RGD:8625460 Rat Genome Database

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Variant: RGD:8625460 -  Homo sapiens

RGD ID: 8625460
ClinVar ID: CV80583
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: CD96  ZBED2  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 3 111,312,581
GRCh38 3 111,593,734
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_005816.4:c.808-4386C>T
NM_198196.2:c.856-4386C>T
NG_012156.1:g.56656C>T
NC_000003.12:g.111593734C>T
More... 		intron|intron variant|synonymous variant not provided Malignant melanoma, somatic

Variant Details
Variant Transcripts
Gene Symbol:ZBED2
Accession:NM_024508
Location:EXON
Amino Acid Prediction: R to R (synonymous)
Amino Acid Position: 156
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MMRREDEEEEGTMMKAKGDLEMKEEEEISETGELVGPFVSAMPTPMPHNKGTRFSEAWEYFHLAPARAGHHPNQYATCRL
CGRQVSRGPGVNVGTTALWKHLKSMHREELEKSGHGQAGQRQDPRPHGPQLPTGIEGNWGRLLEQVGTMALWASQREKEV
LRRERAVEWRERAVEKRERALEEVERAILEMKWKVRAEKEACQREKELPAAVHPFHFV*

Gene Symbol:CD96
Accession:NM_198196
Location:INTRON

Gene Symbol:CD96
Accession:NM_001318889
Location:INTRON

Gene Symbol:
Accession:
Location:INTRON

Gene Symbol:CD96
Accession:XM_006713469
Location:INTRON

Gene Symbol:CD96
Accession:NM_005816
Location:INTRON

Gene Symbol:CD96
Accession:NM_001410800
Location:INTRON

Gene Symbol:CD96
Accession:XM_047447184
Location:INTRON

Gene Symbol:CD96
Accession:XR_007093316
Location:INTRON;NON-CODING

Gene Symbol:CD96
Accession:NR_134917
Location:INTRON;NON-CODING

Gene Symbol:CD96
Accession:XR_007093307
Location:INTRON;NON-CODING

Gene Symbol:CD96
Accession:XR_001739977
Location:INTRON;NON-CODING

Gene Symbol:CD96
Accession:XR_007093326
Location:INTRON;NON-CODING

Gene Symbol:CD96
Accession:XR_007093366
Location:INTRON;NON-CODING

Gene Symbol:CD96
Accession:XR_924090
Location:INTRON;NON-CODING

Gene Symbol:CD96
Accession:XR_007093273
Location:INTRON;NON-CODING

Gene Symbol:CD96
Accession:XR_241462
Location:INTRON;NON-CODING

Gene Symbol:CD96
Accession:XR_007093335
Location:INTRON;NON-CODING

Variant Samples