rs3788853 Rat Genome Database

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Variant: rs3788853 -  Homo sapiens

RGD ID: 8562557
RS ID: rs3788853
ClinVar ID: CV26606
Genic Status: INTERGENIC
Type: SNV (SO:0001483) 
Reference Nucleotide: C
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 X 128,870,791
GRCh38 X 129,736,814
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Clinical Significance Age of Onset Prevalence Trait Synonyms
NG_011479.1:g.2846C>A
NC_000023.11:g.129736814C>A
NC_000023.10:g.128870791C>A
 11/22/2013 risk factor adulthood 1-9 / 1 000 000|<1 / 1 000 000
Disease Annotations     Click to see Annotation Detail View

GWAS Catalog Data
GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG SNP Passing QC Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GCST90018977 Serum uric acid levels 343,836 European ancestry individuals, 129,405 East Asian ancestry individuals A NR 4E-8 7.3979400086720375 Affymetrix, Illumina [20535231] (imputed) 0.0094 uric acid measurement (EFO:0004761)
 PMID:34594039

Variant Details
Variant Samples
Additional References at PubMed
PMID:16175507   PMID:20625347   PMID:21898657  


Additional Information

Database Acc Id Source(s)
ClinVar RCV000012323 CLINVAR
dbSNP (RS) rs3788853 CLINVAR
GWAS Catalog GCST90018977 GWAS Catalog
MedGen C3806711 CLINVAR
NCBI Gene XPNPEP2 CLINVAR
OMIM 300145 CLINVAR
  300909 CLINVAR
OMIM Allele 300145.0001 CLINVAR