RGD:21073354 Rat Genome Database

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Variant: RGD:21073354 -  Homo sapiens

RGD ID: 21073354
RS ID: rs1603428228
ClinVar ID: CV792204
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: RPS6KA3  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 X 20,227,405
GRCh38 X 20,209,287
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NC_000023.10:g.20227405C>T
NM_004586.3:c.243+1G>A
NC_000023.11:g.20209287C>T
NG_007488.1:g.62346G>A
 05/28/2019 splice donor variant pathogenic Coffin syndrome; COFFIN-LOWRY SYNDROME, MILD; Mental retardation with osteocartilaginous abnormalities
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:RPS6KA3
Accession:XM_005274573
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_011545556
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_011545560
Location:INTRON

Gene Symbol:RPS6KA3
Accession:NM_004586
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_005274577
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_047442335
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_047442332
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_047442333
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_011545562
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_011545555
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_017029719
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_047442334
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_017029717
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_011545561
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_017029718
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_011545557
Location:INTRON

Gene Symbol:RPS6KA3
Accession:XM_047442336
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV000990501 CLINVAR
dbSNP (RS) rs1603428228 CLINVAR
MedGen C0265252 CLINVAR
NCBI Gene RPS6KA3 CLINVAR
OMIM 300075 CLINVAR
  303600 CLINVAR
SNOMED CT 15182000 CLINVAR