RGD:8627386 Rat Genome Database

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Variant: RGD:8627386 -  Homo sapiens

RGD ID: 8627386
ClinVar ID: CV82530
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: CLEC4C  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 12 7,890,167
GRCh38 12 7,737,571
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NC_000012.10:g.7781434C>T
NM_203503.1:c.146G>A
NM_130441.2:c.239G>A
NC_000012.12:g.7737571C>T
More... 		stop-gain|nonsense not provided Malignant melanoma, somatic

Variant Details
Variant Transcripts
Gene Symbol:CLEC4C
Accession:NM_130441
Location:EXON
Amino Acid Prediction: W to * (nonsynonymous)
Amino Acid Position: 80
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MVPEEEPQDREKGLWWFQLKVWSMAVVSILLLSVCFTVSSVVPHNFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIED*
SCCPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTP
YNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKMKKIYI*

Gene Symbol:CLEC4C
Accession:XM_024448873
Location:EXON
Amino Acid Prediction: W to * (nonsynonymous)
Amino Acid Position: 80
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MVPEEEPQDREKGLWWFQLKVWSMAVVSILLLSVCFTVSSVVPHNFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIED*
SCCPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTP
YNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKMKKIYI*

Gene Symbol:CLEC4C
Accession:NM_203503
Location:EXON
Amino Acid Prediction: W to * (nonsynonymous)
Amino Acid Position: 49
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MVPEEEPQDRVPHNFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIED*SCCPTPWTSFQSSCYFISTGMQSWTKSQKNC
SVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTPYNENVTFWHSGEPNNLDERCAIINFRSSEEW
GWNDIHCHVPQKSICKMKKIYI*

Gene Symbol:CLEC4C
Accession:NM_001371391
Location:EXON
Amino Acid Prediction: W to * (nonsynonymous)
Amino Acid Position: 43
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MVPEEEPQDREKGLWWFQLKVWSMAVVSILLLSVCFTVSSVD*SCCPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGAD
LVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTPYNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIH
CHVPQKSICKMKKIYI*

Gene Symbol:CLEC4C
Accession:NM_001371390
Location:EXON
Amino Acid Prediction: W to * (nonsynonymous)
Amino Acid Position: 80
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MVPEEEPQDREKGLWWFQLKVWSMAVVSILLLSVCFTVSSVVPHNFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIED*
SCCPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTP
YNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKMKKIYI*
Variant Samples