Abcf2-ps2 | ATP binding cassette subfamily F member 2, pseudogene 2 | | 4 | 137093916 | 137096351 | Rat | n/a | Region | gene |
| 785 | 1562258 | Ino80b | INO80 complex subunit B | | 4 | 115627907 | 115631069 | Rat | n/a | Region | gene |
| 784 | 1562010 | Ssuh2 | ssu-2 homolog | | 4 | 145502942 | 145521881 | Rat | n/a | Region | gene |
| 783 | 1560795 | Spr-ps1 | sepiapterin reductase, pseudogene 1 | | 4 | 117689458 | 117693286 | Rat | n/a | Region | gene |
| 782 | 1559797 | Eva1a | eva-1 homolog A, regulator of programmed cell death | | 4 | 114593773 | 114643011 | Rat | n/a | Region | gene |
| 781 | 1561981 | Dnajb8 | DnaJ heat shock protein family (Hsp40) member B8 | | 4 | 120681918 | 120685108 | Rat | n/a | Region | gene |
| 780 | 1561200 | Ankrd53 | ankyrin repeat domain 53 | | 4 | 116245561 | 116253018 | Rat | n/a | Region | gene |
| 779 | 1564178 | Gdf3 | growth differentiation factor 3 | | 4 | 155831572 | 155835953 | Rat | n/a | Region | gene |
| 778 | 1565913 | Cd207 | CD207 molecule | | 4 | 116155229 | 116161587 | Rat | n/a | Region | gene |
| 777 | 1566019 | C4h2orf81 | similar to human chromosome 2 open reading frame 81 | | 4 | 115661617 | 115667929 | Rat | n/a | Region | gene |
| 776 | 1562716 | Tcp1-ps1 | t-complex protein 1, pseudogene 1 | | 4 | 120705645 | 120707221 | Rat | n/a | Region | gene |
| 775 | 1562214 | Dcp1b | decapping mRNA 1B | | 4 | 152358267 | 152395747 | Rat | n/a | Region | gene |
| 774 | 1561494 | Wdr54 | WD repeat domain 54 | | 4 | 115654968 | 115677979 | Rat | n/a | Region | gene |
| 773 | 1564159 | Eef1e1-ps2 | eukaryotic translation elongation factor 1 epsilon 1, pseudogene 2 | | 4 | 154775536 | 154776601 | Rat | n/a | Region | gene |
| 772 | 1560120 | Akr1b1-ps2 | aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 2 | | 4 | 150078484 | 150079434 | Rat | n/a | Region | gene |
| 771 | 1564002 | Emx1 | empty spiracles homeobox 1 | | 4 | 117725148 | 117741616 | Rat | n/a | Region | gene |
| 770 | 1564009 | Tada3 | transcriptional adaptor 3 | | 4 | 146510213 | 146521975 | Rat | n/a | Region | gene |
| 769 | 1560851 | Rimklb | ribosomal modification protein rimK-like family member B | | 4 | 155664392 | 155706888 | Rat | n/a | Region | gene |
| 768 | 1565700 | Depp1 | DEPP autophagy regulator 1 | | 4 | 149910794 | 149913013 | Rat | n/a | Region | gene |
| 767 | 1564145 | Lrrn1 | leucine rich repeat neuronal 1 | | 4 | 140476752 | 140520210 | Rat | n/a | Region | gene |
| 766 | 1561296 | Zxdc | ZXD family zinc finger C | | 4 | 122882389 | 122914486 | Rat | n/a | Region | gene |
| 765 | 1560852 | Thumpd3 | THUMP domain containing 3 | | 4 | 146185422 | 146209802 | Rat | n/a | Region | gene |
| 764 | 1561565 | Ier3ip1-ps1 | immediate early response 3 interacting protein 1, pseudogene 1 | | 4 | 132342131 | 132342625 | Rat | n/a | Region | gene |
| 763 | 1560859 | Asprv1 | aspartic peptidase, retroviral-like 1 | | 4 | 119077415 | 119078887 | Rat | n/a | Region | gene |
| 762 | 1561779 | Ccdc142 | coiled-coil domain containing 142 | | 4 | 115606151 | 115616223 | Rat | n/a | Region | gene |
| 761 | 1561056 | B4galnt3 | beta-1,4-N-acetyl-galactosaminyl transferase 3 | | 4 | 153409019 | 153509019 | Rat | n/a | Region | gene |
| 760 | 1561172 | Lbx2 | ladybird homeobox 2 | | 4 | 115591974 | 115593859 | Rat | n/a | Region | gene |
| 759 | 1311011 | Loxl3 | lysyl oxidase-like 3 | | 4 | 115540640 | 115556958 | Rat | n/a | Region | gene |
| 758 | 1311023 | Dysf | dysferlin | | 4 | 116490877 | 116690709 | Rat | n/a | Region | gene |
| 757 | 735148 | Il17re | interleukin 17 receptor E | | 4 | 146604547 | 146618206 | Rat | n/a | Region | gene |
| 756 | 1561319 | Pcbp1 | poly(rC) binding protein 1 | | 4 | 118972698 | 118974705 | Rat | n/a | Region | gene |
| 755 | 1562419 | Prrt3 | proline-rich transmembrane protein 3 | | 4 | 146641173 | 146650487 | Rat | n/a | Region | gene |
| 754 | 1359504 | Mical3 | microtubule associated monooxygenase, calponin and LIM domain containing 3 | | 4 | 154152776 | 154353274 | Rat | n/a | Region | gene |
| 753 | 1311934 | Gkn2 | gastrokine 2 | | 4 | 119778326 | 119824366 | Rat | n/a | Region | gene |
| 752 | 1359098 | Vom1r94 | vomeronasal 1 receptor 94 | | 4 | 122274165 | 122275145 | Rat | n/a | Region | gene |
| 751 | 1359265 | Gmcl1 | germ cell-less 1, spermatogenesis associated | | 4 | 119140598 | 119179891 | Rat | n/a | Region | gene |
| 750 | 1334034 | Or6d14 | olfactory receptor family 6 subfamily D member 14 | | 4 | 149793474 | 149794436 | Rat | n/a | Region | gene |
| 749 | 1562825 | Chst13 | carbohydrate sulfotransferase 13 | | 4 | 122824022 | 122837940 | Rat | n/a | Region | gene |
| 748 | 1562830 | Arl8b | ADP-ribosylation factor like GTPase 8B | | 4 | 141748634 | 141792605 | Rat | n/a | Region | gene |
| 747 | 1564292 | Nop2-ps4 | NOP2 nucleolar protein, pseudogene 4 | | 4 | 128479630 | 128481920 | Rat | n/a | Region | gene |
| 746 | 1549694 | Vom1r98 | vomeronasal 1 receptor 98 | | 4 | 122375967 | 122376911 | Rat | n/a | Region | gene |
| 745 | 1549703 | Gfpt1 | glutamine fructose-6-phosphate transaminase 1 | | 4 | 119496691 | 119546472 | Rat | n/a | Region | gene |
| 744 | 1549711 | Tmem43 | transmembrane protein 43 | | 4 | 123977680 | 123992823 | Rat | n/a | Region | gene |
| 743 | 1559850 | Zfp637 | zinc finger protein 637 | | 4 | 150984940 | 151010079 | Rat | n/a | Region | gene |
| 742 | 1560638 | Exoc6b | exocyst complex component 6B | | 4 | 117094741 | 117550221 | Rat | n/a | Region | gene |
| 741 | 1311255 | Ttll3 | tubulin tyrosine ligase like 3 | | 4 | 146532958 | 146558425 | Rat | n/a | Region | gene |
| 740 | 3556 | Ret | ret proto-oncogene | | 4 | 151325969 | 151368176 | Rat | n/a | Region | gene |
| 739 | 1564182 | Cecr2 | CECR2, histone acetyl-lysine reader | | 4 | 153890310 | 153998078 | Rat | n/a | Region | gene |
| 738 | 1549740 | Vom1r93 | vomeronasal 1 receptor 93 | | 4 | 122234616 | 122242958 | Rat | n/a | Region | gene |
| 737 | 1310796 | Plxnd1 | plexin D1 | | 4 | 149002786 | 149043097 | Rat | n/a | Region | gene |
