RGD:152166814 Rat Genome Database

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Variant: RGD:152166814 -  Homo sapiens

RGD ID: 152166814
RS ID: rs753646159
ClinVar ID: CV1666407
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: ICAM1  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 19 10,395,490
GRCh38 19 10,284,814
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_000201.3:c.1212G>A
LRG_809:g.2841G>A
NG_012083.1:g.18974G>A
NG_007728.1:g.2841G>A
More... 		02/16/2022 synonymous variant uncertain significance
Disease Annotations     Click to see Annotation Detail View
malaria  (IAGP)


Variant Details
Variant Transcripts
Gene Symbol:ICAM1
Accession:NM_000201
Location:EXON
Amino Acid Prediction: P to P (synonymous)
Amino Acid Position: 404
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MAPSSPRPALPALLVLLGALFPGPGNAQTSVSPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYE
LSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKRE
PAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLD
GLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKP
EVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDE
RDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEGTYLCRARSTQGEVTRKVTVNVLSPRYE
IVIITVVAAAVIMGTAGLSTYLYNRQRKIKKYRLQQAQKGTPMKPNTQATPP*
Variant Samples
Additional References at PubMed
PMID:25741868  


Additional Information

Database Acc Id Source(s)
ClinVar RCV002204529 CLINVAR
dbSNP (RS) rs753646159 CLINVAR
MedGen C1970028 CLINVAR
NCBI Gene ICAM1 CLINVAR
OMIM 147840 CLINVAR
  611162 CLINVAR