RGD:150486875 Rat Genome Database

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Variant: RGD:150486875 -  Homo sapiens

RGD ID: 150486875
RS ID: rs2270536
ClinVar ID: CV1225814
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: GPSM2  
Reference Nucleotide: A
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 1 109,444,370
GRCh38 1 108,901,748
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
LRG_1373t1:c.798-42A>T
NM_001321038.2:c.798-42A>T
NM_001321039.3:c.798-42A>T
NM_013296.5:c.798-42A>T
More... 		06/24/2018 intron variant benign none provided

Variant Details
Variant Transcripts
Gene Symbol:GPSM2
Accession:NM_001321039
Location:INTRON

Gene Symbol:GPSM2
Accession:XM_006710589
Location:INTRON

Gene Symbol:GPSM2
Accession:NM_001321038
Location:INTRON

Gene Symbol:GPSM2
Accession:XM_017001098
Location:INTRON

Gene Symbol:GPSM2
Accession:NM_013296
Location:INTRON

Gene Symbol:GPSM2
Accession:XM_011541303
Location:INTRON

Gene Symbol:GPSM2
Accession:XM_011541302
Location:INTRON

Gene Symbol:GPSM2
Accession:XM_047418724
Location:INTRON

Gene Symbol:GPSM2
Accession:XM_017001097
Location:INTRON

Gene Symbol:GPSM2
Accession:XM_047418723
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV001617975 CLINVAR
dbSNP (RS) rs2270536 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene GPSM2 CLINVAR
OMIM 609245 CLINVAR