| 736 | 1559800 | Hmces | 5-hydroxymethylcytosine binding, ES cell specific | | 4 | 120392812 | 120415616 | Rat | n/a | Region | gene |
| 735 | 1549727 | Vom1r100 | vomeronasal 1 receptor 100 | | 4 | 122468150 | 122471495 | Rat | n/a | Region | gene |
| 734 | 1310736 | Ankrd26 | ankyrin repeat domain containing 26 | | 4 | 151670604 | 151740032 | Rat | n/a | Region | gene |
| 733 | 1563030 | Tafa1 | TAFA chemokine like family member 1 | | 4 | 128738028 | 129244223 | Rat | n/a | Region | gene |
| 732 | 1562038 | Cacna2d4 | calcium voltage-gated channel auxiliary subunit alpha2delta 4 | | 4 | 152408588 | 152521478 | Rat | n/a | Region | gene |
| 731 | 1560353 | Rpl13-ps10 | ribosomal protein L13, pseudogene 10 | | 4 | 136905705 | 136907969 | Rat | n/a | Region | gene |
| 730 | 1562105 | Arhgap25 | Rho GTPase activating protein 25 | | 4 | 119896844 | 119974982 | Rat | n/a | Region | gene |
| 729 | 1333047 | Or6d13c | olfactory receptor family 6 subfamily D member 13C | | 4 | 149752294 | 149753277 | Rat | n/a | Region | gene |
| 728 | 1333048 | Or6d12 | olfactory receptor family 6 subfamily D member 12 | | 4 | 149648444 | 149649427 | Rat | n/a | Region | gene |
| 727 | 727967 | Lhfpl4 | LHFPL tetraspan subfamily member 4 | | 4 | 146317110 | 146340073 | Rat | n/a | Region | gene |
| 726 | 1311909 | Tmcc1 | transmembrane and coiled-coil domain family 1 | | 4 | 149069252 | 149239585 | Rat | n/a | Region | gene |
| 725 | 1563842 | M1ap | meiosis 1 associated protein | | 4 | 115445910 | 115536745 | Rat | n/a | Region | gene |
| 724 | 1333814 | Or6d13b | olfactory receptor family 6 subfamily D member 13B | | 4 | 149673586 | 149674569 | Rat | n/a | Region | gene |
| 723 | 1566236 | H1f8 | H1.8 linker histone | | 4 | 148993133 | 148998254 | Rat | n/a | Region | gene |
| 722 | 3658 | Sema4f | ssemaphorin 4F | | 4 | 115411411 | 115437721 | Rat | n/a | Region | gene |
| 721 | 1583000 | Eef1g-ps15 | eukaryotic translation elongation factor 1 gamma, pseudogene 15 | | 4 | 127841801 | 127847162 | Rat | n/a | Region | gene |
| 720 | 1587381 | Mrpl19 | mitochondrial ribosomal protein L19 | | 4 | 114521824 | 114526053 | Rat | n/a | Region | gene |
| 719 | 1584828 | Brpf1 | bromodomain and PHD finger containing, 1 | | 4 | 146456325 | 146472781 | Rat | n/a | Region | gene |
| 718 | 1585860 | Smokxl-ps3 | sperm motility kinase X like, pseudogene 3 | | 4 | 117569008 | 117569987 | Rat | n/a | Region | gene |
| 717 | 1585993 | Ppp1r15b-ps1 | protein phosphatase 1, regulatory subunit 15B, pseudogene 1 | | 4 | 149756752 | 149759826 | Rat | n/a | Region | gene |
| 716 | 1585995 | Kpna1-ps6 | karyopherin subunit alpha 1, pseudogene 6 | | 4 | 136818724 | 136820326 | Rat | n/a | Region | gene |
| 715 | 1585997 | Elob-ps12 | elongin B, pseduogene 12 | | 4 | 126816689 | 126817049 | Rat | n/a | Region | gene |
| 714 | 1585999 | Kbtbd12 | kelch repeat and BTB domain containing 12 | | 4 | 121014636 | 121088701 | Rat | n/a | Region | gene |
| 713 | 1586000 | Rps15-ps12 | ribosomal protein S15, pseudogene 12 | | 4 | 116373761 | 116374229 | Rat | n/a | Region | gene |
| 712 | 1586001 | Plin3-ps2 | perilipin 3, pseudogene 2 | | 4 | 113755510 | 113756823 | Rat | n/a | Region | gene |
| 711 | 1583112 | Pradc1 | protease-associated domain containing 1 | | 4 | 117984732 | 117989710 | Rat | n/a | Region | gene |
| 710 | 1584713 | Snrpg | small nuclear ribonucleoprotein polypeptide G | | 4 | 118812278 | 118819827 | Rat | n/a | Region | gene |
| 709 | 1586441 | Rplp0-ps15 | ribosomal protein lateral stalk subunit P0, pseudogene 15 | | 4 | 126179018 | 126180835 | Rat | n/a | Region | gene |
| 708 | 1584727 | Rpl4-ps7 | ribosomal protein L4, pseudogene 7 | | 4 | 153376053 | 153378932 | Rat | n/a | Region | gene |
| 707 | 1586482 | Gxylt2 | glucoside xylosyltransferase 2 | | 4 | 133347230 | 133449708 | Rat | n/a | Region | gene |
| 706 | 1583233 | H2az2l1 | H2A.Z histone variant 2 like 1 | | 4 | 151152904 | 151153567 | Rat | n/a | Region | gene |
| 705 | 1583218 | Rps25l3 | ribosomal protein S25 like 3 | | 4 | 120933765 | 120934259 | Rat | n/a | Region | gene |
| 704 | 1564924 | Lmod3 | leiomodin 3 | | 4 | 129843964 | 129858684 | Rat | n/a | Region | gene |
| 703 | 1586150 | Tamm41 | TAM41 mitochondrial translocator assembly and maintenance homolog | | 4 | 148070388 | 148103728 | Rat | n/a | Region | gene |
| 702 | 1561270 | Zfp248 | zinc finger protein 248 | | 4 | 151605433 | 151630249 | Rat | n/a | Region | gene |
| 701 | 1566313 | Cpamd8 | C3 and PZP-like, alpha-2-macroglobulin domain containing 8 | | 4 | 155332827 | 155413098 | Rat | n/a | Region | gene |
| 700 | 1566130 | Fbxo41 | F-box protein 41 | | 4 | 118007517 | 118039547 | Rat | n/a | Region | gene |
| 699 | 1562910 | Noto | notochord homeobox | | 4 | 117961163 | 117965402 | Rat | n/a | Region | gene |
| 698 | 1565292 | Copg1 | COPI coat complex subunit gamma 1 | | 4 | 120366540 | 120392502 | Rat | n/a | Region | gene |
| 697 | 1566041 | Tuba8 | tubulin, alpha 8 | | 4 | 154440045 | 154456918 | Rat | n/a | Region | gene |
| 696 | 1565997 | Fancd2os | FANCD2 opposite strand | | 4 | 146740863 | 146747547 | Rat | n/a | Region | gene |
| 695 | 1565557 | Aplf | aprataxin and PNKP like factor | | 4 | 120070471 | 120122656 | Rat | n/a | Region | gene |
| 694 | 1584384 | Tma7l1 | translation machinery associated 7 homolog like 1 | | 4 | 118986414 | 118988248 | Rat | n/a | Region | gene |
| 693 | 1564573 | Vom1r92 | vomeronasal 1 receptor 92 | | 4 | 122212290 | 122225494 | Rat | n/a | Region | gene |
| 692 | 1565488 | Jagn1 | jagunal homolog 1 | | 4 | 146591577 | 146596287 | Rat | n/a | Region | gene |
| 691 | 1565882 | Setmar | SET domain and mariner transposase fusion gene | | 4 | 141046058 | 141058183 | Rat | n/a | Region | gene |
| 690 | 1565596 | H1f10 | H1.10 linker histone | | 4 | 120440515 | 120441578 | Rat | n/a | Region | gene |
| 689 | 1563633 | Edem1 | ER degradation enhancing alpha-mannosidase like protein 1 | | 4 | 141797631 | 141829717 | Rat | n/a | Region | gene |
| 688 | 1563294 | Eno1-ps20 | enolase 1, pseudogene 20 | | 4 | 150927402 | 150929143 | Rat | n/a | Region | gene |
