| 1000 | 1307865 | Prex2 | phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 | | 5 | 7937692 | 8253112 | Rat | n/a | Region | gene |
| 999 | 11502483 | LOC108350922 | uncharacterized LOC108350922 | | 5 | 8380875 | 8383459 | Rat | n/a | Region | gene |
| 998 | 11366818 | Rpl30-ps4 | ribosomal protein L30, pseudogene 4 | | 5 | 8420461 | 8420804 | Rat | n/a | Region | gene |
| 997 | 1311764 | Cpa6 | carboxypeptidase A6 | | 5 | 8526708 | 8888492 | Rat | n/a | Region | gene |
| 996 | 1560793 | Arfgef1 | ADP ribosylation factor guanine nucleotide exchange factor 1 | | 5 | 8982061 | 9076326 | Rat | n/a | Region | gene |
| 995 | 1307055 | Cspp1 | centrosome and spindle pole associated protein 1 | | 5 | 9077161 | 9192402 | Rat | n/a | Region | gene |
| 994 | 1310301 | Cops5 | COP9 signalosome subunit 5 | | 5 | 9192233 | 9210498 | Rat | n/a | Region | gene |
| 993 | 40943670 | Rnu6-1297 | RNA, U6 small nuclear 1297 | | 5 | 9226301 | 9226401 | Rat | n/a | Region | gene |
| 992 | 1585679 | Ppp1r42 | protein phosphatase 1, regulatory subunit 42 | | 5 | 9227109 | 9274461 | Rat | n/a | Region | gene |
| 991 | 1589398 | Tcf24 | transcription factor 24 | | 5 | 9274659 | 9282876 | Rat | n/a | Region | gene |
| 990 | 1561068 | Mcmdc2 | minichromosome maintenance domain containing 2 | | 5 | 9291967 | 9337526 | Rat | n/a | Region | gene |
| 989 | 7721328 | LOC102556004 | uncharacterized LOC102556004 | | 5 | 9296084 | 9316974 | Rat | n/a | Region | gene |
| 988 | 41182145 | Snord87 | small nucleolar RNA, C/D box 87 | | 5 | 9297489 | 9297573 | Rat | n/a | Region | gene |
| 987 | 620242 | Sgk3 | serum/glucocorticoid regulated kinase family, member 3 | | 5 | 9345761 | 9472243 | Rat | n/a | Region | gene |
| 986 | 1586147 | Eef1g-ps4 | eukaryotic translation elongation factor 1 gamma, pseudogene 4 | | 5 | 9498761 | 9503171 | Rat | n/a | Region | gene |
| 985 | 708520 | Vcpip1 | valosin containing protein interacting protein 1 | | 5 | 9534247 | 9560889 | Rat | n/a | Region | gene |
| 984 | 1306940 | Mybl1 | MYB proto-oncogene like 1 | | 5 | 9582905 | 9618179 | Rat | n/a | Region | gene |
| 983 | 1561849 | Vxn | vexin | | 5 | 9659213 | 9684684 | Rat | n/a | Region | gene |
| 982 | 1308863 | Adhfe1 | alcohol dehydrogenase, iron containing, 1 | | 5 | 9705966 | 9732580 | Rat | n/a | Region | gene |
| 981 | 1311403 | Rrs1 | ribosome biogenesis regulator 1 homolog | | 5 | 9733486 | 9735119 | Rat | n/a | Region | gene |
| 980 | 1560290 | Sntg1 | syntrophin, gamma 1 | | 5 | 9980550 | 10794666 | Rat | n/a | Region | gene |
| 979 | 1585836 | Tra2a-ps3 | transformer 2 alpha, pseudogene 3 | | 5 | 10106642 | 10108431 | Rat | n/a | Region | gene |
| 978 | 40974341 | LOC120103228 | U6 spliceosomal RNA | | 5 | 10263087 | 10263191 | Rat | n/a | Region | gene |
| 977 | 1584848 | Hnrnpa1-ps5 | heterogeneous nuclear ribonucleoprotein A1, pseudogene 5 | | 5 | 10855912 | 10856695 | Rat | n/a | Region | gene |
| 976 | 1585792 | Kif1c-ps1 | kinesin family member 1C, pseudogene 1 | | 5 | 10906161 | 10908936 | Rat | n/a | Region | gene |
| 975 | 2318732 | Ago2-ps1 | argonaute RISC catalytic component 2, pseudogene 1 | | 5 | 11020549 | 11023395 | Rat | n/a | Region | gene |
| 974 | 41091925 | Hnrnpa1-ps48 | heterogeneous nuclear ribonucleoprotein A1, pseudogene 48 | | 5 | 11433476 | 11439810 | Rat | n/a | Region | gene |
| 973 | 9452275 | LOC103692281 | BET1 homolog pseudogene | | 5 | 11670721 | 11671079 | Rat | n/a | Region | gene |
