RGD:8654341 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Variant: RGD:8654341 -  Homo sapiens

RGD ID: 8654341
ClinVar ID: CV130916
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: MGAT4C  
Reference Nucleotide: G
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 12 86,391,059
GRCh38 12 85,997,281
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NC_000012.12:g.85997281G>T
NC_000012.11:g.86391059G>T
NM_013244.3:c.-6-7729C>A
 intron|intron variant uncertain significance Lung cancer, somatic

Variant Details
Variant Transcripts
Gene Symbol:MGAT4C
Accession:NM_001351286
Location:5UTRS;INTRON

Gene Symbol:MGAT4C
Accession:NM_001351287
Location:5UTRS;INTRON

Gene Symbol:MGAT4C
Accession:NM_001351288
Location:5UTRS;INTRON

Gene Symbol:MGAT4C
Accession:NM_001351285
Location:5UTRS;INTRON

Gene Symbol:MGAT4C
Accession:NM_013244
Location:5UTRS;INTRON

Gene Symbol:MGAT4C
Accession:NM_001351289
Location:5UTRS;INTRON

Gene Symbol:MGAT4C
Accession:NM_001351291
Location:5UTRS;INTRON

Gene Symbol:MGAT4C
Accession:NM_001351284
Location:INTRON

Gene Symbol:MGAT4C
Accession:NM_001351282
Location:INTRON

Gene Symbol:MGAT4C
Accession:NM_001351283
Location:INTRON

Gene Symbol:MGAT4C
Accession:NR_147093
Location:INTRON;NON-CODING

Variant Samples