| 687 | 1359555 | Sec13 | SEC13 homolog, nuclear pore and COPII coat complex component | | 4 | 146877739 | 146891130 | Rat | n/a | Region | gene |
| 686 | 1565300 | Rab43 | RAB43, member RAS oncogene family | | 4 | 120249650 | 120269174 | Rat | n/a | Region | gene |
| 685 | 1565302 | Tmem121b | transmembrane protein 121B | | 4 | 153695191 | 153700104 | Rat | n/a | Region | gene |
| 684 | 1561619 | Nat8f2 | N-acetyltransferase 8 (GCN5-related) family member 2 | | 4 | 118319984 | 118323159 | Rat | n/a | Region | gene |
| 683 | 1592965 | Rps27a-ps18 | ribosomal protein S27a, pseudogene 18 | | 4 | 115353266 | 115353807 | Rat | n/a | Region | gene |
| 682 | 1591392 | Prr20e | proline rich 20E | | 4 | 121566632 | 121574734 | Rat | n/a | Region | gene |
| 681 | 1589573 | Slc41a3 | solute carrier family 41, member 3 | | 4 | 123109555 | 123154766 | Rat | n/a | Region | gene |
| 680 | 1587025 | Tmem40 | transmembrane protein 40 | | 4 | 148791509 | 148819287 | Rat | n/a | Region | gene |
| 679 | 1586185 | Eif4e3 | eukaryotic translation initiation factor 4E family member 3 | | 4 | 132258502 | 132301808 | Rat | n/a | Region | gene |
| 678 | 1586985 | Efcab12 | EF-hand calcium binding domain 12 | | 4 | 148869381 | 148892922 | Rat | n/a | Region | gene |
| 677 | 1590584 | Tet3 | tet methylcytosine dioxygenase 3 | | 4 | 115867412 | 115964433 | Rat | n/a | Region | gene |
| 676 | 1590470 | Slc25a18 | solute carrier family 25 member 18 | | 4 | 154000808 | 154021373 | Rat | n/a | Region | gene |
| 675 | 1592944 | Ssbl1 | small RNA binding exonuclease protection factor La like 1 | | 4 | 149078162 | 149079669 | Rat | n/a | Region | gene |
| 674 | 1592322 | Rpl13-ps14 | ribosomal protein L13, pseudogene 14 | | 4 | 134558719 | 134564121 | Rat | n/a | Region | gene |
| 673 | 1587777 | Uroc1 | urocanate hydratase 1 | | 4 | 122844933 | 122876584 | Rat | n/a | Region | gene |
| 672 | 1587811 | C4h3orf22 | similar to human chromosome 3 open reading frame 22 | | 4 | 122817681 | 122822175 | Rat | n/a | Region | gene |
| 671 | 1584703 | Ass1-ps2 | argininosuccinate synthase 1, pseudogene 2 | | 4 | 117912849 | 117927565 | Rat | n/a | Region | gene |
| 670 | 1586016 | Hsp90aa1-ps14 | heat shock protein 90 alpha family class A member 1, pseudogene 14 | | 4 | 149745787 | 149748099 | Rat | n/a | Region | gene |
| 669 | 1586017 | Tatdn2 | TatD DNase domain containing 2 | | 4 | 146845156 | 146865708 | Rat | n/a | Region | gene |
| 668 | 1586018 | Psmc4-ps3 | proteasome 26S subunit, ATPase 4, pseudogene 3 | | 4 | 142081325 | 142082608 | Rat | n/a | Region | gene |
| 667 | 1586019 | Pgk1-ps9 | phosphoglycerate kinase 1, pseudogene 9 | | 4 | 139263587 | 139265702 | Rat | n/a | Region | gene |
| 666 | 1586020 | G3bp1-ps8 | G3BP stress granule assembly factor 1, pseudogene 8 | | 4 | 136952803 | 136954495 | Rat | n/a | Region | gene |
| 665 | 1587829 | Vom1r104 | vomeronasal 1 receptor 104 | | 4 | 122768885 | 122769850 | Rat | n/a | Region | gene |
| 664 | 1589884 | Rps7-ps6 | ribosomal protein S7, pseudogene 6 | | 4 | 140380731 | 140381276 | Rat | n/a | Region | gene |
| 663 | 1584998 | Pex26 | peroxisomal biogenesis factor 26 | | 4 | 154414332 | 154426954 | Rat | n/a | Region | gene |
| 662 | 1584999 | Mug1l1 | murinoglobulin 1 like 1 | | 4 | 154980279 | 155036688 | Rat | n/a | Region | gene |
| 661 | 1585874 | Mbd4 | methyl-CpG binding domain 4 DNA glycosylase | | 4 | 148893049 | 148904833 | Rat | n/a | Region | gene |
| 660 | 1587001 | Lrtm2 | leucine-rich repeats and transmembrane domains 2 | | 4 | 152485863 | 152508248 | Rat | n/a | Region | gene |
| 659 | 1584878 | Sav1-ps1 | salvador family WW domain containing protein 1, pseudogene 1 | | 4 | 155048501 | 155049735 | Rat | n/a | Region | gene |
| 658 | 1589006 | Vom1r99 | vomeronasal 1 receptor 99 | | 4 | 122430887 | 122431711 | Rat | n/a | Region | gene |
| 657 | 1586021 | Tuba1b-ps2 | tubulin, alpha 1B, pseudogene 2 | | 4 | 134342304 | 134343235 | Rat | n/a | Region | gene |
| 656 | 1586024 | Hnrnpa1-ps45 | heterogeneous nuclear ribonucleoprotein A1, pseudogene 45 | | 4 | 127704697 | 127705507 | Rat | n/a | Region | gene |
| 655 | 1586025 | Magi1 | membrane associated guanylate kinase, WW and PDZ domain containing 1 | | 4 | 126205663 | 126811354 | Rat | n/a | Region | gene |
| 654 | 1586026 | Emilin1-ps1 | elastin microfibril interfacer 1, pseudogene 1 | | 4 | 118262387 | 118266491 | Rat | n/a | Region | gene |
| 653 | 1586028 | Ldha-ps9 | lactate dehydrogenase A, pseudogene 9 | | 4 | 113345717 | 113349041 | Rat | n/a | Region | gene |
| 652 | 1591759 | Rpl23al6 | ribosomal protein L23A like 6 | | 4 | 149492385 | 149492849 | Rat | n/a | Region | gene |
| 651 | 1593191 | Iqsec3 | IQ motif and Sec7 domain ArfGEF 3 | | 4 | 154610933 | 154707310 | Rat | n/a | Region | gene |
| 650 | 1592069 | Rab11fip5 | RAB11 family interacting protein 5 | | 4 | 117871301 | 117908819 | Rat | n/a | Region | gene |
| 649 | 1597443 | Tafa4 | TAFA chemokine like family member 4 | | 4 | 129437466 | 129671320 | Rat | n/a | Region | gene |
| 648 | 1591766 | Dqx1 | DEAQ box RNA-dependent ATPase 1 | | 4 | 115563497 | 115572598 | Rat | n/a | Region | gene |
| 647 | 1592353 | Smtn-ps1 | smoothelin, pseudogene 1 | | 4 | 133742253 | 133744275 | Rat | n/a | Region | gene |
| 646 | 1596846 | Rps25-ps8 | ribosomal protein S25, pseudogene 8 | | 4 | 115473792 | 115474236 | Rat | n/a | Region | gene |
| 645 | 1595506 | Tlx2 | T-cell leukemia homeobox 2 | | 4 | 115573736 | 115576097 | Rat | n/a | Region | gene |
| 644 | 1590113 | Apool2 | apolipoprotein O-like 2 | | 4 | 127274472 | 127275699 | Rat | n/a | Region | gene |
| 643 | 1591777 | Aup1 | AUP1, lipid droplet regulating VLDL assembly factor | | 4 | 115560274 | 115563346 | Rat | n/a | Region | gene |
| 642 | 1596703 | Ube2m-ps1 | ubiquitin-conjugating enzyme E2M, pseudogene 1 | | 4 | 150686815 | 150745259 | Rat | n/a | Region | gene |
| 641 | 1598136 | Brk1 | BRICK1 subunit of SCAR/WAVE actin nucleating complex | | 4 | 146750821 | 146766050 | Rat | n/a | Region | gene |
| 640 | 1561601 | Gp9 | glycoprotein IX (platelet) | | 4 | 120235500 | 120237110 | Rat | n/a | Region | gene |
