RGD:401865513 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

Variant: RGD:401865513 -  Homo sapiens

RGD ID: 401865513
ClinVar ID: CV2749253
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: PIDD1  
Reference Nucleotide: G
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh37 11 799,797
GRCh38 11 799,797
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_145887.4:c.2423+18C>G
NM_145886.4:c.2474+18C>G
NG_023407.1:g.3473C>G
NC_000011.10:g.799797G>C
More... 		08/11/2023 intron variant likely benign AllHighlyPenetrant

Variant Details
Variant Transcripts
Gene Symbol:PIDD1
Accession:XM_011520209
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_047427243
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_047427246
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_011520210
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_047427238
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_011520213
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_047427239
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_047427244
Location:INTRON

Gene Symbol:PIDD1
Accession:NM_145886
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_005253006
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_047427240
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_047427242
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_047427241
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_047427245
Location:INTRON

Gene Symbol:PIDD1
Accession:NM_145887
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_005253005
Location:INTRON

Gene Symbol:PIDD1
Accession:XM_011520212
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV003330451 CLINVAR
MedGen CN169374 CLINVAR
NCBI Gene PIDD1 CLINVAR
OMIM 605247 CLINVAR