RGD:8652669 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Variant: RGD:8652669 -  Homo sapiens

RGD ID: 8652669
ClinVar ID: CV129244
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: ST3GAL4  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 11 126,232,886
GRCh38 11 126,362,991
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NC_000011.10:g.126362991C>T
NC_000011.9:g.126232886C>T
NM_001254757.1:c.-61+7149C>T
 intron|intron variant uncertain significance Lung cancer, somatic

Variant Details
Variant Transcripts
Gene Symbol:ST3GAL4
Accession:NM_001348400
Location:5UTRS;INTRON

Gene Symbol:ST3GAL4
Accession:NM_001254757
Location:5UTRS;INTRON

Gene Symbol:ST3GAL4
Accession:NM_006278
Location:5UTRS;INTRON

Gene Symbol:ST3GAL4
Accession:NM_001348398
Location:5UTRS;INTRON

Gene Symbol:ST3GAL4
Accession:NM_001348399
Location:5UTRS;INTRON

Gene Symbol:ST3GAL4
Accession:XM_047427426
Location:INTRON

Gene Symbol:ST3GAL4
Accession:XM_047427420
Location:INTRON

Gene Symbol:ST3GAL4
Accession:NM_001254758
Location:INTRON

Gene Symbol:ST3GAL4
Accession:NM_001254759
Location:INTRON

Gene Symbol:ST3GAL4
Accession:XM_047427424
Location:INTRON

Gene Symbol:ST3GAL4
Accession:NM_001348397
Location:INTRON

Gene Symbol:ST3GAL4
Accession:XM_047427422
Location:INTRON

Gene Symbol:ST3GAL4
Accession:NM_001348396
Location:INTRON

Gene Symbol:ST3GAL4
Accession:XM_047427423
Location:INTRON

Gene Symbol:ST3GAL4
Accession:XM_024448658
Location:INTRON

Gene Symbol:ST3GAL4
Accession:XM_047427425
Location:INTRON

Gene Symbol:ST3GAL4
Accession:XM_047427421
Location:INTRON

Gene Symbol:ST3GAL4
Accession:XM_047427418
Location:INTRON

Gene Symbol:ST3GAL4
Accession:NR_145671
Location:INTRON;NON-CODING

Variant Samples