| 639 | 1597753 | Dppa3-ps3 | developmental pluripotency-associated 3, pseudogene 3 | | 4 | 151323404 | 151325118 | Rat | n/a | Region | gene |
| 638 | 1597754 | Gkn3 | gastrokine 3 | | 4 | 119828859 | 119833924 | Rat | n/a | Region | gene |
| 637 | 1597729 | Polr2l-ps2 | RNA polymerase II, I and III subunit L, pseudogene 2 | | 4 | 151425481 | 151425881 | Rat | n/a | Region | gene |
| 636 | 1596494 | Efcc1 | EF-hand and coiled-coil domain containing 1 | | 4 | 120188202 | 120223464 | Rat | n/a | Region | gene |
| 635 | 1595483 | Rps9-ps10 | ribosomal protein S9, pseudogene 10 | | 4 | 113401645 | 113402234 | Rat | n/a | Region | gene |
| 634 | 1596313 | Iqsec1 | IQ motif and Sec7 domain ArfGEF 1 | | 4 | 123168719 | 123488300 | Rat | n/a | Region | gene |
| 633 | 1594207 | Got2l1 | glutamatic-oxaloacetic transaminase 2, mitochondrial like 1 | | 4 | 114189936 | 114190548 | Rat | n/a | Region | gene |
| 632 | 2293498 | Zfp9 | zinc finger protein 9 | | 4 | 151638724 | 151656740 | Rat | n/a | Region | gene |
| 631 | 2316381 | Vom1r-ps87 | vomeronasal 1 receptor pseudogene 87 | | 4 | 123930673 | 123931299 | Rat | n/a | Region | gene |
| 630 | 2316382 | Vom1r-ps86 | vomeronasal 1 receptor pseudogene 86 | | 4 | 122686949 | 122687878 | Rat | n/a | Region | gene |
| 629 | 2316383 | Vom1r-ps85 | vomeronasal 1 receptor pseudogene 85 | | 4 | 122625876 | 122626474 | Rat | n/a | Region | gene |
| 628 | 2316384 | Vom1r-ps84 | vomeronasal 1 receptor pseudogene 84 | | 4 | 122613355 | 122614266 | Rat | n/a | Region | gene |
| 627 | 2316385 | Vom1r-ps83 | vomeronasal 1 receptor pseudogene 83 | | 4 | 122608252 | 122609154 | Rat | n/a | Region | gene |
| 626 | 2316386 | Vom1r-ps82 | vomeronasal 1 receptor pseudogene 82 | | 4 | 122595522 | 122596518 | Rat | n/a | Region | gene |
| 625 | 2316387 | Vom1r-ps81 | vomeronasal 1 receptor pseudogene 81 | | 4 | 122586021 | 122586924 | Rat | n/a | Region | gene |
| 624 | 2316388 | Vom1r-ps80 | vomeronasal 1 receptor pseudogene 80 | | 4 | 122396580 | 122396744 | Rat | n/a | Region | gene |
| 623 | 2316389 | Vom1r-ps79 | vomeronasal 1 receptor pseudogene 79 | | 4 | 122394932 | 122395749 | Rat | n/a | Region | gene |
| 622 | 2316390 | Vom1r-ps78 | vomeronasal 1 receptor pseudogene 78 | | 4 | 122370207 | 122371034 | Rat | n/a | Region | gene |
| 621 | 2316391 | Vom1r-ps77 | vomeronasal 1 receptor pseudogene 77 | | 4 | 122311684 | 122312578 | Rat | n/a | Region | gene |
| 620 | 2316408 | Vom1r103 | vomeronasal 1 receptor 103 | | 4 | 122723226 | 122730713 | Rat | n/a | Region | gene |
| 619 | 2319160 | Dynll1l1 | dynein light chain LC8-type 1 like 1 | | 4 | 126581958 | 126582522 | Rat | n/a | Region | gene |
| 618 | 2319333 | Apoo-ps2 | apolipoprotein O, pseudogene 2 | | 4 | 146587525 | 146589978 | Rat | n/a | Region | gene |
| 617 | 2319464 | Edf1-ps2 | endothelial differentiation-related factor 1, pseudogene 2 | | 4 | 148247091 | 148258212 | Rat | n/a | Region | gene |
| 616 | 2319475 | Ggact-ps2 | gamma-glutamylamine cyclotransferase, pseudogene 2 | | 4 | 146504023 | 146505562 | Rat | n/a | Region | gene |
| 615 | 2319531 | Cct3-ps6 | chaperonin containing TCP1 subunit 3, pseudogene 6 | | 4 | 146490625 | 146500878 | Rat | n/a | Region | gene |
| 614 | 2320195 | Ssbp1-ps1 | single stranded DNA binding protein 1, pseudogene 1 | | 4 | 126884577 | 126890225 | Rat | n/a | Region | gene |
| 613 | 2323419 | Polr2m-ps3 | RNA polymerase II subunit M, pseudogene 3 | | 4 | 122141718 | 122144244 | Rat | n/a | Region | gene |
| 612 | 2320714 | Mkrn2os | MKRN2 opposite strand | | 4 | 148644489 | 148653396 | Rat | n/a | Region | gene |
| 611 | 2322888 | Rpl22-ps2 | ribosomal protein L22, pseudogene 2 | | 4 | 119350419 | 119350883 | Rat | n/a | Region | gene |
| 610 | 2323009 | Mdfic2 | MyoD family inhibitor domain containing 2 | | 4 | 130845260 | 130948054 | Rat | n/a | Region | gene |
| 609 | 2324329 | Nat8-ps1 | N-acetyltransferase 8, pseudogene 1 | | 4 | 118303631 | 118305781 | Rat | n/a | Region | gene |
| 608 | 2323735 | Gsta4-ps4 | glutathione S-transferase alpha 4, pseudogene 4 | | 4 | 120318859 | 120320679 | Rat | n/a | Region | gene |
| 607 | 2323785 | Cfap92 | cilia and flagella associated protein 92 | | 4 | 120126565 | 120181575 | Rat | n/a | Region | gene |
| 606 | 2323903 | Psma3-ps3 | proteasome 20S subunit alpha 3, pseudogene 3 | | 4 | 127029644 | 127030164 | Rat | n/a | Region | gene |
| 605 | 6492017 | Rpl4-ps2 | ribosomal protein L4, pseudogene 2 | | 4 | 136330114 | 136331466 | Rat | n/a | Region | gene |
| 604 | 6490793 | Vdac2-ps4 | voltage-dependent anion channel 2, pseudogene 4 | | 4 | 154880345 | 154881160 | Rat | n/a | Region | gene |
| 603 | 6493044 | LOC100911370 | uncharacterized LOC100911370 | | 4 | 114459942 | 114463108 | Rat | n/a | Region | gene |
| 602 | 6491335 | Tuba1b-ps4 | tubulin, alpha 1B, pseudogene 4 | | 4 | 148253286 | 148254718 | Rat | n/a | Region | gene |
| 601 | 6487745 | Actg1-ps3 | actin, gamma 1, pseudogene 3 | | 4 | 140834718 | 140835768 | Rat | n/a | Region | gene |
| 600 | 6491660 | Thumpd3-as1 | THUMPD3 antisense RNA 1 | | 4 | 146210520 | 146217026 | Rat | n/a | Region | gene |
| 599 | 6502210 | Zfp239 | zinc finger protein 239 | | 4 | 151029431 | 151039283 | Rat | n/a | Region | gene |
| 598 | 6497663 | LOC100910604 | uncharacterized LOC100910604 | | 4 | 120187658 | 120188705 | Rat | n/a | Region | gene |
| 597 | 7499834 | LOC102548450 | uncharacterized LOC102548450 | | 4 | 146564239 | 146568426 | Rat | n/a | Region | gene |
| 596 | 7508836 | LOC102549269 | uncharacterized LOC102549269 | | 4 | 128652499 | 128742024 | Rat | n/a | Region | gene |
| 595 | 7512196 | Vom1r97l1 | vomeronasal 1 receptor 97 like 1 | | 4 | 122166102 | 122172598 | Rat | n/a | Region | gene |
| 594 | 7539827 | LOC102548902 | uncharacterized LOC102548902 | | 4 | 124160535 | 124201206 | Rat | n/a | Region | gene |
| 593 | 7520921 | Prdx6-ps2 | peroxiredoxin 6, pseudogene 2 | | 4 | 114684131 | 114684952 | Rat | n/a | Region | gene |
