| 1000 | 1312165 | Rabgap1l | RAB GTPase activating protein 1-like | | 1 | 160046744 | 160621046 | Mouse | n/a | Region | gene |
| 999 | 329969331 | LOC131296622 | STARR-seq mESC enhancer starr_02805 | | 1 | 160323470 | 160324929 | Mouse | n/a | Region | gene |
| 998 | 1622603 | Gpr52 | G protein-coupled receptor 52 | | 1 | 160402287 | 160407274 | Mouse | n/a | Region | gene |
| 997 | 329968823 | LOC131296623 | STARR-seq mESC enhancer starr_02807 | | 1 | 160451766 | 160454242 | Mouse | n/a | Region | gene |
| 996 | 15001911 | Gm23528 | predicted gene, 23528 | | 1 | 160473143 | 160473274 | Mouse | n/a | Region | gene |
| 995 | 329965533 | LOC131296624 | STARR-seq mESC enhancer starr_02810 | | 1 | 160561715 | 160563432 | Mouse | n/a | Region | gene |
| 994 | 15001018 | Gm37083 | predicted gene, 37083 | | 1 | 160619465 | 160661067 | Mouse | n/a | Region | gene |
| 993 | 401837580 | LOC132408233 | STARR-positive B cell enhancer mm9_chr1:162722911-162723212 | | 1 | 160620350 | 160620651 | Mouse | n/a | Region | gene |
| 992 | 401839298 | LOC132408234 | STARR-positive B cell enhancer ABC_E7764 | | 1 | 160621968 | 160622269 | Mouse | n/a | Region | gene |
| 991 | 401838300 | LOC132408235 | STARR-positive B cell enhancer ABC_E5833 | | 1 | 160687414 | 160687715 | Mouse | n/a | Region | gene |
| 990 | 401833110 | LOC132408236 | STARR-positive B cell enhancer ABC_E8983 | | 1 | 160688737 | 160689037 | Mouse | n/a | Region | gene |
| 989 | 15002612 | Gm24988 | predicted gene, 24988 | | 1 | 160703772 | 160703892 | Mouse | n/a | Region | gene |
| 988 | 1618663 | Gm6177 | predicted gene 6177 | | 1 | 160720678 | 160721204 | Mouse | n/a | Region | gene |
| 987 | 401836554 | LOC132408237 | STARR-positive B cell enhancer mm9_chr1:162836371-162836672 | | 1 | 160733810 | 160734111 | Mouse | n/a | Region | gene |
| 986 | 1557447 | Rc3h1 | RING CCCH (C3H) domains 1 | | 1 | 160733981 | 160802546 | Mouse | n/a | Region | gene |
| 985 | 1316584 | Serpinc1 | serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 | | 1 | 160806153 | 160830113 | Mouse | n/a | Region | gene |
| 984 | 39129001 | Gm57574 | predicted gene, 57574 | | 1 | 160807973 | 160808110 | Mouse | n/a | Region | gene |
| 983 | 1550237 | Zbtb37 | zinc finger and BTB domain containing 37 | | 1 | 160830492 | 160862432 | Mouse | n/a | Region | gene |
| 982 | 737110 | Gas5 | growth arrest specific 5 | | 1 | 160862171 | 160866109 | Mouse | n/a | Region | gene |
| 981 | 401832924 | LOC132408238 | STARR-positive B cell enhancer mm9_chr1:162964993-162965294 | | 1 | 160862432 | 160862733 | Mouse | n/a | Region | gene |
| 980 | 15554207 | Gm26224 | predicted gene, 26224 | | 1 | 160862964 | 160863043 | Mouse | n/a | Region | gene |
| 979 | 15554684 | Gm22489 | predicted gene, 22489 | | 1 | 160863420 | 160863481 | Mouse | n/a | Region | gene |
| 978 | 15554241 | Gm22357 | predicted gene, 22357 | | 1 | 160863627 | 160863709 | Mouse | n/a | Region | gene |
| 977 | 15555563 | Gm23212 | predicted gene, 23212 | | 1 | 160864252 | 160864311 | Mouse | n/a | Region | gene |
| 976 | 15554512 | Snord78 | small nucleolar RNA, C/D box 78 | | 1 | 160864554 | 160864619 | Mouse | n/a | Region | gene |
| 975 | 15554310 | Snord80 | small nucleolar RNA, C/D box 80 | | 1 | 160865171 | 160865251 | Mouse | n/a | Region | gene |
| 974 | 2302609 | Snord47 | small nucleolar RNA, C/D box 47 | | 1 | 160865662 | 160865726 | Mouse | n/a | Region | gene |
| 973 | 15554275 | Gm25789 | predicted gene, 25789 | | 1 | 160865878 | 160865953 | Mouse | n/a | Region | gene |
| 972 | 1550719 | Dars2 | aspartyl-tRNA synthetase 2 (mitochondrial) | | 1 | 160868171 | 160898236 | Mouse | n/a | Region | gene |
