RGD:15103880 Rat Genome Database

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Variant: RGD:15103880 -  Homo sapiens

RGD ID: 15103880
RS ID: rs150192996
ClinVar ID: CV723008
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: TNFRSF10B  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 8 22,900,733
GRCh38 8 23,043,220
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NC_000008.11:g.23043220G>A
NC_000008.10:g.22900733G>A
NM_147187.2:c.168C>T
NP_003833.4:p.Ile56=
More... 		07/18/2018 synonymous variant likely benign none provided

Variant Details
Variant Transcripts
Gene Symbol:TNFRSF10B
Accession:NM_003842
Location:EXON
Amino Acid Prediction: I to I (synonymous)
Amino Acid Position: 56
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MEQRGQNAPAASGARKRHGPGPREARGARPGPRVPKTLVLVVAAVLLLVSAESALITQQDLAPQQRAAPQQKRSSPSEGL
CPPGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCDSGEVELSPCTTTRNTVCQCEEGTFREEDSPEMCRKCRTGC
PRGMVKVGDCTPWSDIECVHKESGTKHSGEVPAVEETVTSSPGTPASPCSLSGIIIGVTVAAVVLIVAVFVCKSLLWKKV
LPYLKGICSGGGGDPERVDRSSQRPGAEDNVLNEIVSILQPTQVPEQEMEVQEPAEPTGVNMLSPGESEHLLEPAEAERS
QRRRLLVPANEGDPTETLRQCFDDFADLVPFDSWEPLMRKLGLMDNEIKVAKAEAAGHRDTLYTMLIKWVNKTGRDASVH
TLLDALETLGERLAKQKIEDHLLSSGKFMYLEGNADSAMS*

Gene Symbol:TNFRSF10B
Accession:NM_147187
Location:EXON
Amino Acid Prediction: I to I (synonymous)
Amino Acid Position: 56
Amino Acid Sequence
(Calculated using NCBI transcript definition)
MEQRGQNAPAASGARKRHGPGPREARGARPGPRVPKTLVLVVAAVLLLVSAESALITQQDLAPQQRAAPQQKRSSPSEGL
CPPGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCDSGEVELSPCTTTRNTVCQCEEGTFREEDSPEMCRKCRTGC
PRGMVKVGDCTPWSDIECVHKESGIIIGVTVAAVVLIVAVFVCKSLLWKKVLPYLKGICSGGGGDPERVDRSSQRPGAED
NVLNEIVSILQPTQVPEQEMEVQEPAEPTGVNMLSPGESEHLLEPAEAERSQRRRLLVPANEGDPTETLRQCFDDFADLV
PFDSWEPLMRKLGLMDNEIKVAKAEAAGHRDTLYTMLIKWVNKTGRDASVHTLLDALETLGERLAKQKIEDHLLSSGKFM
YLEGNADSAMS*

Gene Symbol:TNFRSF10B
Accession:NR_027140
Location:INTRON;NON-CODING

Variant Samples
Additional References at PubMed
PMID:25741868   PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV000892768 CLINVAR
  RCV003950412 CLINVAR
dbSNP (RS) rs150192996 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene TNFRSF10B CLINVAR
OMIM 603612 CLINVAR