| 592 | 7650908 | LOC102548361 | uncharacterized LOC102548361 | | 4 | 115950040 | 115953954 | Rat | n/a | Region | gene |
| 591 | 7621965 | LOC102553072 | uncharacterized LOC102553072 | | 4 | 154499466 | 154500917 | Rat | n/a | Region | gene |
| 590 | 7636572 | Nat8f4 | N-acetyltransferase 8 (GCN5-related) family member 4 | | 4 | 118326092 | 118332591 | Rat | n/a | Region | gene |
| 589 | 7575330 | LOC102548867 | uncharacterized LOC102548867 | | 4 | 147482960 | 147497153 | Rat | n/a | Region | gene |
| 588 | 7623898 | LOC102548337 | uncharacterized LOC102548337 | | 4 | 146168757 | 146185408 | Rat | n/a | Region | gene |
| 587 | 7609120 | LOC102548080 | uncharacterized LOC102548080 | | 4 | 145820794 | 145887127 | Rat | n/a | Region | gene |
| 586 | 7643253 | Rrs1-ps7 | ribosome biogenesis regulator 1 homolog, pseudogene 7 | | 4 | 128616299 | 128619872 | Rat | n/a | Region | gene |
| 585 | 7661237 | LOC102554570 | uncharacterized LOC102554570 | | 4 | 125334112 | 125359366 | Rat | n/a | Region | gene |
| 584 | 7590189 | LOC102555978 | uncharacterized LOC102555978 | | 4 | 125459772 | 125773012 | Rat | n/a | Region | gene |
| 583 | 7591615 | LOC102555035 | uncharacterized LOC102555035 | | 4 | 121464929 | 121479571 | Rat | n/a | Region | gene |
| 582 | 7547913 | LOC102549328 | uncharacterized LOC102549328 | | 4 | 118400779 | 118416614 | Rat | n/a | Region | gene |
| 581 | 7562079 | LOC102554068 | uncharacterized LOC102554068 | | 4 | 120590582 | 120622585 | Rat | n/a | Region | gene |
| 580 | 7550029 | LOC102555094 | uncharacterized LOC102555094 | | 4 | 121511450 | 121516890 | Rat | n/a | Region | gene |
| 579 | 7565639 | LOC102549329 | uncharacterized LOC102549329 | | 4 | 136745668 | 136762242 | Rat | n/a | Region | gene |
| 578 | 7552576 | Stxbp3-ps1 | syntaxin binding protein 3, pseudogene 1 | | 4 | 111049442 | 111054421 | Rat | n/a | Region | gene |
| 577 | 7553480 | LOC102554857 | uncharacterized LOC102554857 | | 4 | 124441221 | 124498179 | Rat | n/a | Region | gene |
| 576 | 7708743 | LOC102556090 | uncharacterized LOC102556090 | | 4 | 111069839 | 111075961 | Rat | n/a | Region | gene |
| 575 | 7688358 | LOC102556035 | uncharacterized LOC102556035 | | 4 | 110915998 | 110999186 | Rat | n/a | Region | gene |
| 574 | 7711844 | LOC102547728 | uncharacterized LOC102547728 | | 4 | 115172801 | 115177968 | Rat | n/a | Region | gene |
| 573 | 7731047 | LOC102555697 | uncharacterized LOC102555697 | | 4 | 133577659 | 133647925 | Rat | n/a | Region | gene |
| 572 | 7667063 | LOC102554372 | uncharacterized LOC102554372 | | 4 | 119012925 | 119030617 | Rat | n/a | Region | gene |
| 571 | 7696532 | LOC102554942 | uncharacterized LOC102554942 | | 4 | 121401011 | 121454903 | Rat | n/a | Region | gene |
| 570 | 7669867 | LOC102555037 | uncharacterized LOC102555037 | | 4 | 132153125 | 132201203 | Rat | n/a | Region | gene |
| 569 | 7723051 | LOC102547466 | uncharacterized LOC102547466 | | 4 | 141491266 | 141542083 | Rat | n/a | Region | gene |
| 568 | 7749382 | LOC102548743 | uncharacterized LOC102548743 | | 4 | 150498770 | 150548561 | Rat | n/a | Region | gene |
| 567 | 7728321 | Casp6-ps2 | caspase 6, pseudogene 2 | | 4 | 153024536 | 153025248 | Rat | n/a | Region | gene |
| 566 | 9142253 | Ybx1-ps2 | Y box binding protein 1, pseudogene 2 | | 4 | 118133614 | 118134832 | Rat | n/a | Region | gene |
| 565 | 9124640 | LOC103692179 | 60S ribosomal protein L34 pseudogene | | 4 | 120362254 | 120362604 | Rat | n/a | Region | gene |
| 564 | 9229745 | LOC103692198 | uncharacterized LOC103692198 | | 4 | 132521989 | 132539049 | Rat | n/a | Region | gene |
| 563 | 9252280 | LOC103692180 | uncharacterized LOC103692180 | | 4 | 120584341 | 120590943 | Rat | n/a | Region | gene |
| 562 | 9301889 | LOC103692187 | uncharacterized LOC103692187 | | 4 | 124712546 | 124722083 | Rat | n/a | Region | gene |
| 561 | 9389444 | Vax2l | ventral anterior homeobox 2 like | | 4 | 116178416 | 116195253 | Rat | n/a | Region | gene |
| 560 | 9472652 | Rps12l11 | ribosomal protein S12 like 11 | | 4 | 153219586 | 153220023 | Rat | n/a | Region | gene |
| 559 | 9455361 | LOC103694898 | COMM domain-containing protein 6 pseudogene | | 4 | 153087395 | 153094324 | Rat | n/a | Region | gene |
| 558 | 11461811 | LOC108350742 | uncharacterized LOC108350742 | | 4 | 141571301 | 141599424 | Rat | n/a | Region | gene |
| 557 | 11463298 | LOC108350876 | uncharacterized LOC108350876 | | 4 | 150306396 | 150319990 | Rat | n/a | Region | gene |
| 556 | 11081189 | Nup50-ps1 | nucleoporin 50, pseudogene 1 | | 4 | 128787567 | 128789296 | Rat | n/a | Region | gene |
| 555 | 11469179 | LOC108350740 | uncharacterized LOC108350740 | | 4 | 134210738 | 134238146 | Rat | n/a | Region | gene |
| 554 | 11358358 | LOC108350743 | uncharacterized LOC108350743 | | 4 | 143321781 | 143331269 | Rat | n/a | Region | gene |
| 553 | 11437638 | LOC108350722 | 60S ribosomal protein L27 pseudogene | | 4 | 116278373 | 116281125 | Rat | n/a | Region | gene |
| 552 | 11370866 | LOC108350753 | uncharacterized LOC108350753 | | 4 | 153846873 | 153873689 | Rat | n/a | Region | gene |
| 551 | 11450202 | LOC108350756 | uncharacterized LOC108350756 | | 4 | 155137257 | 155149163 | Rat | n/a | Region | gene |
| 550 | 11453896 | LOC108350755 | thymosin beta-10 pseudogene | | 4 | 155001910 | 155003394 | Rat | n/a | Region | gene |
| 549 | 11421296 | LOC108350869 | 60S ribosomal protein L31 pseudogene | | 4 | 116921291 | 116921723 | Rat | n/a | Region | gene |
| 548 | 11384346 | Rpl9-ps19 | ribosomal protein L9, pseudogene 19 | | 4 | 149309307 | 149310333 | Rat | n/a | Region | gene |
| 547 | 11398915 | Trnal-aag2 | transfer RNA leucine (anticodon AAG) 2 | | 4 | 127454175 | 127454256 | Rat | n/a | Region | gene |
| 546 | 11410861 | Rps11-ps14 | ribosomal protein S11, pseudogene 14 | | 4 | 124395855 | 124398410 | Rat | n/a | Region | gene |
| 545 | 11400916 | LOC108350874 | uncharacterized LOC108350874 | | 4 | 141940905 | 141942281 | Rat | n/a | Region | gene |
| 544 | 11379695 | LOC108350752 | 60S ribosomal protein L17 pseudogene | | 4 | 151573137 | 151573717 | Rat | n/a | Region | gene |