| 971 | 163682590 | LOC128924384 | CapStarr-seq enhancer MGSCv37_chr1:163000837-163001115 | | 1 | 160898138 | 160898554 | Mouse | n/a | Region | gene |
| 970 | 1323549 | Cenpl | centromere protein L | | 1 | 160898337 | 160914294 | Mouse | n/a | Region | gene |
| 969 | 401832350 | LOC132408239 | STARR-positive B cell enhancer ABC_E11097 | | 1 | 160903857 | 160904157 | Mouse | n/a | Region | gene |
| 968 | 1550848 | Klhl20 | kelch-like 20 | | 1 | 160915945 | 160959078 | Mouse | n/a | Region | gene |
| 967 | 163689810 | LOC128924385 | CapStarr-seq enhancer MGSCv37_chr1:163061431-163061751 | | 1 | 160958870 | 160959332 | Mouse | n/a | Region | gene |
| 966 | 329964519 | LOC131296625 | STARR-seq mESC enhancer starr_02813 | | 1 | 160966932 | 160968783 | Mouse | n/a | Region | gene |
| 965 | 1551926 | Ankrd45 | ankyrin repeat domain 45 | | 1 | 160970017 | 160998077 | Mouse | n/a | Region | gene |
| 964 | 329969011 | LOC131296626 | STARR-seq mESC enhancer starr_02814 | | 1 | 160972921 | 160975367 | Mouse | n/a | Region | gene |
| 963 | 329966622 | LOC131296627 | STARR-seq mESC enhancer starr_02815 | | 1 | 160978375 | 160979361 | Mouse | n/a | Region | gene |
| 962 | 1617476 | Tex50 | testis expressed 50 | | 1 | 160984413 | 160986883 | Mouse | n/a | Region | gene |
| 961 | 329967881 | LOC131296628 | STARR-seq mESC enhancer starr_02817 | | 1 | 160987227 | 160988716 | Mouse | n/a | Region | gene |
| 960 | 15018246 | Gm51252 | predicted gene, 51252 | | 1 | 160998220 | 160999752 | Mouse | n/a | Region | gene |
| 959 | 1617869 | Gm6185 | predicted gene 6185 | | 1 | 161006274 | 161062743 | Mouse | n/a | Region | gene |
| 958 | 736132 | Prdx6 | peroxiredoxin 6 | | 1 | 161067682 | 161078780 | Mouse | n/a | Region | gene |
| 957 | 329963475 | LOC131296629 | STARR-seq mESC enhancer starr_02818 | | 1 | 161074682 | 161078292 | Mouse | n/a | Region | gene |
| 956 | 401838207 | LOC132408240 | STARR-positive B cell enhancer ABC_E9490 | | 1 | 161078619 | 161078919 | Mouse | n/a | Region | gene |
| 955 | 401834691 | LOC132408241 | STARR-positive B cell enhancer ABC_E5834 | | 1 | 161079080 | 161079381 | Mouse | n/a | Region | gene |
| 954 | 329963369 | LOC131296630 | STARR-seq mESC enhancer starr_02820 | | 1 | 161098167 | 161099748 | Mouse | n/a | Region | gene |
| 953 | 5142496 | Gm19057 | predicted gene, 19057 | | 1 | 161125404 | 161126476 | Mouse | n/a | Region | gene |
| 952 | 329967443 | LOC131296631 | STARR-seq mESC enhancer starr_02821 | | 1 | 161127250 | 161129775 | Mouse | n/a | Region | gene |
| 951 | 329968302 | LOC131296632 | STARR-seq mESC enhancer starr_02822 | | 1 | 161143151 | 161144895 | Mouse | n/a | Region | gene |
| 950 | 733125 | Tnfsf4 | tumor necrosis factor (ligand) superfamily, member 4 | | 1 | 161223009 | 161245777 | Mouse | n/a | Region | gene |
| 949 | 329966730 | LOC131296633 | STARR-seq mESC enhancer starr_02823 | | 1 | 161223189 | 161226387 | Mouse | n/a | Region | gene |
| 948 | 329968249 | LOC131296634 | STARR-seq mESC enhancer starr_02824 | | 1 | 161239193 | 161240053 | Mouse | n/a | Region | gene |
| 947 | 329962180 | LOC131296635 | STARR-seq mESC enhancer starr_02825 | | 1 | 161269841 | 161273105 | Mouse | n/a | Region | gene |
| 946 | 1312876 | Tnfsf18 | tumor necrosis factor (ligand) superfamily, member 18 | | 1 | 161322221 | 161333903 | Mouse | n/a | Region | gene |
| 945 | 401832734 | LOC132408242 | STARR-positive B cell enhancer mm9_chr1:163430931-163431231 | | 1 | 161328369 | 161328669 | Mouse | n/a | Region | gene |
| 944 | 9599926 | Gm31815 | predicted gene, 31815 | | 1 | 161342825 | 161419027 | Mouse | n/a | Region | gene |
