RGD:15116530 Rat Genome Database

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Variant: RGD:15116530 -  Homo sapiens

RGD ID: 15116530
RS ID: rs34400162
ClinVar ID: CV712143
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: GSTO2  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 10 106,035,070
GRCh38 10 104,275,312
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001191013.2:c.121G>A
NM_183239.2:c.121G>A
NM_001191014.2:c.37G>A
NM_001191015.2:c.37G>A
More...
07/06/2018 missense variant likely benign none provided

Variant Details
Variant Transcripts
Gene Symbol:GSTO2
Accession:NM_183239
Location:EXON
Amino Acid Prediction: V to I (nonsynonymous)
Amino Acid Position: 41
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGDATRTLGKGSQPPGPVPEGLIRIYSMRFCPYSHRTRLILKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQC
QLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELFCKVPHLTKECLVALRCGRECTNLKAALRQEFSNLEEILEY
QNTTFFGGTCISMIDYLLWPWFERLDVYGILDCVSHTPALRLWISAMKWDPTVCALLMDKSIFQGFLNLYFQNNPNAFDF
GLC*

Gene Symbol:GSTO2
Accession:NM_001191013
Location:EXON
Amino Acid Prediction: V to I (nonsynonymous)
Amino Acid Position: 41
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGDATRTLGKGSQPPGPVPEGLIRIYSMRFCPYSHRTRLILKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQC
QLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELFCKILEYQNTTFFGGTCISMIDYLLWPWFERLDVYGILDCV
SHTPALRLWISAMKWDPTVCALLMDKSIFQGFLNLYFQNNPNAFDFGLC*

Gene Symbol:GSTO2
Accession:NM_001191014
Location:EXON
Amino Acid Prediction: V to I (nonsynonymous)
Amino Acid Position: 13
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MRFCPYSHRTRLILKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQCQLIYESVIACEYLDDAYPGRKLFPYDPY
ERARQKMLLELFCKVPHLTKECLVALRCGRECTNLKAALRQEFSNLEEILEYQNTTFFGGTCISMIDYLLWPWFERLDVY
GILDCVSHTPALRLWISAMKWDPTVCALLMDKSIFQGFLNLYFQNNPNAFDFGLC*

Gene Symbol:GSTO2
Accession:NM_001191015
Location:EXON
Amino Acid Prediction: V to I (nonsynonymous)
Amino Acid Position: 13
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MRFCPYSHRTRLILKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQCQLIYESVIACEYLDDAYPGRKLFPYDPY
ERARQKMLLELFCKILEYQNTTFFGGTCISMIDYLLWPWFERLDVYGILDCVSHTPALRLWISAMKWDPTVCALLMDKSI
FQGFLNLYFQNNPNAFDFGLC*

Gene Symbol:GSTO2
Accession:XM_011539272
Location:EXON
Amino Acid Prediction: V to I (nonsynonymous)
Amino Acid Position: 41
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGDATRTLGKGSQPPGPVPEGLIRIYSMRFCPYSHRTRLILKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQC
QLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELFCKVPHLTKECLVALRCGRECTNLKAALRQEFSNLEEDRKK
RKFIPG*

Gene Symbol:GSTO2
Accession:XM_017015671
Location:EXON
Amino Acid Prediction: V to I (nonsynonymous)
Amino Acid Position: 41
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGDATRTLGKGSQPPGPVPEGLIRIYSMRFCPYSHRTRLILKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQC
QLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELFCKDRKKRKFIPG*

Gene Symbol:GSTO2
Accession:XM_047424577
Location:EXON
Amino Acid Prediction: V to I (nonsynonymous)
Amino Acid Position: 41
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGDATRTLGKGSQPPGPVPEGLIRIYSMRFCPYSHRTRLILKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQC
QLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELFCKVPHLTKECLVALRCGRECTNLKAALRQEFSNLEELCEP
HASPAALDISHEVGPHSLCSSHG*

Gene Symbol:GSTO2
Accession:XM_047424578
Location:EXON
Amino Acid Prediction: V to I (nonsynonymous)
Amino Acid Position: 41
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MSGDATRTLGKGSQPPGPVPEGLIRIYSMRFCPYSHRTRLILKAKDIRHEVVNINLRNKPEWYYTKHPFGHIPVLETSQC
QLIYESVIACEYLDDAYPGRKLFPYDPYERARQKMLLELFCKLCEPHASPAALDISHEVGPHSLCSSHG*

Variant Samples
Additional References at PubMed
PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV000962051 CLINVAR
dbSNP (RS) rs34400162 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene GSTO2 CLINVAR
OMIM 612314 CLINVAR