| 543 | 11380647 | LOC108350745 | uncharacterized LOC108350745 | | 4 | 147262869 | 147277704 | Rat | n/a | Region | gene |
| 542 | 11380835 | LOC108350738 | uncharacterized LOC108350738 | | 4 | 132797064 | 132799375 | Rat | n/a | Region | gene |
| 541 | 11502286 | LOC108350725 | uncharacterized LOC108350725 | | 4 | 118778620 | 118792730 | Rat | n/a | Region | gene |
| 540 | 11479425 | Alg11-ps1 | ALG11, alpha-1,2-mannosyltransferase, pseudogene 1 | | 4 | 139862203 | 139863619 | Rat | n/a | Region | gene |
| 539 | 11480110 | LOC108350739 | uncharacterized LOC108350739 | | 4 | 133581761 | 133598613 | Rat | n/a | Region | gene |
| 538 | 11508600 | Trnag-ccc4 | transfer RNA glycine (anticodon CCC) 4 | | 4 | 118852419 | 118852489 | Rat | n/a | Region | gene |
| 537 | 11484912 | Rpl30-ps10 | ribosomal protein L30, pseudogene 10 | | 4 | 135972768 | 135975698 | Rat | n/a | Region | gene |
| 536 | 11518313 | LOC108350719 | uncharacterized LOC108350719 | | 4 | 115639631 | 115642945 | Rat | n/a | Region | gene |
| 535 | 11488278 | LOC108350721 | uncharacterized LOC108350721 | | 4 | 116211039 | 116218830 | Rat | n/a | Region | gene |
| 534 | 11488957 | Trnaa-agc5 | transfer RNA alanine (anticodon AGC) 5 | | 4 | 155610386 | 155610452 | Rat | n/a | Region | gene |
| 533 | 11489696 | Trnac-gca29 | transfer RNA cysteine (anticodon GCA) 29 | | 4 | 149848557 | 149848628 | Rat | n/a | Region | gene |
| 532 | 41354715 | LOC120102371 | uncharacterized LOC120102371 | | 4 | 150423574 | 150431401 | Rat | n/a | Region | gene |
| 531 | 41166952 | LOC120102316 | uncharacterized LOC120102316 | | 4 | 115098139 | 115106023 | Rat | n/a | Region | gene |
| 530 | 41167200 | Vom1r114 | vomeronasal 1 receptor 1134 | | 4 | 122679045 | 122680064 | Rat | n/a | Region | gene |
| 529 | 41203173 | LOC120102365 | uncharacterized LOC120102365 | | 4 | 147065997 | 147066964 | Rat | n/a | Region | gene |
| 528 | 41234562 | LOC120102340 | uncharacterized LOC120102340 | | 4 | 121723881 | 121732860 | Rat | n/a | Region | gene |
| 527 | 41282493 | LOC120102708 | small nucleolar RNA SNORA17 | | 4 | 117652870 | 117652993 | Rat | n/a | Region | gene |
| 526 | 41323577 | LOC120102314 | uncharacterized LOC120102314 | | 4 | 111407391 | 111454991 | Rat | n/a | Region | gene |
| 525 | 41355210 | LOC120102710 | small nucleolar RNA SNORA17 | | 4 | 123361345 | 123361441 | Rat | n/a | Region | gene |
| 524 | 41205097 | Trnaa-agc80 | transfer RNA alanine (anticodon AGC) 80 | | 4 | 153468859 | 153468931 | Rat | n/a | Region | gene |
| 523 | 41382729 | LOC120102366 | uncharacterized LOC120102366 | | 4 | 147575390 | 147578136 | Rat | n/a | Region | gene |
| 522 | 41383162 | LOC120102335 | uncharacterized LOC120102335 | | 4 | 120733062 | 120737659 | Rat | n/a | Region | gene |
| 521 | 41140809 | LOC120102666 | small nucleolar RNA SNORA17 | | 4 | 133135428 | 133135559 | Rat | n/a | Region | gene |
| 520 | 41284758 | Trnas-aga13 | transfer RNA serine (anticodon AGA) 13 | | 4 | 140797732 | 140797813 | Rat | n/a | Region | gene |
| 519 | 41359859 | LOC120102324 | uncharacterized LOC120102324 | | 4 | 117723370 | 117725707 | Rat | n/a | Region | gene |
| 518 | 41091722 | LOC120102670 | small nucleolar RNA SNORA17 | | 4 | 125861717 | 125861845 | Rat | n/a | Region | gene |
| 517 | 41146337 | LOC120102364 | uncharacterized LOC120102364 | | 4 | 146787484 | 146795910 | Rat | n/a | Region | gene |
| 516 | 41327928 | Rnu6-433 | RNA, U6 small nuclear 433 | | 4 | 131099002 | 131099108 | Rat | n/a | Region | gene |
| 515 | 41361992 | LOC120102607 | U6 spliceosomal RNA | | 4 | 135562032 | 135562145 | Rat | n/a | Region | gene |
| 514 | 41388537 | LOC120102326 | uncharacterized LOC120102326 | | 4 | 118416642 | 118424029 | Rat | n/a | Region | gene |
| 513 | 41093674 | LOC120102354 | uncharacterized LOC120102354 | | 4 | 133142571 | 133164384 | Rat | n/a | Region | gene |
| 512 | 41146352 | LOC120102380 | small ubiquitin-related modifier 1-like | | 4 | 155619960 | 155620555 | Rat | n/a | Region | gene |
| 511 | 41096242 | LOC120102774 | U4 spliceosomal RNA | | 4 | 151638871 | 151639012 | Rat | n/a | Region | gene |
| 510 | 41120855 | LOC120102337 | uncharacterized LOC120102337 | | 4 | 121604758 | 121615075 | Rat | n/a | Region | gene |
| 509 | 41120875 | Cox7c-ps3 | Cytochrome c oxidase subunit 7C, pseudogene 3 | | 4 | 155783930 | 155785243 | Rat | n/a | Region | gene |
| 508 | 41188358 | LOC120102768 | U2 spliceosomal RNA | | 4 | 150054525 | 150054694 | Rat | n/a | Region | gene |
| 507 | 41261845 | LOC120102369 | uncharacterized LOC120102369 | | 4 | 147944627 | 147947997 | Rat | n/a | Region | gene |
| 506 | 41262491 | LOC120102350 | uncharacterized LOC120102350 | | 4 | 132559007 | 132560324 | Rat | n/a | Region | gene |
| 505 | 41096961 | LOC120102643 | small nucleolar RNA SNORA51 | | 4 | 111475412 | 111475543 | Rat | n/a | Region | gene |
| 504 | 41121481 | Trnap-ggg3 | transfer RNA proline (anticodon GGG) 3 | | 4 | 149560503 | 149560583 | Rat | n/a | Region | gene |
| 503 | 41121964 | Cox6c-ps3 | cytochrome c oxidase subunit 6C, pseudogene 3 | | 4 | 127416018 | 127417910 | Rat | n/a | Region | gene |
| 502 | 41150042 | LOC120102331 | uncharacterized LOC120102331 | | 4 | 120353804 | 120366389 | Rat | n/a | Region | gene |
| 501 | 41150073 | LOC120102639 | small nucleolar RNA SNORA2/SNORA34 family | | 4 | 118815877 | 118816012 | Rat | n/a | Region | gene |
| 500 | 41153665 | LOC120102642 | small nucleolar RNA SNORA29 | | 4 | 120707367 | 120707503 | Rat | n/a | Region | gene |
| 499 | 41178684 | Prune2-ps1 | prune homolog 2 with BCH domain, pseudogene 1 | | 4 | 130327921 | 130328679 | Rat | n/a | Region | gene |
| 498 | 41263255 | LOC120102348 | uncharacterized LOC120102348 | | 4 | 129815657 | 129821673 | Rat | n/a | Region | gene |
| 497 | 41392789 | C4h9orf85 | similar to human chromosome 9 open reading frame 85 | | 4 | 150205867 | 150206875 | Rat | n/a | Region | gene |
| 496 | 41393297 | Trnap-agg26 | transfer RNA proline (anticodon AGG) 26 | | 4 | 146300941 | 146301014 | Rat | n/a | Region | gene |
| 495 | 41180729 | LOC120102601 | U6 spliceosomal RNA | | 4 | 144143261 | 144143356 | Rat | n/a | Region | gene |
