RGD:8690622 Rat Genome Database

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Variant: RGD:8690622 -  Homo sapiens

RGD ID: 8690622
RS ID: rs79481146
ClinVar ID: CV140573
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: COL5A1  
Reference Nucleotide: A
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 9 137,686,987
GRCh38 9 134,795,141
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NG_008030.1:g.158336A>T
NC_000009.12:g.134795141A>T
NC_000009.11:g.137686987A>T
NM_000093.3:c.2745+15A>T
More... 		03/15/2017 intron variant benign|likely benign AllHighlyPenetrant; EDS I; Ehlers-Danlos syndrome, classic type I; EHLERS-DANLOS SYNDROME, GRAVIS TYPE; EHLERS-DANLOS SYNDROME, SEVERE CLASSIC TYPE; Ehlers-Danlos syndrome, type 1; none provided
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:COL5A1
Accession:NM_001278074
Location:INTRON

Gene Symbol:COL5A1
Accession:NM_000093
Location:INTRON

Gene Symbol:COL5A1
Accession:XM_017014266
Location:INTRON

Variant Samples
Additional References at PubMed
PMID:25741868   PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV000124429 CLINVAR
  RCV000330504 CLINVAR
  RCV000589030 CLINVAR
  RCV002055484 CLINVAR
  RCV002269878 CLINVAR
dbSNP (RS) rs79481146 CLINVAR
MedGen C0268335 CLINVAR
  C3508773 CLINVAR
  C3661900 CLINVAR
  C5543412 CLINVAR
  CN169374 CLINVAR
NCBI Gene COL5A1 CLINVAR
OMIM 120215 CLINVAR
  130000 CLINVAR
  619329 CLINVAR
SNOMED CT 83470009 CLINVAR