RGD:28881285 Rat Genome Database

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Variant: RGD:28881285 -  Homo sapiens

RGD ID: 28881285
RS ID: rs1174889502
ClinVar ID: CV875473
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: FTO  
Reference Nucleotide: A
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 16 54,146,997
GRCh38 16 54,113,085
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001363891.1:c.*1170A>T
NM_001363894.1:c.*1170A>T
NM_001080432.3:c.*1170A>T
NM_001080432.2:c.*1170A>T
More... 		01/13/2018 3 prime utr variant uncertain significance GROWTH RETARDATION, DEVELOPMENTAL DELAY, AND FACIAL DYSMORPHISM; Growth retardation, developmental delay, coarse facies, and early death
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:FTO
Accession:NM_001363900
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363903
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363905
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363899
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363988
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363891
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363896
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363894
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001080432
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363901
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363898
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NM_001363897
Location:3UTRS;EXON

Gene Symbol:FTO
Accession:NR_156761
Location:EXON;NON-CODING

Gene Symbol:FTO
Accession:XM_017023654
Location:INTRON

Gene Symbol:FTO
Accession:XM_047434607
Location:INTRON

Gene Symbol:FTO
Accession:XM_011523315
Location:INTRON

Gene Symbol:FTO
Accession:XM_011523316
Location:INTRON

Gene Symbol:FTO
Accession:XM_024450437
Location:INTRON

Gene Symbol:FTO
Accession:XM_017023657
Location:INTRON

Gene Symbol:FTO
Accession:XM_047434606
Location:INTRON

Gene Symbol:FTO
Accession:XM_011523314
Location:INTRON

Gene Symbol:FTO
Accession:XM_047434608
Location:INTRON

Gene Symbol:FTO
Accession:XM_047434609
Location:INTRON

Gene Symbol:FTO
Accession:XM_017023656
Location:INTRON

Gene Symbol:FTO
Accession:XR_007064911
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV001117787 CLINVAR
dbSNP (RS) rs1174889502 CLINVAR
MedGen C2752001 CLINVAR
NCBI Gene FTO CLINVAR
OMIM 610966 CLINVAR
  612938 CLINVAR