RGD:28870576 Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Variant: RGD:28870576 -  Homo sapiens

RGD ID: 28870576
RS ID: rs142018904
ClinVar ID: CV882831
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: LRP2  
Reference Nucleotide: G
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh37 2 169,993,888
GRCh38 2 169,137,378
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_004525.3:c.13620+14C>G
NG_012634.1:g.230235C>G
NC_000002.12:g.169137378G>C
NC_000002.11:g.169993888G>C
More...
09/02/2021 intron variant benign|likely benign Diaphragmatic hernia exomphalos absent corpus callosum hypertelorism myopia sensorineural deafness and proteinuria; Faciooculoacousticorenal syndrome; none provided
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:LRP2
Accession:XM_047444340
Location:INTRON

Gene Symbol:LRP2
Accession:XM_011511183
Location:INTRON

Gene Symbol:LRP2
Accession:XM_011511184
Location:INTRON

Gene Symbol:LRP2
Accession:NM_004525
Location:INTRON

Variant Samples
Additional References at PubMed
PMID:25741868   PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV001131245 CLINVAR
  RCV001523463 CLINVAR
dbSNP (RS) rs142018904 CLINVAR
MedGen C1857277 CLINVAR
  C3661900 CLINVAR
NCBI Gene LRP2 CLINVAR
OMIM 222448 CLINVAR
  600073 CLINVAR