RGD:8637790 Rat Genome Database

RGD:8637790 Rat Genome Database

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Variant: RGD:8637790 - Homo sapiens

RGD ID:

8637790

ClinVar ID:

CV93016

Genic Status:

GENIC

Type:

SNV (SO:0001483)

Associated Genes:

LOC100533997 MAGEA10

Reference Nucleotide:

C

Variant Nucleotide:

T

Position

Assembly	Chr	Position
GRCh37	X	151,303,298
GRCh38	X	152,134,826

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

ClinVar Data

HGVS Name(s)	Last Evaluated	Molecular Consequence	Clinical Significance	Trait Synonyms
NC_000023.9:g.151053954C>T NC_000023.11:g.152134826C>T NC_000023.10:g.151303298C>T NM_001011543.2:c.795G>A More...		synonymous variant\|intron variant	not provided	Malignant melanoma, somatic

Variant Details

Variant Transcripts

Gene Symbol:	LOC100533997
Accession:	NM_001204811
Location:	5UTRS;INTRON

Gene Symbol:	MAGEA10
Accession:	NM_001011543
Location:	EXON
Amino Acid Prediction:	G to G (synonymous)
Amino Acid Position:	265

Amino Acid Sequence (Calculated using NCBI transcript definition)
MPRAPKRQRCMPEEDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEEVSADDET PNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQVLPDSESLPRSEIDEKVTDLVQFLLFKYQMKEPITKAEI LESVIRNYEDHFPLLFSEASECMLLVFGIDVKEVDPTGHSFVLVTSLGLTYDGMLSDVQSMPKTGILILILSIVFIEGYC TPEEVIWEALNMMGLYDGMEHLIYGEPRKLLTQDWVQENYLEYRQVPGSDPARYEFLWGPRAHAEIRKMSLLKFLAKVNG SDPRSFPLWYEEALKDEEERAQDRIATTDDTTAMASASSSATGSFSYPE*

Gene Symbol:	MAGEA10
Accession:	NM_001251828
Location:	EXON
Amino Acid Prediction:	G to G (synonymous)
Amino Acid Position:	265

Amino Acid Sequence (Calculated using NCBI transcript definition)
MPRAPKRQRCMPEEDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEEVSADDET PNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQVLPDSESLPRSEIDEKVTDLVQFLLFKYQMKEPITKAEI LESVIRNYEDHFPLLFSEASECMLLVFGIDVKEVDPTGHSFVLVTSLGLTYDGMLSDVQSMPKTGILILILSIVFIEGYC TPEEVIWEALNMMGLYDGMEHLIYGEPRKLLTQDWVQENYLEYRQVPGSDPARYEFLWGPRAHAEIRKMSLLKFLAKVNG SDPRSFPLWYEEALKDEEERAQDRIATTDDTTAMASASSSATGSFSYPE*

Gene Symbol:	MAGEA10
Accession:	NM_021048
Location:	EXON
Amino Acid Prediction:	G to G (synonymous)
Amino Acid Position:	265

Amino Acid Sequence (Calculated using NCBI transcript definition)
MPRAPKRQRCMPEEDLQSQSETQGLEGAQAPLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEEVSADDET PNPPQSAQIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQVLPDSESLPRSEIDEKVTDLVQFLLFKYQMKEPITKAEI LESVIRNYEDHFPLLFSEASECMLLVFGIDVKEVDPTGHSFVLVTSLGLTYDGMLSDVQSMPKTGILILILSIVFIEGYC TPEEVIWEALNMMGLYDGMEHLIYGEPRKLLTQDWVQENYLEYRQVPGSDPARYEFLWGPRAHAEIRKMSLLKFLAKVNG SDPRSFPLWYEEALKDEEERAQDRIATTDDTTAMASASSSATGSFSYPE*

Variant Samples