| 972 | 41098563 | Pramel7-ps2 | preferentially expressed antigen in melanoma-like 7, pseudogene 2 | | 5 | 11831037 | 11832415 | Rat | n/a | Region | gene |
| 971 | 1598345 | Got2-ps2 | glutamic-oxaloacetic transaminase 2, pseudogene 2 | | 5 | 12215329 | 12216562 | Rat | n/a | Region | gene |
| 970 | 41186497 | LOC120102811 | uncharacterized LOC120102811 | | 5 | 12249798 | 12254124 | Rat | n/a | Region | gene |
| 969 | 1586096 | Pcmtd1 | protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 | | 5 | 12284711 | 12355680 | Rat | n/a | Region | gene |
| 968 | 2318359 | Tiprl-ps2 | TOR signaling pathway regulator, pseudogene 2 | | 5 | 12454879 | 12455761 | Rat | n/a | Region | gene |
| 967 | 6494602 | Rps15-ps4 | ribosomal protein S15, pseudogene 4 | | 5 | 12457780 | 12458197 | Rat | n/a | Region | gene |
| 966 | 1564095 | Rplp2l1 | ribosomal protein lateral stalk subunit P2 like 1 | | 5 | 12551287 | 12552204 | Rat | n/a | Region | gene |
| 965 | 708566 | St18 | ST18 C2H2C-type zinc finger transcription factor | | 5 | 12582493 | 12914221 | Rat | n/a | Region | gene |
| 964 | 1583530 | Alkal1 | ALK and LTK ligand 1 | | 5 | 13019729 | 13049913 | Rat | n/a | Region | gene |
| 963 | 1309346 | Rb1cc1 | RB1-inducible coiled-coil 1 | | 5 | 13161648 | 13225560 | Rat | n/a | Region | gene |
| 962 | 41038477 | LOC120103270 | small nucleolar RNA SNORA8 | | 5 | 13214646 | 13214785 | Rat | n/a | Region | gene |
| 961 | 7618446 | LOC102549737 | uncharacterized LOC102549737 | | 5 | 13250441 | 13272830 | Rat | n/a | Region | gene |
| 960 | 41008049 | LOC120102812 | uncharacterized LOC120102812 | | 5 | 13329424 | 13361574 | Rat | n/a | Region | gene |
| 959 | 1305917 | Npbwr1 | neuropeptides B and W receptor 1 | | 5 | 13495319 | 13498761 | Rat | n/a | Region | gene |
| 958 | 1586095 | Psmd12-ps1 | proteasome 26S subunit, non-ATPase 12, pseudogene 1 | | 5 | 13626241 | 13708195 | Rat | n/a | Region | gene |
| 957 | 69426 | Oprk1 | opioid receptor, kappa 1 | | 5 | 13860016 | 13877823 | Rat | n/a | Region | gene |
| 956 | 2318103 | Nhp2-ps2 | NHP2 ribonucleoprotein, pseudogene 2 | | 5 | 13924852 | 14056332 | Rat | n/a | Region | gene |
| 955 | 11385100 | LOC108350923 | uncharacterized LOC108350923 | | 5 | 14307302 | 14312194 | Rat | n/a | Region | gene |
| 954 | 1562450 | Atp6v1h | ATPase H+ transporting V1 subunit H | | 5 | 14379029 | 14484703 | Rat | n/a | Region | gene |
| 953 | 41108305 | Hspd1-ps36 | heat shock protein family D (Hsp60) member 1, pseudogene 36 | | 5 | 14497996 | 14499931 | Rat | n/a | Region | gene |
| 952 | 1309880 | Tcea1 | transcription elongation factor A1 | | 5 | 14631454 | 14668769 | Rat | n/a | Region | gene |
| 951 | 3025 | Lypla1 | lysophospholipase 1 | | 5 | 14679605 | 14708774 | Rat | n/a | Region | gene |
| 950 | 1304796 | Mrpl15 | mitochondrial ribosomal protein L15 | | 5 | 14729961 | 14741276 | Rat | n/a | Region | gene |
| 949 | 7637993 | LOC102552817 | uncharacterized LOC102552817 | | 5 | 14971608 | 15016234 | Rat | n/a | Region | gene |
| 948 | 41121936 | LOC120102814 | uncharacterized LOC120102814 | | 5 | 14972134 | 14983916 | Rat | n/a | Region | gene |
| 947 | 1305371 | Sox17 | SRY-box transcription factor 17 | | 5 | 15016660 | 15022228 | Rat | n/a | Region | gene |
| 946 | 1595256 | Sumo4 | small ubiquitin-like modifier 4 | | 5 | 15099320 | 15100304 | Rat | n/a | Region | gene |
| 945 | 1596713 | Rp1 | RP1, axonemal microtubule associated | | 5 | 15121104 | 15582363 | Rat | n/a | Region | gene |
| 944 | 1565647 | Cyld-ps1 | CYLD lysine 63 deubiquitinase, pseudogene 1 | | 5 | 15202074 | 15205290 | Rat | n/a | Region | gene |