| 494 | 41394821 | LOC120102171 | uncharacterized LOC120102171 | | 4 | 126995970 | 126999766 | Rat | n/a | Region | gene |
| 493 | 41216201 | LOC120102586 | U6 spliceosomal RNA | | 4 | 146200474 | 146200580 | Rat | n/a | Region | gene |
| 492 | 41288887 | LOC120102344 | uncharacterized LOC120102344 | | 4 | 125657909 | 125684813 | Rat | n/a | Region | gene |
| 491 | 41344928 | LOC120102718 | small nucleolar RNA SNORA17 | | 4 | 137032326 | 137032442 | Rat | n/a | Region | gene |
| 490 | 41126171 | LOC120102771 | small nucleolar RNA U3 | | 4 | 132053395 | 132053495 | Rat | n/a | Region | gene |
| 489 | 41158046 | LOC120102501 | uncharacterized LOC120102501 | | 4 | 139283893 | 139296350 | Rat | n/a | Region | gene |
| 488 | 41070385 | Snora44 | small nucleolar RNA, H/ACA box 44 | | 4 | 126415989 | 126416119 | Rat | n/a | Region | gene |
| 487 | 41070524 | C18h18orf32-ps1 | similar to human chromosome 18 open reading frame 32, pseudogene 1 | | 4 | 133734357 | 133734611 | Rat | n/a | Region | gene |
| 486 | 41102695 | LOC120102611 | U7 small nuclear RNA | | 4 | 136623724 | 136623786 | Rat | n/a | Region | gene |
| 485 | 41127226 | LOC120102641 | small Cajal body-specific RNA 16 | | 4 | 135361243 | 135361421 | Rat | n/a | Region | gene |
| 484 | 41127828 | LOC120102339 | uncharacterized LOC120102339 | | 4 | 121701048 | 121712111 | Rat | n/a | Region | gene |
| 483 | 41159196 | LOC120102709 | small nucleolar RNA SNORA17 | | 4 | 111773083 | 111773205 | Rat | n/a | Region | gene |
| 482 | 41195793 | LOC120102315 | uncharacterized LOC120102315 | | 4 | 113504541 | 113533897 | Rat | n/a | Region | gene |
| 481 | 41196182 | LOC120102769 | small nucleolar RNA U3 | | 4 | 146088309 | 146088519 | Rat | n/a | Region | gene |
| 480 | 41219320 | LOC120102505 | cyclin-dependent kinases regulatory subunit 2-like | | 4 | 144220612 | 144220990 | Rat | n/a | Region | gene |
| 479 | 41270105 | LOC120102319 | uncharacterized LOC120102319 | | 4 | 115515273 | 115521277 | Rat | n/a | Region | gene |
| 478 | 41291607 | LOC120102330 | uncharacterized LOC120102330 | | 4 | 120086931 | 120112957 | Rat | n/a | Region | gene |
| 477 | 41347889 | LOC120102660 | small nucleolar RNA SNORA17 | | 4 | 151283431 | 151283559 | Rat | n/a | Region | gene |
| 476 | 41348576 | LOC120102637 | small nucleolar RNA SNORA7 | | 4 | 148866843 | 148866982 | Rat | n/a | Region | gene |
| 475 | 41372663 | LOC120102573 | U6 spliceosomal RNA | | 4 | 139689094 | 139689204 | Rat | n/a | Region | gene |
| 474 | 41072523 | LOC120102179 | uncharacterized LOC120102179 | | 4 | 136171929 | 136192655 | Rat | n/a | Region | gene |
| 473 | 41105292 | Trnal-aag13 | transfer RNA leucine (anticodon AAG) 13 | | 4 | 153529208 | 153529282 | Rat | n/a | Region | gene |
| 472 | 41129602 | LOC120102669 | small nucleolar RNA SNORA17 | | 4 | 117587214 | 117587345 | Rat | n/a | Region | gene |
| 471 | 41161074 | LOC120102320 | uncharacterized LOC120102320 | | 4 | 116014672 | 116016904 | Rat | n/a | Region | gene |
| 470 | 41349825 | Rpl23-ps8 | ribosomal protein L23,pseudogene 8 | | 4 | 115616374 | 115621512 | Rat | n/a | Region | gene |
| 469 | 41374913 | LOC120102638 | small nucleolar RNA SNORA2/SNORA34 family | | 4 | 119234751 | 119234887 | Rat | n/a | Region | gene |
| 468 | 41401598 | LOC120102374 | uncharacterized LOC120102374 | | 4 | 150988154 | 150999023 | Rat | n/a | Region | gene |
| 467 | 41162659 | Actg1-ps9 | actin, gamma 1, pseudogene 9 | | 4 | 133306869 | 133313492 | Rat | n/a | Region | gene |
| 466 | 41162732 | LOC120102317 | uncharacterized LOC120102317 | | 4 | 115217376 | 115228513 | Rat | n/a | Region | gene |
| 465 | 41162866 | Trnat-agu30 | transfer RNA threonine (anticodon AGU) 30 | | 4 | 126353506 | 126353587 | Rat | n/a | Region | gene |
| 464 | 41163084 | LOC120102358 | uncharacterized LOC120102358 | | 4 | 133818078 | 133839199 | Rat | n/a | Region | gene |
| 463 | 41199103 | Trnav-aac19 | transfer RNA valine (anticodon AAC) 19 | | 4 | 121218174 | 121218246 | Rat | n/a | Region | gene |
| 462 | 41351198 | LOC120102180 | uncharacterized LOC120102180 | | 4 | 136636923 | 136641514 | Rat | n/a | Region | gene |
| 461 | 41351797 | LOC120102672 | small nucleolar RNA SNORA17 | | 4 | 150004608 | 150004742 | Rat | n/a | Region | gene |
| 460 | 41376499 | LOC120102333 | uncharacterized LOC120102333 | | 4 | 120648227 | 120658210 | Rat | n/a | Region | gene |
| 459 | 41402055 | LOC120102752 | U2 spliceosomal RNA | | 4 | 146594912 | 146595102 | Rat | n/a | Region | gene |
| 458 | 41402798 | LOC120102332 | uncharacterized LOC120102332 | | 4 | 120567736 | 120572576 | Rat | n/a | Region | gene |
| 457 | 41403052 | LOC120102750 | U2 spliceosomal RNA | | 4 | 146511607 | 146511797 | Rat | n/a | Region | gene |
| 456 | 41132129 | Gabarap-ps3 | GABA type A receptor-associated protein, pseudogene 3 | | 4 | 126518341 | 126548868 | Rat | n/a | Region | gene |
| 455 | 41200685 | LOC120102325 | uncharacterized LOC120102325 | | 4 | 118176974 | 118190926 | Rat | n/a | Region | gene |
| 454 | 41352693 | LOC120102755 | U2 spliceosomal RNA | | 4 | 134969601 | 134969762 | Rat | n/a | Region | gene |
| 453 | 41109424 | LOC120102372 | uncharacterized LOC120102372 | | 4 | 150812902 | 150819415 | Rat | n/a | Region | gene |
| 452 | 41166573 | Snu13-ps2 | small nuclear ribonucleoprotein 13, pseudogene 2 | | 4 | 144510658 | 144511761 | Rat | n/a | Region | gene |
| 451 | 41233243 | LOC120102174 | macrophage migration inhibitory factor-like | | 4 | 132485219 | 132485730 | Rat | n/a | Region | gene |
| 450 | 41233693 | LOC120102633 | small nucleolar RNA SNORA5 | | 4 | 116471399 | 116471527 | Rat | n/a | Region | gene |
| 449 | 40972096 | LOC120102367 | endogenous retrovirus group K member 21 Env polyprotein-like | | 4 | 147699712 | 147708407 | Rat | n/a | Region | gene |
| 448 | 40972357 | LOC120102677 | small nucleolar RNA SNORA17 | | 4 | 114390354 | 114390483 | Rat | n/a | Region | gene |
| 447 | 41011708 | LOC120102630 | small nucleolar RNA SNORA36 family | | 4 | 129770615 | 129770745 | Rat | n/a | Region | gene |
