RGD:28878727 Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Variant: RGD:28878727 -  Homo sapiens

RGD ID: 28878727
RS ID: rs752232600
ClinVar ID: CV865200
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: PGM1  
Reference Nucleotide: C
Variant Nucleotide: G
Position
Assembly Chr Position
GRCh37 1 64,104,348
GRCh38 1 63,638,677
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001172819.2:c.438-8C>G
NM_002633.3:c.1029-8C>G
NG_016966.1:g.50402C>G
NM_002633.2:c.1029-8C>G
More...
08/23/2021 intron variant conflicting interpretations of pathogenicity|uncertain significance CDG It; Congenital disorder of glycosylation type 1t; Glycogen storage disease XIV; GSD XIV; PGM1 DEFICIENCY; PHOSPHOGLUCOMUTASE 1 DEFICIENCY
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:PGM1
Accession:NM_001172818
Location:INTRON

Gene Symbol:PGM1
Accession:NM_001172819
Location:INTRON

Gene Symbol:PGM1
Accession:NM_002633
Location:INTRON

Variant Samples
Additional References at PubMed
PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV001096004 CLINVAR
dbSNP (RS) rs752232600 CLINVAR
MedGen C2752015 CLINVAR
NCBI Gene PGM1 CLINVAR
OMIM 171900 CLINVAR
  612934 CLINVAR
  614921 CLINVAR