RGD:8633945 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Variant: RGD:8633945 -  Homo sapiens

RGD ID: 8633945
ClinVar ID: CV89161
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: BMAL1  LOC124902636  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 11 13,378,470
GRCh38 11 13,356,923
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NC_000011.10:g.13356923C>T
NC_000011.9:g.13378470C>T
NC_000011.8:g.13335046C>T
NM_001030272.1:c.180-132C>T
More... 		intron|intron variant not provided Malignant melanoma, somatic

Variant Details
Variant Transcripts
Gene Symbol:BMAL1
Accession:NM_001351811
Location:5UTRS;INTRON

Gene Symbol:BMAL1
Accession:NM_001030272
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351821
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351816
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_047426955
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351813
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_047426958
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_011520105
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351812
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351818
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351807
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001178
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_011520107
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351808
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_017017738
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351824
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351823
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351820
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001297722
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351814
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351805
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351815
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351817
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001030273
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351809
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_047426954
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351819
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351810
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_047426952
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_011520109
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_017017741
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351806
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_047426953
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351822
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_047426957
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001297724
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_024448522
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_047426956
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001297719
Location:INTRON

Gene Symbol:BMAL1
Accession:XM_017017739
Location:INTRON

Gene Symbol:BMAL1
Accession:NM_001351804
Location:INTRON

Gene Symbol:BMAL1
Accession:NR_147790
Location:INTRON;NON-CODING

Gene Symbol:LOC124902636
Accession:XR_007062600
Location:INTRON;NON-CODING

Gene Symbol:BMAL1
Accession:NR_147791
Location:INTRON;NON-CODING

Gene Symbol:BMAL1
Accession:NR_147789
Location:INTRON;NON-CODING

Gene Symbol:LOC124902636
Accession:XR_007062601
Location:INTRON;NON-CODING

Gene Symbol:BMAL1
Accession:NR_147786
Location:INTRON;NON-CODING

Gene Symbol:BMAL1
Accession:NR_147788
Location:INTRON;NON-CODING

Gene Symbol:BMAL1
Accession:NR_147785
Location:INTRON;NON-CODING

Gene Symbol:BMAL1
Accession:NR_147787
Location:INTRON;NON-CODING

Variant Samples