| 446 | 40949626 | LOC120102500 | uncharacterized LOC120102500 | | 4 | 129086996 | 129146558 | Rat | n/a | Region | gene |
| 445 | 41340890 | LOC120102373 | uncharacterized LOC120102373 | | 4 | 150943127 | 150952907 | Rat | n/a | Region | gene |
| 444 | 41340927 | LOC120102746 | small nucleolar RNA U13 | | 4 | 117499018 | 117499122 | Rat | n/a | Region | gene |
| 443 | 40976786 | LOC120102649 | small nucleolar RNA SNORA48 | | 4 | 150527373 | 150527515 | Rat | n/a | Region | gene |
| 442 | 40953411 | LOC120102343 | uncharacterized LOC120102343 | | 4 | 125386934 | 125418673 | Rat | n/a | Region | gene |
| 441 | 40978413 | LOC120102509 | uncharacterized LOC120102509 | | 4 | 154458546 | 154471554 | Rat | n/a | Region | gene |
| 440 | 40955934 | LOC120102329 | uncharacterized LOC120102329 | | 4 | 119717819 | 119729211 | Rat | n/a | Region | gene |
| 439 | 40980164 | LOC120102351 | RING1 and YY1 binding protein | | 4 | 132876260 | 132929075 | Rat | n/a | Region | gene |
| 438 | 41002253 | LOC120102730 | small nucleolar RNA SNORA17 | | 4 | 148787387 | 148787491 | Rat | n/a | Region | gene |
| 437 | 40930702 | LOC120102497 | uncharacterized LOC120102497 | | 4 | 126723866 | 126732961 | Rat | n/a | Region | gene |
| 436 | 40983794 | LOC120102360 | uncharacterized LOC120102360 | | 4 | 138620225 | 138624508 | Rat | n/a | Region | gene |
| 435 | 40959422 | LOC120102757 | U2 spliceosomal RNA | | 4 | 152575725 | 152575876 | Rat | n/a | Region | gene |
| 434 | 41004547 | LOC120102499 | uncharacterized LOC120102499 | | 4 | 129197518 | 129420528 | Rat | n/a | Region | gene |
| 433 | 40934392 | LOC120102689 | small nucleolar RNA SNORA17 | | 4 | 140680625 | 140680738 | Rat | n/a | Region | gene |
| 432 | 40986091 | Timm23-ps6 | translocase of inner mitochondrial membrane 23, pseudogene 6 | | 4 | 152877093 | 152878119 | Rat | n/a | Region | gene |
| 431 | 41009709 | LOC120102711 | small nucleolar RNA SNORA17 | | 4 | 117685079 | 117685209 | Rat | n/a | Region | gene |
| 430 | 40993191 | LOC120102703 | small nucleolar RNA SNORA17 | | 4 | 126026597 | 126026707 | Rat | n/a | Region | gene |
| 429 | 40943387 | LOC120102178 | uncharacterized LOC120102178 | | 4 | 135763696 | 135765816 | Rat | n/a | Region | gene |
| 428 | 40996046 | LOC120102553 | U4 spliceosomal RNA | | 4 | 142973965 | 142974049 | Rat | n/a | Region | gene |
| 427 | 41024371 | LOC120102557 | U4 spliceosomal RNA | | 4 | 155771670 | 155771782 | Rat | n/a | Region | gene |
| 426 | 41024974 | LOC120102352 | uncharacterized LOC120102352 | | 4 | 133042414 | 133050061 | Rat | n/a | Region | gene |
| 425 | 41314095 | LOC120102353 | uncharacterized LOC120102353 | | 4 | 133100432 | 133108825 | Rat | n/a | Region | gene |
| 424 | 41025378 | LOC120102338 | uncharacterized LOC120102338 | | 4 | 121690045 | 121700753 | Rat | n/a | Region | gene |
| 423 | 41078896 | LOC120102377 | uncharacterized LOC120102377 | | 4 | 153055775 | 153064184 | Rat | n/a | Region | gene |
| 422 | 41246146 | LOC120102361 | uncharacterized LOC120102361 | | 4 | 141728281 | 141747563 | Rat | n/a | Region | gene |
| 421 | 41246601 | LOC120102177 | uncharacterized LOC120102177 | | 4 | 134335166 | 134338245 | Rat | n/a | Region | gene |
| 420 | 41080233 | Gapdh-ps70 | Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 70 | | 4 | 116161930 | 116162927 | Rat | n/a | Region | gene |
| 419 | 41247159 | LOC120102502 | uncharacterized LOC120102502 | | 4 | 139299748 | 139305639 | Rat | n/a | Region | gene |
| 418 | 41332887 | Trnaa-agc42 | transfer RNA alanine (anticodon AGC) 42 | | 4 | 148841925 | 148842005 | Rat | n/a | Region | gene |
| 417 | 41053760 | LOC120102356 | uncharacterized LOC120102356 | | 4 | 133648139 | 133660193 | Rat | n/a | Region | gene |
| 416 | 41143089 | LOC120102740 | small nucleolar RNA SNORA76 | | 4 | 148319434 | 148319561 | Rat | n/a | Region | gene |
| 415 | 41152310 | LOC120102555 | U4 spliceosomal RNA | | 4 | 116423166 | 116423314 | Rat | n/a | Region | gene |
| 414 | 41257949 | LOC120102328 | uncharacterized LOC120102328 | | 4 | 119415816 | 119417839 | Rat | n/a | Region | gene |
| 413 | 41335347 | Rnu6-131 | RNA, U6 small nuclear 131 | | 4 | 129166306 | 129166407 | Rat | n/a | Region | gene |
| 412 | 41317445 | LOC120102593 | U6 spliceosomal RNA | | 4 | 144668340 | 144668444 | Rat | n/a | Region | gene |
| 411 | 41317950 | LOC120102724 | small nucleolar RNA SNORA17 | | 4 | 130392379 | 130392510 | Rat | n/a | Region | gene |
| 410 | 41223619 | LOC120102503 | uncharacterized LOC120102503 | | 4 | 138789618 | 138794102 | Rat | n/a | Region | gene |
| 409 | 41299916 | LOC120102588 | U6 spliceosomal RNA | | 4 | 152565797 | 152565884 | Rat | n/a | Region | gene |
| 408 | 41337025 | LOC120102349 | uncharacterized LOC120102349 | | 4 | 132466966 | 132473095 | Rat | n/a | Region | gene |
| 407 | 41036133 | LOC120102375 | uncharacterized LOC120102375 | | 4 | 151066816 | 151075877 | Rat | n/a | Region | gene |
| 406 | 41227538 | LOC120102655 | small nucleolar RNA SNORA48 | | 4 | 121944388 | 121944517 | Rat | n/a | Region | gene |
| 405 | 41016825 | LOC120102376 | uncharacterized LOC120102376 | | 4 | 151176337 | 151179656 | Rat | n/a | Region | gene |
| 404 | 41016841 | LOC120102668 | U1 spliceosomal RNA | | 4 | 111394809 | 111394970 | Rat | n/a | Region | gene |
| 403 | 41017193 | LOC120102762 | U2 spliceosomal RNA | | 4 | 142280446 | 142280654 | Rat | n/a | Region | gene |
| 402 | 41039995 | LOC120102368 | uncharacterized LOC120102368 | | 4 | 147735944 | 147739532 | Rat | n/a | Region | gene |
| 401 | 41066235 | Eef1a1-ps16 | eukaryotic translation elongation factor 1 alpha 1, pseudogene 16 | | 4 | 145130360 | 145132187 | Rat | n/a | Region | gene |
| 400 | 41018082 | LOC120102321 | uncharacterized LOC120102321 | | 4 | 116080648 | 116105711 | Rat | n/a | Region | gene |
| 399 | 41018384 | Psmb3-ps2 | proteasome 20S subunit beta 3, pseudogene 2 | | 4 | 127536885 | 127537501 | Rat | n/a | Region | gene |
| 398 | 41240645 | LOC120102176 | uncharacterized LOC120102176 | | 4 | 134072462 | 134077268 | Rat | n/a | Region | gene |