| 943 | 41001063 | LOC120103384 | U6 spliceosomal RNA | | 5 | 15375422 | 15375528 | Rat | n/a | Region | gene |
| 942 | 1549780 | Xkr4 | XK related 4 | | 5 | 15896818 | 16297733 | Rat | n/a | Region | gene |
| 941 | 9323738 | LOC103695237 | uncharacterized LOC103695237 | | 5 | 16192887 | 16195997 | Rat | n/a | Region | gene |
| 940 | 41395404 | LOC120103059 | uncharacterized LOC120103059 | | 5 | 16284001 | 16429252 | Rat | n/a | Region | gene |
| 939 | 1309006 | Tmem68 | transmembrane protein 68 | | 5 | 16494054 | 16524842 | Rat | n/a | Region | gene |
| 938 | 1309953 | Tgs1 | trimethylguanosine synthase 1 | | 5 | 16524864 | 16558399 | Rat | n/a | Region | gene |
| 937 | 1564981 | Scp2-ps1 | sterol carrier protein 2, pseudogene 1 | | 5 | 16608595 | 16609025 | Rat | n/a | Region | gene |
| 936 | 621017 | Lyn | LYN proto-oncogene, Src family tyrosine kinase | | 5 | 16639512 | 16755501 | Rat | n/a | Region | gene |
| 935 | 621037 | Rps20 | ribosomal protein S20 | | 5 | 16819095 | 16820476 | Rat | n/a | Region | gene |
| 934 | 41164745 | Snord54 | small nucleolar RNA, C/D box 54 | | 5 | 16819945 | 16820012 | Rat | n/a | Region | gene |
| 933 | 41390808 | LOC120103319 | small nucleolar RNA SNORA17 | | 5 | 16845762 | 16845890 | Rat | n/a | Region | gene |
| 932 | 3103 | Mos | MOS proto-oncogene, serine/threonine kinase | | 5 | 16859957 | 16861264 | Rat | n/a | Region | gene |
| 931 | 1597763 | Dnajb6-ps2 | DnaJ heat shock protein family (Hsp40) member B6, pseudogene 2 | | 5 | 16878848 | 16879742 | Rat | n/a | Region | gene |
| 930 | 2321393 | Rpl19l4 | ribosomal protein L19 like 4 | | 5 | 16880899 | 16898782 | Rat | n/a | Region | gene |
| 929 | 1305286 | Plag1 | PLAG1 zinc finger | | 5 | 16902057 | 16956727 | Rat | n/a | Region | gene |
| 928 | 1592689 | Chchd7 | coiled-coil-helix-coiled-coil-helix domain containing 7 | | 5 | 16957127 | 16961682 | Rat | n/a | Region | gene |
| 927 | 1565999 | Sdr16c5 | short chain dehydrogenase/reductase family 16C, member 5 | | 5 | 17018813 | 17043974 | Rat | n/a | Region | gene |
| 926 | 1562060 | Sdr16c6 | short chain dehydrogenase/reductase family 16C, member 6 | | 5 | 17095208 | 17118713 | Rat | n/a | Region | gene |
| 925 | 68946 | Penk | proenkephalin | | 5 | 17183799 | 17189160 | Rat | n/a | Region | gene |
| 924 | 6486737 | LOC100912510 | uncharacterized LOC100912510 | | 5 | 17190414 | 17192458 | Rat | n/a | Region | gene |
| 923 | 1563405 | Ptp4a2l1 | protein tyrosine phosphatase 4A2 like 1 | | 5 | 17530517 | 17532146 | Rat | n/a | Region | gene |
| 922 | 41025792 | LOC120102816 | uncharacterized LOC120102816 | | 5 | 17690691 | 17736386 | Rat | n/a | Region | gene |
| 921 | 41052978 | LOC120103297 | small nucleolar RNA SNORA17 | | 5 | 17735914 | 17736044 | Rat | n/a | Region | gene |
| 920 | 1306455 | Bpnt2 | 3'(2'), 5'-bisphosphate nucleotidase 2 | | 5 | 17775684 | 17802570 | Rat | n/a | Region | gene |
| 919 | 1596418 | Zfp652-ps1 | zinc finger protein 652, pseudogene 1 | | 5 | 17872510 | 17899024 | Rat | n/a | Region | gene |
| 918 | 11453663 | LOC108350924 | uncharacterized LOC108350924 | | 5 | 18041011 | 18060823 | Rat | n/a | Region | gene |
| 917 | 6502160 | Ppid-ps3 | peptidylprolyl isomerase D, pseudogene 3 | | 5 | 18528782 | 18540240 | Rat | n/a | Region | gene |
| 916 | 1586146 | Rgs20 | regulator of G-protein signaling 20 | | 5 | 14484436 | 14614317 | Rat | n/a | Region | gene |
| 915 | 9196141 | Son-ps1 | SON DNA and RNA binding protein, pseudogene 1 | | 5 | 18469476 | 18473456 | Rat | n/a | Region | gene |