RGD:152145377 Rat Genome Database

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Variant: RGD:152145377 -  Homo sapiens

RGD ID: 152145377
RS ID: rs777734222
ClinVar ID: CV1576718
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: LRRK2  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 12 40,637,338
GRCh38 12 40,243,536
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_198578.4:c.707-14C>T
NG_011709.1:g.23526C>T
NC_000012.12:g.40243536C>T
NC_000012.11:g.40637338C>T
 08/14/2021 intron variant likely benign LRRK2-Related Parkinson Disease; Parkinson disease 8, susceptibility to
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:LRRK2
Accession:XM_005268629
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_011537881
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_011537877
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_024448833
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_047428278
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_017018787
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_017018786
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_047428277
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_011537882
Location:INTRON

Gene Symbol:LRRK2
Accession:NM_198578
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_047428279
Location:INTRON

Gene Symbol:LRRK2
Accession:XR_007063041
Location:INTRON;NON-CODING

Variant Samples
Additional References at PubMed
PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV002101381 CLINVAR
dbSNP (RS) rs777734222 CLINVAR
MedGen C1846862 CLINVAR
NCBI Gene LRRK2 CLINVAR
OMIM 607060 CLINVAR
  609007 CLINVAR