RGD:9684511 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Variant: RGD:9684511 -  Homo sapiens

RGD ID: 9684511
RS ID: rs587783373
ClinVar ID: CV167955
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: ABCC1  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 16 16,108,269
GRCh38 16 16,014,412
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NC_000016.10:g.16014412G>A
NC_000016.9:g.16108269G>A
NG_028268.2:g.69836G>A
NM_004996.3:c.352-79G>A
More... 		intron variant not provided none provided

Variant Details
Variant Transcripts
Gene Symbol:ABCC1
Accession:XM_047434147
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434152
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434135
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434142
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434132
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434140
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434154
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434138
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434148
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434131
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434136
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434149
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434141
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434146
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434151
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434145
Location:INTRON

Gene Symbol:ABCC1
Accession:NM_019862
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_017023237
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434153
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434137
Location:INTRON

Gene Symbol:ABCC1
Accession:NM_004996
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434144
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_011522497
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434134
Location:INTRON

Gene Symbol:ABCC1
Accession:XM_047434133
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV000145431 CLINVAR
dbSNP (RS) rs587783373 CLINVAR
MedGen CN517202 CLINVAR
NCBI Gene ABCC1 CLINVAR
OMIM 158343 CLINVAR