| 943 | 329962508 | LOC131296636 | STARR-seq mESC enhancer starr_02826 | | 1 | 161350952 | 161352729 | Mouse | n/a | Region | gene |
| 942 | 1622640 | Gm5704 | predicted gene 5704 | | 1 | 161424471 | 161426251 | Mouse | n/a | Region | gene |
| 941 | 329969464 | LOC131296637 | STARR-seq mESC enhancer starr_02828 | | 1 | 161499079 | 161500352 | Mouse | n/a | Region | gene |
| 940 | 401838752 | LOC132408243 | STARR-positive B cell enhancer ABC_E5835 | | 1 | 161521376 | 161521677 | Mouse | n/a | Region | gene |
| 939 | 2295621 | Gm15429 | predicted pseudogene 15429 | | 1 | 161553105 | 161555260 | Mouse | n/a | Region | gene |
| 938 | 401836349 | LOC132408244 | STARR-positive B cell enhancer ABC_E5836 | | 1 | 161564441 | 161564742 | Mouse | n/a | Region | gene |
| 937 | 2310782 | Gm5049 | predicted gene 5049 | | 1 | 161573608 | 161575358 | Mouse | n/a | Region | gene |
| 936 | 401834898 | LOC132408245 | STARR-positive B cell enhancer ABC_E5837 | | 1 | 161575793 | 161576094 | Mouse | n/a | Region | gene |
| 935 | 9669812 | Gm31869 | predicted gene, 31869 | | 1 | 161589970 | 161595071 | Mouse | n/a | Region | gene |
| 934 | 401834666 | LOC132408246 | STARR-positive B cell enhancer ABC_E7765 | | 1 | 161594216 | 161594517 | Mouse | n/a | Region | gene |
| 933 | 329965296 | LOC131296638 | STARR-seq mESC enhancer starr_02829 | | 1 | 161596411 | 161597820 | Mouse | n/a | Region | gene |
| 932 | 1553064 | Fasl | Fas ligand | | 1 | 161608260 | 161616064 | Mouse | n/a | Region | gene |
| 931 | 163696819 | LOC128924386 | CapStarr-seq enhancer MGSCv37_chr1:163734643-163734826 | | 1 | 161632081 | 161632264 | Mouse | n/a | Region | gene |
| 930 | 1621340 | Suco | SUN domain containing ossification factor | | 1 | 161643681 | 161704506 | Mouse | n/a | Region | gene |
| 929 | 1617022 | Gm7496 | predicted gene 7496 | | 1 | 161649432 | 161650637 | Mouse | n/a | Region | gene |
| 928 | 401832698 | LOC132408247 | STARR-positive B cell enhancer ABC_E10050 | | 1 | 161703377 | 161703677 | Mouse | n/a | Region | gene |
| 927 | 401836728 | LOC132408248 | STARR-positive B cell enhancer ABC_E2578 | | 1 | 161704211 | 161704512 | Mouse | n/a | Region | gene |
| 926 | 401832397 | LOC132408249 | STARR-positive B cell enhancer ABC_E7766 | | 1 | 161721502 | 161721803 | Mouse | n/a | Region | gene |
| 925 | 9598144 | Gm31925 | predicted gene, 31925 | | 1 | 161723862 | 161739914 | Mouse | n/a | Region | gene |
| 924 | 329969456 | LOC131296639 | STARR-seq mESC enhancer starr_02830 | | 1 | 161734731 | 161737902 | Mouse | n/a | Region | gene |
| 923 | 1332082 | 4930558K02Rik | RIKEN cDNA 4930558K02 gene | | 1 | 161769658 | 161809940 | Mouse | n/a | Region | gene |
| 922 | 163680380 | LOC128924387 | STARR-positive B cell enhancer ABC_E4367 | | 1 | 161796503 | 161796804 | Mouse | n/a | Region | gene |
| 921 | 1322739 | Pigc | phosphatidylinositol glycan anchor biosynthesis, class C | | 1 | 161796757 | 161801029 | Mouse | n/a | Region | gene |
| 920 | 401838799 | LOC132408250 | STARR-positive B cell enhancer mm9_chr1:163906574-163906875 | | 1 | 161804012 | 161804313 | Mouse | n/a | Region | gene |
| 919 | 1557919 | Dnm3 | dynamin 3 | | 1 | 161810022 | 162305890 | Mouse | n/a | Region | gene |
| 918 | 329969875 | LOC131296640 | STARR-seq mESC enhancer starr_02833 | | 1 | 161818051 | 161819367 | Mouse | n/a | Region | gene |
| 917 | 163655612 | LOC128924388 | CapStarr-seq enhancer MGSCv37_chr1:163930050-163930233 | | 1 | 161827488 | 161827802 | Mouse | n/a | Region | gene |
| 916 | 1607460 | 2810442N19Rik | RIKEN cDNA 2810442N19 gene | | 1 | 161832538 | 161844054 | Mouse | n/a | Region | gene |