RGD:150508919 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Variant: RGD:150508919 -  Homo sapiens

RGD ID: 150508919
RS ID: rs12975235
ClinVar ID: CV1284404
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: CPAMD8  
Reference Nucleotide: T
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 19 17,088,458
GRCh38 19 16,977,648
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_015692.5:c.1586-108C>T
NG_054892.1:g.54171C>T
NC_000019.10:g.16977648G>A
NC_000019.9:g.17088458G>A
 05/11/2021 intron variant benign none provided

Variant Details
Variant Transcripts
Gene Symbol:CPAMD8
Accession:XM_017026594
Location:INTRON

Gene Symbol:CPAMD8
Accession:NM_015692
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_011527921
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_011527920
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_047438612
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_011527924
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_011527925
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_011527919
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_011527922
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_047438614
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_011527918
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_011527923
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_047438613
Location:INTRON

Gene Symbol:CPAMD8
Accession:XM_011527917
Location:INTRON

Gene Symbol:CPAMD8
Accession:NR_165644
Location:INTRON;NON-CODING

Gene Symbol:CPAMD8
Accession:NR_147452
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV001720512 CLINVAR
dbSNP (RS) rs12975235 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene CPAMD8 CLINVAR
OMIM 608841 CLINVAR