RGD:15164598 Rat Genome Database

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Variant: RGD:15164598 -  Homo sapiens

RGD ID: 15164598
RS ID: rs12366035
ClinVar ID: CV701858
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: VEGFB  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 11 64,004,692
GRCh38 11 64,237,220
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NP_001230662.1:p.Asp136=
NP_003368.1:p.Asp136=
NM_001243733.2:c.408C>T
NM_003377.5:c.408C>T
More... 		08/22/2018 synonymous variant benign none provided

Variant Details
Variant Transcripts
Gene Symbol:VEGFB
Accession:NM_001243733
Location:EXON
Amino Acid Prediction: D to D (synonymous)
Amino Acid Position: 136
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSPLLRRLLLAALLQLAPAQAPVSQPDAPGHQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAKQLVPSCVTVQRCGG
CCPDDGLECVPTGQHQVRMQILMIRYPSSQLGEMSLEEHSQCECRPKKKDSAVKPDSPRPLCPRCTQHHQRPDPRTCRCR
CRRRSFLRCQGRGLELNPDTCRCRKLRR*

Gene Symbol:VEGFB
Accession:NM_003377
Location:EXON
Amino Acid Prediction: D to D (synonymous)
Amino Acid Position: 136
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSPLLRRLLLAALLQLAPAQAPVSQPDAPGHQRKVVSWIDVYTRATCQPREVVVPLTVELMGTVAKQLVPSCVTVQRCGG
CCPDDGLECVPTGQHQVRMQILMIRYPSSQLGEMSLEEHSQCECRPKKKDSAVKPDRAATPHHRPQPRSVPGWDSAPGAP
SPADITHPTPAPGPSAHAAPSTTSALTPGPAAAAADAAASSVAKGGA*
Variant Samples
Additional References at PubMed
PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV000948384 CLINVAR
dbSNP (RS) rs12366035 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene VEGFB CLINVAR
OMIM 601398 CLINVAR